Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055457
CDS Infomation

pacid=37471512 polypeptide=PGSC0003DMP400037329 locus=PGSC0003DMG400021533 ID=PGSC0003DMT400055457.v4.03 annot-version=v4.03
Sequence

ATGGCCGACGGCGAAGCACTCTGTGAAGCAGCTCGGAATGGTGAAATCAGCAGTATTAAA
TCTCTGATTGATTCCGGCGCCGATGTCACCTACTTTGACAAAGACGGACTTACTCCGCTG
ATGCACGCCGCCAAGGACGGCCATGCCGAGGTCGTAAAGGCTCTCCTTGATGCTGGTGCC
CCATGGAATGCCCTGTCCCCTTCTAATGTCTCCGCCGGCGACTTCGCCATGGACGCCGGT
CATCAAGAGGCCTTTGACGTTCTTCTCAATACCGCAATCCAGGCAGAATTAATCCTTGGA
ACAATTGCAAGGAAGGACAATGCCAAGGGGAACTCAGATGGGGACTATTTAGATGATAGA
GTTACTTTTAGTGAAGATAAAATTATGGACTCTGATAGTAAGGCTATTATGATGGCTTGG
GAGAAGCCATTGATGGAAGCTCATGCGAAAGCTGTCTGCTCAAATGGTGGTCACATACTG
AACATTGGATTTGGGATGGGCCTTGTAGATACCGCCATACAACAATATGCACCTTCATCA
CACACTATTATTGAAGCTCATCCAGAGGTCTATGATCGTATGATGCGTGCAGGTTGGGGT
GAGAAGGAGAATGTGAAAATCATATTTGGTCGGTGGCAAGATGTCATTTCTAAACTTGAA
ACCTATGATGGCATATTTTTTGATACTTATGGGGAGTATTATGAAGATATGCGAGAATTT
CATCAACATCTTCCTAGATTATTGAAGCCAGGTGGTATTTATTCATTTTTTAATGGTCTA
TGTGGAGGTAACCCCTTCTTTCATATCGTATACGGTCAGCTAGTCTCTCTAGAACTTGAG
AGCTTGGGATATTCTACACAGCTGATACCATTACCAGTGAAGGATTGTTTAGGTGAATCT
GTGTGGGAGGGTGTTAAACAGAAGTACTGGCAGTTAGATACGTATTACCTTCCTGTTTGT
CAGTCTATGAGCGAATCAGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400037329
PEP Infomation

pacid=37471512 transcript=PGSC0003DMT400055457 locus=PGSC0003DMG400021533 ID=PGSC0003DMT400055457.v4.03 annot-version=v4.03
Sequence

MADGEALCEAARNGEISSIKSLIDSGADVTYFDKDGLTPLMHAAKDGHAEVVKALLDAGA
PWNALSPSNVSAGDFAMDAGHQEAFDVLLNTAIQAELILGTIARKDNAKGNSDGDYLDDR
VTFSEDKIMDSDSKAIMMAWEKPLMEAHAKAVCSNGGHILNIGFGMGLVDTAIQQYAPSS
HTIIEAHPEVYDRMMRAGWGEKENVKIIFGRWQDVISKLETYDGIFFDTYGEYYEDMREF
HQHLPRLLKPGGIYSFFNGLCGGNPFFHIVYGQLVSLELESLGYSTQLIPLPVKDCLGES
VWEGVKQKYWQLDTYYLPVCQSMSESE*

Transcript Sequence

Transcript ID

PGSC0003DMT400055457
Transcript Infomation

pacid=37471512 locus=PGSC0003DMG400021533 ID=PGSC0003DMT400055457.v4.03 annot-version=v4.03
Sequence

ATGGCCGACGGCGAAGCACTCTGTGAAGCAGCTCGGAATGGTGAAATCAGCAGTATTAAA
TCTCTGATTGATTCCGGCGCCGATGTCACCTACTTTGACAAAGACGGACTTACTCCGCTG
ATGCACGCCGCCAAGGACGGCCATGCCGAGGTCGTAAAGGCTCTCCTTGATGCTGGTGCC
CCATGGAATGCCCTGTCCCCTTCTAATGTCTCCGCCGGCGACTTCGCCATGGACGCCGGT
CATCAAGAGGCCTTTGACGTTCTTCTCAATACCGCAATCCAGGCAGAATTAATCCTTGGA
ACAATTGCAAGGAAGGACAATGCCAAGGGGAACTCAGATGGGGACTATTTAGATGATAGA
GTTACTTTTAGTGAAGATAAAATTATGGACTCTGATAGTAAGGCTATTATGATGGCTTGG
GAGAAGCCATTGATGGAAGCTCATGCGAAAGCTGTCTGCTCAAATGGTGGTCACATACTG
AACATTGGATTTGGGATGGGCCTTGTAGATACCGCCATACAACAATATGCACCTTCATCA
CACACTATTATTGAAGCTCATCCAGAGGTCTATGATCGTATGATGCGTGCAGGTTGGGGT
GAGAAGGAGAATGTGAAAATCATATTTGGTCGGTGGCAAGATGTCATTTCTAAACTTGAA
ACCTATGATGGCATATTTTTTGATACTTATGGGGAGTATTATGAAGATATGCGAGAATTT
CATCAACATCTTCCTAGATTATTGAAGCCAGGTGGTATTTATTCATTTTTTAATGGTCTA
TGTGGAGGTAACCCCTTCTTTCATATCGTATACGGTCAGCTAGTCTCTCTAGAACTTGAG
AGCTTGGGATATTCTACACAGCTGATACCATTACCAGTGAAGGATTGTTTAGGTGAATCT
GTGTGGGAGGGTGTTAAACAGAAGTACTGGCAGTTAGATACGTATTACCTTCCTGTTTGT
CAGTCTATGAGCGAATCAGAATGA