Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055478
CDS Infomation

pacid=37474910 polypeptide=PGSC0003DMP400037342 locus=PGSC0003DMG400021542 ID=PGSC0003DMT400055478.v4.03 annot-version=v4.03
Sequence

ATGGATCAGACATTTTTGTATGCTCCTCTGCTCCTAGCTCTCTACATTATCACCAAACAT
TTTTTACGCAAATTCCATAATCATCCACCAGCTCCATTTCTAACTTTCCCAATTATTGGC
CATCTTTATCTCTTCAAAAAACCTCTTCAACGTTCCTTAGCCAAAATCTCCGATCGACAT
GGCCCTGTTCTTCTCCTCCAATTCGGTTCCCGGAAAGTTCTTCTGGTTTCATCGCCGTCG
GGAGCAGAAGAGTGTTTTACGAAGAACGATGTTGTTTTCGCAAATCGCCCTCATTTGATG
GCCGGAAAACATCTAGGTTATAATTTTACTTCGTTGGCTTGGAGTTCTTATGGAGATCAT
TGGAGAAATCTACGGAGGATTACTTCGGTTGAGATGTTTTCAACTCATCGTCTTCAAATG
CTTCACGGAATTCGTGTGGATGAAGTGAAATCTATGGTTAAGAAGATTAATTCCTCTGCT
ATGGCTGAAAAATCTGTGGATATGAAATCCATGTTTTTTGAGCTGATGTTAAATGTTATG
ATGAGGACGATTGCAGGAAAAAGGTACTACGGAGAGGATGTGGAGGATATTGAAGAAGCT
ACGAGATTCAGGGAAATGGTGCAGGAGACTTTCAGGATCGGTGGGGCGACGAATGTCGGT
GACTTTCTGCCGGCGTTGAAACTATTGGTGAGGAAATTGGAGAAAAGTTTAGTTGTGTTG
CAACAGAACAGAGATGAGTTTATGCAGGGACTGATAAAAGATTGCAGAAAGAGACTGGAG
AAAGACGGAACTGTTACTGATTCGGAGATCGAAGGGAAGAAGAAATCGTTGATTGAAGTG
TTGTTAACACTGCAAGAAAAGGAACCAGAATATTACAAAGACGAAATCATCAGAAGCCTT
ATGCTTGTACTATTAGCAGCAGGGACTGATACTTCAGTTGGGACAATGGAATGGGCTTTA
TCACTGATGTTAAACCATCCTGAAACACTGAAGAAAGCACAAGCTGAAATCGACGAACGT
ATCGGCCATGAACGTCTAATCGACGAGTCAGACATGAACAACCTACCTTACCTACGTTGC
ATTATAAACGAGACGTTCAGAATGTACCCTGCAGGACCTCTGTTAGTCCCCCACGAGTCG
TCTGAGGAGACCACTGTGGGAGGCTACCGTGTACCTGGAGGTACAATGTTGCTTGTGAAT
TTGTGGGCTATACACAACGATCCTAAGCTTTGGGATGAACCAAGAAAGTTCAAACCAGAA
AGATTTGAAGGACTAGAAGGTGTTAGAGATGGGTACAAAATGATGCCTTTTGGTTCTGGA
AGAAGGAGTTGTCCTGGAGAAGGATTGGCTGTTCGAATGGTTGCATTGTCATTGGGATGT
ATTATTCAGTGCTTTGATTGGCGACGGATTGGCGATGAATTGGTTGATATGACTGAAGGA
ACTGGACTCACCTTACCTAAAGCTCAACCCTTGGTGGCTAAGTGTAGCCCACGACCTGTA
ATGGCTAATCTTCTTTCTCAGATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400037342
PEP Infomation

pacid=37474910 transcript=PGSC0003DMT400055478 locus=PGSC0003DMG400021542 ID=PGSC0003DMT400055478.v4.03 annot-version=v4.03
Sequence

MDQTFLYAPLLLALYIITKHFLRKFHNHPPAPFLTFPIIGHLYLFKKPLQRSLAKISDRH
GPVLLLQFGSRKVLLVSSPSGAEECFTKNDVVFANRPHLMAGKHLGYNFTSLAWSSYGDH
WRNLRRITSVEMFSTHRLQMLHGIRVDEVKSMVKKINSSAMAEKSVDMKSMFFELMLNVM
MRTIAGKRYYGEDVEDIEEATRFREMVQETFRIGGATNVGDFLPALKLLVRKLEKSLVVL
QQNRDEFMQGLIKDCRKRLEKDGTVTDSEIEGKKKSLIEVLLTLQEKEPEYYKDEIIRSL
MLVLLAAGTDTSVGTMEWALSLMLNHPETLKKAQAEIDERIGHERLIDESDMNNLPYLRC
IINETFRMYPAGPLLVPHESSEETTVGGYRVPGGTMLLVNLWAIHNDPKLWDEPRKFKPE
RFEGLEGVRDGYKMMPFGSGRRSCPGEGLAVRMVALSLGCIIQCFDWRRIGDELVDMTEG
TGLTLPKAQPLVAKCSPRPVMANLLSQI*

Transcript Sequence

Transcript ID

PGSC0003DMT400055478
Transcript Infomation

pacid=37474910 locus=PGSC0003DMG400021542 ID=PGSC0003DMT400055478.v4.03 annot-version=v4.03
Sequence

ATGGATCAGACATTTTTGTATGCTCCTCTGCTCCTAGCTCTCTACATTATCACCAAACAT
TTTTTACGCAAATTCCATAATCATCCACCAGCTCCATTTCTAACTTTCCCAATTATTGGC
CATCTTTATCTCTTCAAAAAACCTCTTCAACGTTCCTTAGCCAAAATCTCCGATCGACAT
GGCCCTGTTCTTCTCCTCCAATTCGGTTCCCGGAAAGTTCTTCTGGTTTCATCGCCGTCG
GGAGCAGAAGAGTGTTTTACGAAGAACGATGTTGTTTTCGCAAATCGCCCTCATTTGATG
GCCGGAAAACATCTAGGTTATAATTTTACTTCGTTGGCTTGGAGTTCTTATGGAGATCAT
TGGAGAAATCTACGGAGGATTACTTCGGTTGAGATGTTTTCAACTCATCGTCTTCAAATG
CTTCACGGAATTCGTGTGGATGAAGTGAAATCTATGGTTAAGAAGATTAATTCCTCTGCT
ATGGCTGAAAAATCTGTGGATATGAAATCCATGTTTTTTGAGCTGATGTTAAATGTTATG
ATGAGGACGATTGCAGGAAAAAGGTACTACGGAGAGGATGTGGAGGATATTGAAGAAGCT
ACGAGATTCAGGGAAATGGTGCAGGAGACTTTCAGGATCGGTGGGGCGACGAATGTCGGT
GACTTTCTGCCGGCGTTGAAACTATTGGTGAGGAAATTGGAGAAAAGTTTAGTTGTGTTG
CAACAGAACAGAGATGAGTTTATGCAGGGACTGATAAAAGATTGCAGAAAGAGACTGGAG
AAAGACGGAACTGTTACTGATTCGGAGATCGAAGGGAAGAAGAAATCGTTGATTGAAGTG
TTGTTAACACTGCAAGAAAAGGAACCAGAATATTACAAAGACGAAATCATCAGAAGCCTT
ATGCTTGTACTATTAGCAGCAGGGACTGATACTTCAGTTGGGACAATGGAATGGGCTTTA
TCACTGATGTTAAACCATCCTGAAACACTGAAGAAAGCACAAGCTGAAATCGACGAACGT
ATCGGCCATGAACGTCTAATCGACGAGTCAGACATGAACAACCTACCTTACCTACGTTGC
ATTATAAACGAGACGTTCAGAATGTACCCTGCAGGACCTCTGTTAGTCCCCCACGAGTCG
TCTGAGGAGACCACTGTGGGAGGCTACCGTGTACCTGGAGGTACAATGTTGCTTGTGAAT
TTGTGGGCTATACACAACGATCCTAAGCTTTGGGATGAACCAAGAAAGTTCAAACCAGAA
AGATTTGAAGGACTAGAAGGTGTTAGAGATGGGTACAAAATGATGCCTTTTGGTTCTGGA
AGAAGGAGTTGTCCTGGAGAAGGATTGGCTGTTCGAATGGTTGCATTGTCATTGGGATGT
ATTATTCAGTGCTTTGATTGGCGACGGATTGGCGATGAATTGGTTGATATGACTGAAGGA
ACTGGACTCACCTTACCTAAAGCTCAACCCTTGGTGGCTAAGTGTAGCCCACGACCTGTA
ATGGCTAATCTTCTTTCTCAGATATGA