Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055489
CDS Infomation

pacid=37456404 polypeptide=PGSC0003DMP400037350 locus=PGSC0003DMG402021549 ID=PGSC0003DMT400055489.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTCTTATGTCAAGGCAGCTCAGAAGCTCCATGAAATGGGATCCTCTTCAAAAA
CCAAAGCAAGATCGTTATGCTCTCCGAACATCTCCACAGTGGCTTGGCCCTCAAATTGAA
GTCATCCGTGCAGCAACTAAGATGATCGAGAGGGAGATTAACTCAGTGAACGACAACCCA
TTGATCGACGTTTCAAGAAACAAGGCCTTACATGGTGGCAACTTCCAAGGTACCCCTATT
GGTGTCTCCATGGATAATACAAGATTGGCCCTTGCATCAATTGGGAAATTGATGTTTGCC
CAATTTTCGGAACTTGTCAACGACTATTACAACAATGGGCTGCCATCTAATCTCACAGCA
GGAAGGAATCCAAGCTTGGACTATGGACTCAAGGGAGCTGAAATTGCAATGGCTTCTTAC
TGCTCGGAACTTCAATTTTTGGCAAATCCAGTGACTAACCATGTCCAAAGTGCTGAGCAA
CACAACCAAGATGTGAATTCATTGGGCTTAATCTCAGCAAGGAAAACCGCTGAGGCTGTT
GACATCTTGAAGCTAATGTCATCAACCTATCTCGTGGCGCTTTGCCAAGCTATTGACTTA
AGGCATTTGGAGGAAAACTTGAGGAATGCTGTCAAGAACACAGTGAGCCAAGTAGCTAAG
AGAACTTTGACAATGGGTGCTAATGGTGAACTTCATCCTGCAAGATTCTGCGAGAAGGAA
TTGCTTCGAGTCGTGGACAGGGAATACGTGTTTGCCTATGCTGATGATCCCTGCAGTTCA
ACCTACCCTTTGATGCAGAAGCTGAGACAAGTCCTTGTTGATCATGCAATGAAGAATGGT
GAAAGTGAGAAGAATGTGAACAGCTCAATCTTCCAAAAGATTGTAGCTTTCGAGGACGAA
TTGAAGGCTGTGTTGCCTAAAGAAGTTGAGAGTGCAAGAGCTATGCTTGAAAGTGGCAAC
CCTGTAATTCCTAACAGGATAACAGAATGCAGATCATATCCATTGTACAGGTTGGTGAGA
CAAGAACTTGGATCAGAACTGTTGACAGGTGAAAAAGTTCGATCGCCCGGTGAGGAGATT
GACAAGGTGTTCACAGCAATGTGCAATGGACAGATTATTGATCCATTGTTGGAGTGTCTC
AAGAGCTGGAATGGTGCTCCTCTTCCAATCTGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037350
PEP Infomation

pacid=37456404 transcript=PGSC0003DMT400055489 locus=PGSC0003DMG402021549 ID=PGSC0003DMT400055489.v4.03 annot-version=v4.03
Sequence

MAALMSRQLRSSMKWDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNP
LIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDYYNNGLPSNLTA
GRNPSLDYGLKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAV
DILKLMSSTYLVALCQAIDLRHLEENLRNAVKNTVSQVAKRTLTMGANGELHPARFCEKE
LLRVVDREYVFAYADDPCSSTYPLMQKLRQVLVDHAMKNGESEKNVNSSIFQKIVAFEDE
LKAVLPKEVESARAMLESGNPVIPNRITECRSYPLYRLVRQELGSELLTGEKVRSPGEEI
DKVFTAMCNGQIIDPLLECLKSWNGAPLPIC*

Transcript Sequence

Transcript ID

PGSC0003DMT400055489
Transcript Infomation

pacid=37456404 locus=PGSC0003DMG402021549 ID=PGSC0003DMT400055489.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTCTTATGTCAAGGCAGCTCAGAAGCTCCATGAAATGGGATCCTCTTCAAAAA
CCAAAGCAAGATCGTTATGCTCTCCGAACATCTCCACAGTGGCTTGGCCCTCAAATTGAA
GTCATCCGTGCAGCAACTAAGATGATCGAGAGGGAGATTAACTCAGTGAACGACAACCCA
TTGATCGACGTTTCAAGAAACAAGGCCTTACATGGTGGCAACTTCCAAGGTACCCCTATT
GGTGTCTCCATGGATAATACAAGATTGGCCCTTGCATCAATTGGGAAATTGATGTTTGCC
CAATTTTCGGAACTTGTCAACGACTATTACAACAATGGGCTGCCATCTAATCTCACAGCA
GGAAGGAATCCAAGCTTGGACTATGGACTCAAGGGAGCTGAAATTGCAATGGCTTCTTAC
TGCTCGGAACTTCAATTTTTGGCAAATCCAGTGACTAACCATGTCCAAAGTGCTGAGCAA
CACAACCAAGATGTGAATTCATTGGGCTTAATCTCAGCAAGGAAAACCGCTGAGGCTGTT
GACATCTTGAAGCTAATGTCATCAACCTATCTCGTGGCGCTTTGCCAAGCTATTGACTTA
AGGCATTTGGAGGAAAACTTGAGGAATGCTGTCAAGAACACAGTGAGCCAAGTAGCTAAG
AGAACTTTGACAATGGGTGCTAATGGTGAACTTCATCCTGCAAGATTCTGCGAGAAGGAA
TTGCTTCGAGTCGTGGACAGGGAATACGTGTTTGCCTATGCTGATGATCCCTGCAGTTCA
ACCTACCCTTTGATGCAGAAGCTGAGACAAGTCCTTGTTGATCATGCAATGAAGAATGGT
GAAAGTGAGAAGAATGTGAACAGCTCAATCTTCCAAAAGATTGTAGCTTTCGAGGACGAA
TTGAAGGCTGTGTTGCCTAAAGAAGTTGAGAGTGCAAGAGCTATGCTTGAAAGTGGCAAC
CCTGTAATTCCTAACAGGATAACAGAATGCAGATCATATCCATTGTACAGGTTGGTGAGA
CAAGAACTTGGATCAGAACTGTTGACAGGTGAAAAAGTTCGATCGCCCGGTGAGGAGATT
GACAAGGTGTTCACAGCAATGTGCAATGGACAGATTATTGATCCATTGTTGGAGTGTCTC
AAGAGCTGGAATGGTGCTCCTCTTCCAATCTGCTAA