Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055477
CDS Infomation

pacid=37473775 polypeptide=PGSC0003DMP400037341 locus=PGSC0003DMG400021541 ID=PGSC0003DMT400055477.v4.03 annot-version=v4.03
Sequence

ATGGACAGTCTTTATTTGTATTTCCCAGTTCTCTTCTTTGTTCTTTACATCATCAGCTAT
CATTTTCTTCACAAGCTACAAAATCTTCCCCCTAGCCCATTTCCAGTACTCCCTTTTATT
GGCCATCTCTACTTATTGGGTAAACCTTTCCATAGAGCTTTATTCAAAGTCTCGAATCGT
TATGGTTCAGTAGTGTTTCTTCAATTTGGCTCTCGTCCTGTCCTCCTTGTTTCATCACCT
TCAGCAGCGGAAGAATGTTTTACTAAAAATGATATCATCTTTGCCAATCGTCCTGATTTT
CTTAGTGGTAAGCATTTCGGGTACAATTTTACTAGCCTTGCTTGGTCTTCCTATGGAGAG
CACTGGAGAAATCTTCGAAGAATTTCCTCTCTTGAAGTTTTATCTTCCTATAGAATCCAG
ACACTATCTAGCATCCGTTCTGATGAAATAAACTACCTGATTCGTAGACTCTTTAGAGTC
TCCATAGAGAGTTCGGAAAAAATTGTGGAGATGAAATCATCTCTTTTTAACTTCACGTTC
AATGTGCTATCGAGAATGATTGCAGGGAAAAGGTACTATGGAGAGAAAGTAGAGAACTCG
AAAGAAGCTAAGCTATTCCAGGATATATCAAAGGCTACAATAATAACAATTCCAAAGGCT
AATATTTTGGATTTCTTGCCATTTATGAGGTGGTTTGGTTTGCATGATGTTGAGGAGAAG
ATGATGGAACTACAGAAGAAGAGAGATAACTTTATGCAAAAGGAAATAGACGAGCATCGT
CGATTAAAGACCAATGGTTCTTTTCCTTCAGCAGAGGTTGTGGCAGGGAAGAAGAAAACT
ATCATGGAAGTCTTGTTAGATTTACAGAAAACAGACCCCGAGTACTACACAGATGAAACA
ATTAGAAGCCTAATGTTGGTCCTACTCCAAGCTGGATCAGATACTTCAGCTGTAACACTA
GAATGGGCTTTTTCACACTTGCTTGACAATCCAGAAATCTTAAAGACAGCGCAGACAGAA
ATTGACAATCAGGTTGGACAAGATCGCCTAATTGATGAATCCGATTTGGCTCAACTTCCA
TACATCCGATGCATCATCAATGAGACATTGCGGATGCATCCAGCAGCCCCTTTACTTGTG
CCTCACCTTTCATCAGAAGAGTGCAAGGTTGCAGGCTATCGAGTTCCGCGTGGAACAGTC
CTATTAGTGAATGCATGGGGGATACATCATGACCCTAAGGTATGGGAGGAGCCACAAAAG
TTCAATCCTGGTAGATTTTTAGGCTTTGAAGGTGTCAAAGAGGGCTGCAAGTTTATTCCA
TTTGGATCAGGAAGGAGGGGTTGCCCTGGTGAGAACCTAGCAATTCATGTCATTGGATTG
GCACTAGGCTCACTTCTTCAATGCTTTGAGTGGGATAAGCCCAATAGGGAGATCATCGAT
ATGAGTGAAGGCACTGGATTCACACTTTCACCAAAGGTTCAGCCGCTATTAGCAAAATGT
TCTCCACGACTACACATGGTTAAACTTCTTTCTGAAATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037341
PEP Infomation

pacid=37473775 transcript=PGSC0003DMT400055477 locus=PGSC0003DMG400021541 ID=PGSC0003DMT400055477.v4.03 annot-version=v4.03
Sequence

MDSLYLYFPVLFFVLYIISYHFLHKLQNLPPSPFPVLPFIGHLYLLGKPFHRALFKVSNR
YGSVVFLQFGSRPVLLVSSPSAAEECFTKNDIIFANRPDFLSGKHFGYNFTSLAWSSYGE
HWRNLRRISSLEVLSSYRIQTLSSIRSDEINYLIRRLFRVSIESSEKIVEMKSSLFNFTF
NVLSRMIAGKRYYGEKVENSKEAKLFQDISKATIITIPKANILDFLPFMRWFGLHDVEEK
MMELQKKRDNFMQKEIDEHRRLKTNGSFPSAEVVAGKKKTIMEVLLDLQKTDPEYYTDET
IRSLMLVLLQAGSDTSAVTLEWAFSHLLDNPEILKTAQTEIDNQVGQDRLIDESDLAQLP
YIRCIINETLRMHPAAPLLVPHLSSEECKVAGYRVPRGTVLLVNAWGIHHDPKVWEEPQK
FNPGRFLGFEGVKEGCKFIPFGSGRRGCPGENLAIHVIGLALGSLLQCFEWDKPNREIID
MSEGTGFTLSPKVQPLLAKCSPRLHMVKLLSEI*

Transcript Sequence

Transcript ID

PGSC0003DMT400055477
Transcript Infomation

pacid=37473775 locus=PGSC0003DMG400021541 ID=PGSC0003DMT400055477.v4.03 annot-version=v4.03
Sequence

ATGGACAGTCTTTATTTGTATTTCCCAGTTCTCTTCTTTGTTCTTTACATCATCAGCTAT
CATTTTCTTCACAAGCTACAAAATCTTCCCCCTAGCCCATTTCCAGTACTCCCTTTTATT
GGCCATCTCTACTTATTGGGTAAACCTTTCCATAGAGCTTTATTCAAAGTCTCGAATCGT
TATGGTTCAGTAGTGTTTCTTCAATTTGGCTCTCGTCCTGTCCTCCTTGTTTCATCACCT
TCAGCAGCGGAAGAATGTTTTACTAAAAATGATATCATCTTTGCCAATCGTCCTGATTTT
CTTAGTGGTAAGCATTTCGGGTACAATTTTACTAGCCTTGCTTGGTCTTCCTATGGAGAG
CACTGGAGAAATCTTCGAAGAATTTCCTCTCTTGAAGTTTTATCTTCCTATAGAATCCAG
ACACTATCTAGCATCCGTTCTGATGAAATAAACTACCTGATTCGTAGACTCTTTAGAGTC
TCCATAGAGAGTTCGGAAAAAATTGTGGAGATGAAATCATCTCTTTTTAACTTCACGTTC
AATGTGCTATCGAGAATGATTGCAGGGAAAAGGTACTATGGAGAGAAAGTAGAGAACTCG
AAAGAAGCTAAGCTATTCCAGGATATATCAAAGGCTACAATAATAACAATTCCAAAGGCT
AATATTTTGGATTTCTTGCCATTTATGAGGTGGTTTGGTTTGCATGATGTTGAGGAGAAG
ATGATGGAACTACAGAAGAAGAGAGATAACTTTATGCAAAAGGAAATAGACGAGCATCGT
CGATTAAAGACCAATGGTTCTTTTCCTTCAGCAGAGGTTGTGGCAGGGAAGAAGAAAACT
ATCATGGAAGTCTTGTTAGATTTACAGAAAACAGACCCCGAGTACTACACAGATGAAACA
ATTAGAAGCCTAATGTTGGTCCTACTCCAAGCTGGATCAGATACTTCAGCTGTAACACTA
GAATGGGCTTTTTCACACTTGCTTGACAATCCAGAAATCTTAAAGACAGCGCAGACAGAA
ATTGACAATCAGGTTGGACAAGATCGCCTAATTGATGAATCCGATTTGGCTCAACTTCCA
TACATCCGATGCATCATCAATGAGACATTGCGGATGCATCCAGCAGCCCCTTTACTTGTG
CCTCACCTTTCATCAGAAGAGTGCAAGGTTGCAGGCTATCGAGTTCCGCGTGGAACAGTC
CTATTAGTGAATGCATGGGGGATACATCATGACCCTAAGGTATGGGAGGAGCCACAAAAG
TTCAATCCTGGTAGATTTTTAGGCTTTGAAGGTGTCAAAGAGGGCTGCAAGTTTATTCCA
TTTGGATCAGGAAGGAGGGGTTGCCCTGGTGAGAACCTAGCAATTCATGTCATTGGATTG
GCACTAGGCTCACTTCTTCAATGCTTTGAGTGGGATAAGCCCAATAGGGAGATCATCGAT
ATGAGTGAAGGCACTGGATTCACACTTTCACCAAAGGTTCAGCCGCTATTAGCAAAATGT
TCTCCACGACTACACATGGTTAAACTTCTTTCTGAAATCTAA