Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055484
CDS Infomation

pacid=37456559 polypeptide=PGSC0003DMP400037346 locus=PGSC0003DMG400021547 ID=PGSC0003DMT400055484.v4.03 annot-version=v4.03
Sequence

ATGCTTCAGCGAGTACTTTCTGCTTCTGTGCCAATGCTGCTGATTGCAGTTGGCTATGTT
GATCCTGGGAAATGGGCTGCAATGGTTGATGGAGGAGCCCGGTTTGGGTTTGATTTGGTC
ATGCTAGTACTCTTGTTCAATTTTGCTGCCATTCTGTGCCAGTATCTGTCTGCTTGTATA
GCCTTGGTTACAGACCGAGATCTTGCGCAGATTTGCAGTGAAGAATATGACAAAGTTACA
TGCATATTCCTAGGAATTCAAGCTGAGGTTTCGATGATTGCTTTGGACCTCACAATGGTT
TTGGGGACTGCACATGGGCTTAATGTTGTGTTTGGAATTGACCTGTTTAGCTGTGTTTTT
CTGACTGCAACCGGTGCCATTTTGTTTCCACTGCTTGCTTCTCTCTTTGACAATGGCAGT
GCAAAATTCTTATGTGTTGGCTGGGCAAGCTCTGTACTGCTCTCTTATGTTTTTGGAGTG
GTCATAACTCAACCTGAAACTCCATTCTCCATTGGTGGTATGCTGAATAAGTTTAGTGGA
GAGAGTGCATTTGCATTGATGAGTCTTCTTGGAGCAAGTATTATGCCTCACAATTTTTAC
CTCCATTCTTCTATTGTACAGCAAGGTAAGGAATCAACAGAGCTTTCCAGGGGAGCTCTG
TGTCAGGACCATTTTTTTGCCATTGTTTTCATATTCAGTGGCATTTTCCTGGTCAACTAT
GCCGCGATGAATTCAGCAGCCAATGTGTCTTATAGTACTGGCCTTTTGTTGCTGACATTT
CAGGACACATTGTCATTGCTCGATCAGGTGTTCAGAAGCTCAGTAGCACCATTCACCATA
ATGCTGGTTACATTTATTTCCAATCAAGTTACACCACTAACTTGGGATCTTGGTAGACAA
GCAGTTGTGCATGACTTATTTGGAATGGACATCCCAGGCTGGCTTCATCATGTGACGATC
AGAGTTATTTCCATTGTCCCAGCCCTTTATTGTGTATGGAATTCAGGAGCTGAAGGCCTA
TATCAGTTACTAATATTAACACAGGTTGTGGTAGCTCTTGTGCTTCCATCTTCTGTCATA
CCCCTGTTCAGAGTTGCTTCTTCCAGATCAATTATGGGTATTCACAAAATTTCTCAGTTA
ATGGAGTTCTTATCTCTTGGCACATTTATTGGCTTACTTGGCCTAAAGATTATATTTGTC
ATAGAGATGATATTTGGAAATAGTGATTGGGTTAATAATTTAAAGTGGACTATTGGGAGT
AGTGTGTCTACTCCATATGTTTTTCTCCTCATTGCAGCCTCTTTATCTCTTTGTCTGATG
CTGTGGTTAGCAGTTACTCCACTGAAATCTGCAAGTTCCAGGTTCGATGCTCAGGCATTT
CTGCAAACGCCTATGCCTGAGCCATATTTAGAGTGTAATCAACTTGGTGCGAGTAATACT
ATGTTTGGTCTAGTAGAAGGGTCCTCCCAAAAGCAAGAAGGTGCATTTCATGTGGATAAA
TCCTTGGTAAGCCATCCAGATTTATCAACTAAAGATCTTGATCAACTCTTGCCAGAATCA
CTCTTGGATTTTGAAAAGGTCCATCATTTGGCTACTATTGATGAGAGCAAATCTGAAACA
ACATTTTCAGCTCCTGCTGTCGGTCATCCTGAGGTATCTGTATCAGCAGGAGCAAGTTCC
GGTGTGAAAAGTGTTTGTAATGAGGTGTCTGGTGTTGTATCTGTGGATACCAGTGTCTTC
AATACTGAATCTGTGGATGTCGTAGAGAAGACTCTCAGAATTGAAGGGGACATAGCAAAT
GACAGGGATGATGGAGATTCGTGGGAGGAGCCTGAAGAGGCAATCAAAGGAGTATCTGAG
AACACTCAATCTTTTATTTCTGATGGTCCGGGGTCATACAAAAGTCTAAGTGGAAAACTA
GAGGACATGGGGAGTGGTACGGGAAGTCTATCAAGATTAGCAGGTCTTGGTCGCGCAGCT
AGGAGGCAGTTAACAGAAGCTCTAAATGAGTTTTGGGGGCAGCTTTTTGATTACCATGGC
ATGGCCACAGCAGAAGCAAAGTCCAAGAAACTGGATATAATACTTGGTCTGGATTCAAAG
ATGAGTCCAAAACCTGCCCCTGCATCATTAAAAGTGGAAAGCAGTGCGTATATTCCATCG
GGGAGTGCAAGGATACCAGAGTCTCTGATCAACTCGAATATGTACTCTCCCAAGCAGCAA
TTTGCGTCAAGCATTGTGGACTCTGCTTATAGAGTCCCAAAGGAGCCTTCTTCGACATCT
TCTATGTGGTCTAACCATATGAAATTAGTAGGTGCGTACGTGCAAAGTTCCAACAGCAAC
ATACTTGACCCAGGGGAGAGGCGCTATTCTAGTATGCGGATTCCAGCGACTTCTGCTGGC
TATGATCAGCAGCCTGCCACTGTGCATGGATATCAAATTACTGCTTACCTTAATCAACTT
GCGAAAGAAAGAGGATCTGATTATTTAAATGGGCAACTGGAGTCACCATCTCCTCGTTCT
GTATCATCACTGACGTCAAACTATGCCGAACCATTGGCTCGTGCTTCGGGGCAAAAACCC
CAGAGTGGAGTCAGTAGTCGAGCACCACCTGGTTTTGGAAATGTCCCTGTAGCCCGAAAT
AATTCCATGCAGCCCAATAACACCTCTATCGACCTTAGCTCTACTGAAACTGCTGAAAGC
GTGGCTGGCTCAGCCAACTCTAAGAAGTACTACAGCTTGCCTGATATCTCAGGGCGCTAT
GTTCCTCGCCAAGATTCTTTAGTCTCAGATGGGAGAGCTCAATGGTACAATTCCATGGGA
TTCGAACAATCTGGTGGTCGATCTACGTACGAACAAGCCTATATGAGTGGTTCACTTAGG
GCAGGTGGTCCTCAGAGGTATGAACATTCTCCTAAAGTCTGCAGAGATGCGTTCTCCTTG
CAGTACAGCTCCAATTCAGGGACTGGATCCTTGTGGTCTAGACAGCCTTTTGAGCAATTT
GGTGTAGCTGGTAAGCCAGATGTTGGTAGCGGTGATCATGGAACTGTGCAGAGTTCATCT
GCTCAGGAGAGTACATCTACGGTTGACTTGGAAGCTAAGCTGCTTCAGTCTTTCAGAAGT
TGTATTGTGAAACTTCTGAAACTGGAAGGATCTGAGTGGTTATTTAGGCAAGATGATGGG
GCTGATGAGGATCTTATAGGTCGGATTGCTGCAAGAGAGAAATTTCTCTATGAAGCTGAA
ACTAGGGAGATAAGTAGGTTGACCAACATTGGTGAATCACACTTCTCTTCCAACAGGAAA
CCTGGTTCTGCCCCAAAACCTGAAGAGATGGATTACACCAAGTTCTTGGTGATGTCAGTT
CCTCACTGTGGAGAAGGTTGTGTTTGGAAAGTAGATCTGATTGTAAGCTTCGGTGTGTGG
TGCATTCACAGAATTCTTGAGCTTTCACTTATGGAAAGTAGGCCAGAGTTGTGGGGCAAA
TATACCTATGTTCTCAACCGTCTTCAGGGCATAGTAGATCTGGCATTTTCGAAGCCCCGT
TCTCCTACGAGCCATTGTTTTTGTCTTCAAATTCCGGTTGGCCGCCAGCAAAAGGCAAGC
CCCCCTCCAATTTCAAATGGAAACTTGCCGCCACAAGCAAAACAGGGCCGAGGAAAATGC
ACGACTGCAGCAATGCTCTTAGAGATGATCAAAGACGTGGAGACGGCAATTTCCTGTCGA
AAGGGACGAACGGGCACTGCAGCAGGGGATGTAGCCTTTCCTAAAGGAAAAGAGAACCTG
GCATCCGTCCTCAAGCGCTATAAACGTCGACTATCCAATAAGCCAGTAGGAAACCAGGAG
GTGGGTGGAGTTGCTGGACCACGCAAAGTAACGCTGTCGGCCTCGTCACCCCCGTTCGTC
TTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037346
PEP Infomation

pacid=37456559 transcript=PGSC0003DMT400055484 locus=PGSC0003DMG400021547 ID=PGSC0003DMT400055484.v4.03 annot-version=v4.03
Sequence

MLQRVLSASVPMLLIAVGYVDPGKWAAMVDGGARFGFDLVMLVLLFNFAAILCQYLSACI
ALVTDRDLAQICSEEYDKVTCIFLGIQAEVSMIALDLTMVLGTAHGLNVVFGIDLFSCVF
LTATGAILFPLLASLFDNGSAKFLCVGWASSVLLSYVFGVVITQPETPFSIGGMLNKFSG
ESAFALMSLLGASIMPHNFYLHSSIVQQGKESTELSRGALCQDHFFAIVFIFSGIFLVNY
AAMNSAANVSYSTGLLLLTFQDTLSLLDQVFRSSVAPFTIMLVTFISNQVTPLTWDLGRQ
AVVHDLFGMDIPGWLHHVTIRVISIVPALYCVWNSGAEGLYQLLILTQVVVALVLPSSVI
PLFRVASSRSIMGIHKISQLMEFLSLGTFIGLLGLKIIFVIEMIFGNSDWVNNLKWTIGS
SVSTPYVFLLIAASLSLCLMLWLAVTPLKSASSRFDAQAFLQTPMPEPYLECNQLGASNT
MFGLVEGSSQKQEGAFHVDKSLVSHPDLSTKDLDQLLPESLLDFEKVHHLATIDESKSET
TFSAPAVGHPEVSVSAGASSGVKSVCNEVSGVVSVDTSVFNTESVDVVEKTLRIEGDIAN
DRDDGDSWEEPEEAIKGVSENTQSFISDGPGSYKSLSGKLEDMGSGTGSLSRLAGLGRAA
RRQLTEALNEFWGQLFDYHGMATAEAKSKKLDIILGLDSKMSPKPAPASLKVESSAYIPS
GSARIPESLINSNMYSPKQQFASSIVDSAYRVPKEPSSTSSMWSNHMKLVGAYVQSSNSN
ILDPGERRYSSMRIPATSAGYDQQPATVHGYQITAYLNQLAKERGSDYLNGQLESPSPRS
VSSLTSNYAEPLARASGQKPQSGVSSRAPPGFGNVPVARNNSMQPNNTSIDLSSTETAES
VAGSANSKKYYSLPDISGRYVPRQDSLVSDGRAQWYNSMGFEQSGGRSTYEQAYMSGSLR
AGGPQRYEHSPKVCRDAFSLQYSSNSGTGSLWSRQPFEQFGVAGKPDVGSGDHGTVQSSS
AQESTSTVDLEAKLLQSFRSCIVKLLKLEGSEWLFRQDDGADEDLIGRIAAREKFLYEAE
TREISRLTNIGESHFSSNRKPGSAPKPEEMDYTKFLVMSVPHCGEGCVWKVDLIVSFGVW
CIHRILELSLMESRPELWGKYTYVLNRLQGIVDLAFSKPRSPTSHCFCLQIPVGRQQKAS
PPPISNGNLPPQAKQGRGKCTTAAMLLEMIKDVETAISCRKGRTGTAAGDVAFPKGKENL
ASVLKRYKRRLSNKPVGNQEVGGVAGPRKVTLSASSPPFVL*

Transcript Sequence

Transcript ID

PGSC0003DMT400055484
Transcript Infomation

pacid=37456559 locus=PGSC0003DMG400021547 ID=PGSC0003DMT400055484.v4.03 annot-version=v4.03
Sequence

ATGCTTCAGCGAGTACTTTCTGCTTCTGTGCCAATGCTGCTGATTGCAGTTGGCTATGTT
GATCCTGGGAAATGGGCTGCAATGGTTGATGGAGGAGCCCGGTTTGGGTTTGATTTGGTC
ATGCTAGTACTCTTGTTCAATTTTGCTGCCATTCTGTGCCAGTATCTGTCTGCTTGTATA
GCCTTGGTTACAGACCGAGATCTTGCGCAGATTTGCAGTGAAGAATATGACAAAGTTACA
TGCATATTCCTAGGAATTCAAGCTGAGGTTTCGATGATTGCTTTGGACCTCACAATGGTT
TTGGGGACTGCACATGGGCTTAATGTTGTGTTTGGAATTGACCTGTTTAGCTGTGTTTTT
CTGACTGCAACCGGTGCCATTTTGTTTCCACTGCTTGCTTCTCTCTTTGACAATGGCAGT
GCAAAATTCTTATGTGTTGGCTGGGCAAGCTCTGTACTGCTCTCTTATGTTTTTGGAGTG
GTCATAACTCAACCTGAAACTCCATTCTCCATTGGTGGTATGCTGAATAAGTTTAGTGGA
GAGAGTGCATTTGCATTGATGAGTCTTCTTGGAGCAAGTATTATGCCTCACAATTTTTAC
CTCCATTCTTCTATTGTACAGCAAGGTAAGGAATCAACAGAGCTTTCCAGGGGAGCTCTG
TGTCAGGACCATTTTTTTGCCATTGTTTTCATATTCAGTGGCATTTTCCTGGTCAACTAT
GCCGCGATGAATTCAGCAGCCAATGTGTCTTATAGTACTGGCCTTTTGTTGCTGACATTT
CAGGACACATTGTCATTGCTCGATCAGGTGTTCAGAAGCTCAGTAGCACCATTCACCATA
ATGCTGGTTACATTTATTTCCAATCAAGTTACACCACTAACTTGGGATCTTGGTAGACAA
GCAGTTGTGCATGACTTATTTGGAATGGACATCCCAGGCTGGCTTCATCATGTGACGATC
AGAGTTATTTCCATTGTCCCAGCCCTTTATTGTGTATGGAATTCAGGAGCTGAAGGCCTA
TATCAGTTACTAATATTAACACAGGTTGTGGTAGCTCTTGTGCTTCCATCTTCTGTCATA
CCCCTGTTCAGAGTTGCTTCTTCCAGATCAATTATGGGTATTCACAAAATTTCTCAGTTA
ATGGAGTTCTTATCTCTTGGCACATTTATTGGCTTACTTGGCCTAAAGATTATATTTGTC
ATAGAGATGATATTTGGAAATAGTGATTGGGTTAATAATTTAAAGTGGACTATTGGGAGT
AGTGTGTCTACTCCATATGTTTTTCTCCTCATTGCAGCCTCTTTATCTCTTTGTCTGATG
CTGTGGTTAGCAGTTACTCCACTGAAATCTGCAAGTTCCAGGTTCGATGCTCAGGCATTT
CTGCAAACGCCTATGCCTGAGCCATATTTAGAGTGTAATCAACTTGGTGCGAGTAATACT
ATGTTTGGTCTAGTAGAAGGGTCCTCCCAAAAGCAAGAAGGTGCATTTCATGTGGATAAA
TCCTTGGTAAGCCATCCAGATTTATCAACTAAAGATCTTGATCAACTCTTGCCAGAATCA
CTCTTGGATTTTGAAAAGGTCCATCATTTGGCTACTATTGATGAGAGCAAATCTGAAACA
ACATTTTCAGCTCCTGCTGTCGGTCATCCTGAGGTATCTGTATCAGCAGGAGCAAGTTCC
GGTGTGAAAAGTGTTTGTAATGAGGTGTCTGGTGTTGTATCTGTGGATACCAGTGTCTTC
AATACTGAATCTGTGGATGTCGTAGAGAAGACTCTCAGAATTGAAGGGGACATAGCAAAT
GACAGGGATGATGGAGATTCGTGGGAGGAGCCTGAAGAGGCAATCAAAGGAGTATCTGAG
AACACTCAATCTTTTATTTCTGATGGTCCGGGGTCATACAAAAGTCTAAGTGGAAAACTA
GAGGACATGGGGAGTGGTACGGGAAGTCTATCAAGATTAGCAGGTCTTGGTCGCGCAGCT
AGGAGGCAGTTAACAGAAGCTCTAAATGAGTTTTGGGGGCAGCTTTTTGATTACCATGGC
ATGGCCACAGCAGAAGCAAAGTCCAAGAAACTGGATATAATACTTGGTCTGGATTCAAAG
ATGAGTCCAAAACCTGCCCCTGCATCATTAAAAGTGGAAAGCAGTGCGTATATTCCATCG
GGGAGTGCAAGGATACCAGAGTCTCTGATCAACTCGAATATGTACTCTCCCAAGCAGCAA
TTTGCGTCAAGCATTGTGGACTCTGCTTATAGAGTCCCAAAGGAGCCTTCTTCGACATCT
TCTATGTGGTCTAACCATATGAAATTAGTAGGTGCGTACGTGCAAAGTTCCAACAGCAAC
ATACTTGACCCAGGGGAGAGGCGCTATTCTAGTATGCGGATTCCAGCGACTTCTGCTGGC
TATGATCAGCAGCCTGCCACTGTGCATGGATATCAAATTACTGCTTACCTTAATCAACTT
GCGAAAGAAAGAGGATCTGATTATTTAAATGGGCAACTGGAGTCACCATCTCCTCGTTCT
GTATCATCACTGACGTCAAACTATGCCGAACCATTGGCTCGTGCTTCGGGGCAAAAACCC
CAGAGTGGAGTCAGTAGTCGAGCACCACCTGGTTTTGGAAATGTCCCTGTAGCCCGAAAT
AATTCCATGCAGCCCAATAACACCTCTATCGACCTTAGCTCTACTGAAACTGCTGAAAGC
GTGGCTGGCTCAGCCAACTCTAAGAAGTACTACAGCTTGCCTGATATCTCAGGGCGCTAT
GTTCCTCGCCAAGATTCTTTAGTCTCAGATGGGAGAGCTCAATGGTACAATTCCATGGGA
TTCGAACAATCTGGTGGTCGATCTACGTACGAACAAGCCTATATGAGTGGTTCACTTAGG
GCAGGTGGTCCTCAGAGGTATGAACATTCTCCTAAAGTCTGCAGAGATGCGTTCTCCTTG
CAGTACAGCTCCAATTCAGGGACTGGATCCTTGTGGTCTAGACAGCCTTTTGAGCAATTT
GGTGTAGCTGGTAAGCCAGATGTTGGTAGCGGTGATCATGGAACTGTGCAGAGTTCATCT
GCTCAGGAGAGTACATCTACGGTTGACTTGGAAGCTAAGCTGCTTCAGTCTTTCAGAAGT
TGTATTGTGAAACTTCTGAAACTGGAAGGATCTGAGTGGTTATTTAGGCAAGATGATGGG
GCTGATGAGGATCTTATAGGTCGGATTGCTGCAAGAGAGAAATTTCTCTATGAAGCTGAA
ACTAGGGAGATAAGTAGGTTGACCAACATTGGTGAATCACACTTCTCTTCCAACAGGAAA
CCTGGTTCTGCCCCAAAACCTGAAGAGATGGATTACACCAAGTTCTTGGTGATGTCAGTT
CCTCACTGTGGAGAAGGTTGTGTTTGGAAAGTAGATCTGATTGTAAGCTTCGGTGTGTGG
TGCATTCACAGAATTCTTGAGCTTTCACTTATGGAAAGTAGGCCAGAGTTGTGGGGCAAA
TATACCTATGTTCTCAACCGTCTTCAGGGCATAGTAGATCTGGCATTTTCGAAGCCCCGT
TCTCCTACGAGCCATTGTTTTTGTCTTCAAATTCCGGTTGGCCGCCAGCAAAAGGCAAGC
CCCCCTCCAATTTCAAATGGAAACTTGCCGCCACAAGCAAAACAGGGCCGAGGAAAATGC
ACGACTGCAGCAATGCTCTTAGAGATGATCAAAGACGTGGAGACGGCAATTTCCTGTCGA
AAGGGACGAACGGGCACTGCAGCAGGGGATGTAGCCTTTCCTAAAGGAAAAGAGAACCTG
GCATCCGTCCTCAAGCGCTATAAACGTCGACTATCCAATAAGCCAGTAGGAAACCAGGAG
GTGGGTGGAGTTGCTGGACCACGCAAAGTAACGCTGTCGGCCTCGTCACCCCCGTTCGTC
TTGTAA