Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055448
CDS Infomation

pacid=37471648 polypeptide=PGSC0003DMP400037322 locus=PGSC0003DMG400021528 ID=PGSC0003DMT400055448.v4.03 annot-version=v4.03
Sequence

ATGGTGGCTGCAGTATCAACAACAAAGCCCAATCAGAAGGTCACATCTAATGGTTTGAGT
TATCAGAATCCGAAAAGGCCGCCATTGTTGCCTTCAGAAGCTCAGAATGGACCTTCTAGA
AAACCGAAATCTAGAGAGGTTACTTCTAGGTACCTTTCGACTTCTTCTTCATCTTCTGTC
TCAACAACGTCGTCTTCGAATACTTCGACTACTTACTCTTCATCGTCTAATTCGATTGCC
TCACTGAGGACTCCATCGCCGATGGGGACTAGGACGGTTCGACCTGCTGCAACGCCGGTT
CAGAATTCCGGTTCAGTTAAACGGTCCCAGTCGGTGGACCGGAGACGACCGGTGACGCCA
GCGTCTACGGAGAAGTCTGCTGCGGCGAAGCAGCTGTTGAATTCCAGTAGGAGTTTATCT
GTTTCCTTTCAAGGTCAGTCTTTCTCTATACCTGTTAGTAAGGCAAAGCCCCCTCCTGCG
ACGAACAATATTGGAAGTGTGAGGAAGGGTACGCCGGAGAGGAGGAAAGTTACTGCGGAA
TTTGTCACGCCGGAGAGGAGGAAGGTTACTGCGGAATTTGTCACGCCGGAGAGGAAGAAA
GCTACGGCGGAATTTTTTACACCGGAGAGGAGTAAAGTTGCGGCGGAATTGAGCACACCA
GCGAGAGATCGGACTGAGAATGTCAAGACAAGTGATCAGCATAGGTGGCCAGGGAGGTCA
AAGTCACTCAATTCAAGTTTTCTGACACGAAGCATGGATTGTGGTTCTATTGACAAGCCT
AAATTTGGATCCGGAAGTGTCACTAGTTCATCAATGAAGTCGGTGATTGATATATATCAT
AGAGCTAGAATTGAAGCTAGATTGAAACCTCAAAGTGATAATGGTGAGGTCGATATGAAG
TCAGCTTATGGATCAGCTATGTCTGCTGATGCATTGGCTTCAGATAGTGAAAGTGTCTCC
TCAGGGAGTACTTCAGGTGTCCATGATGGTCCGACTGTTACTCATGGAAAAGGAGGTCCC
CGTGGTATAGTTGTGCCTGCTAGGTTTTGGCAAGAGACTAACAACAGAATCAGACGAGGG
CCAGAACTTGGTTCTTCTATGGACAATGGCAATTTGAAAACAGTGGCTTCTTCTAAGCAA
ATGGGAAACAAGAAGTTTCTGATTGATAGCCCTAGAACATCACCCCGGGTTGTCCCAGCT
TCTAGAGGTCTAGTGTCTCCTCTTCGAGGGGGTCTAAGACCAGCATCACCAAGTAAGGCA
TTGACACCATCTGCTAATACTCCTTTAAGAGGGATGCCAAGTCCTACAAGAACAAAAAAT
GGTTCCATGGTTTCAATATCTAATAATTCATGCATCATGCCCTCAATTTTGAGTTTTGCT
GCTGATGCAAGAAGAGGGAAGGTAGGGGAAAACCGGATAGTTGATGCACATGAGTTAAGG
CTTCTATATAATCGGAACCTGCAATGGCGATTTGTCAATGCACAAGCAGAAGCTGCTCTA
AGGGCACAGACAACAACAGCCGAGAGGACCCTGTACAATGCTTGGTTGACTACTTTAAAA
TTGCGGCATTCTGTGAAGTCCAAAAGAATTCAGCTGCAGCTGCTGCGGAAAAATGTGAAG
CTGCATTCCATCCTCAAAGGACAAAGGCCATGTTTGGAAAATTGGAGTATGATTGATGGA
GACCATTGCAATTCATTGTCAGGGACCATATGCGCTCTGGAAGCCAGCACTATTCGTCTC
CCTGTTGTGGAAGGAGCTAGGGCAGAAGTTCAAAATGTTAAAGATGCTATTTCTTCAGCC
GTTGACGTGATGCAGGCAATGGGATCCTCAATGTATTCTTTGCTCCCGAAGGTAGAGCAG
GTGGATTCTATGGTATGTGAGCTTGCAGATGTAGTGGCTAGCGAGCGTGCTTTACTTGAT
CAATGTAGAGATATCTTGTCATCAATGACGGCTCTACAGGTGAAGGAATGTAGCCTGAAG
ACACATTTATTACAAATAAAAGACGCGGTTTGTTGCTCAACAACAGAAGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037322
PEP Infomation

pacid=37471648 transcript=PGSC0003DMT400055448 locus=PGSC0003DMG400021528 ID=PGSC0003DMT400055448.v4.03 annot-version=v4.03
Sequence

MVAAVSTTKPNQKVTSNGLSYQNPKRPPLLPSEAQNGPSRKPKSREVTSRYLSTSSSSSV
STTSSSNTSTTYSSSSNSIASLRTPSPMGTRTVRPAATPVQNSGSVKRSQSVDRRRPVTP
ASTEKSAAAKQLLNSSRSLSVSFQGQSFSIPVSKAKPPPATNNIGSVRKGTPERRKVTAE
FVTPERRKVTAEFVTPERKKATAEFFTPERSKVAAELSTPARDRTENVKTSDQHRWPGRS
KSLNSSFLTRSMDCGSIDKPKFGSGSVTSSSMKSVIDIYHRARIEARLKPQSDNGEVDMK
SAYGSAMSADALASDSESVSSGSTSGVHDGPTVTHGKGGPRGIVVPARFWQETNNRIRRG
PELGSSMDNGNLKTVASSKQMGNKKFLIDSPRTSPRVVPASRGLVSPLRGGLRPASPSKA
LTPSANTPLRGMPSPTRTKNGSMVSISNNSCIMPSILSFAADARRGKVGENRIVDAHELR
LLYNRNLQWRFVNAQAEAALRAQTTTAERTLYNAWLTTLKLRHSVKSKRIQLQLLRKNVK
LHSILKGQRPCLENWSMIDGDHCNSLSGTICALEASTIRLPVVEGARAEVQNVKDAISSA
VDVMQAMGSSMYSLLPKVEQVDSMVCELADVVASERALLDQCRDILSSMTALQVKECSLK
THLLQIKDAVCCSTTEV*

Transcript Sequence

Transcript ID

PGSC0003DMT400055448
Transcript Infomation

pacid=37471648 locus=PGSC0003DMG400021528 ID=PGSC0003DMT400055448.v4.03 annot-version=v4.03
Sequence

ATGGTGGCTGCAGTATCAACAACAAAGCCCAATCAGAAGGTCACATCTAATGGTTTGAGT
TATCAGAATCCGAAAAGGCCGCCATTGTTGCCTTCAGAAGCTCAGAATGGACCTTCTAGA
AAACCGAAATCTAGAGAGGTTACTTCTAGGTACCTTTCGACTTCTTCTTCATCTTCTGTC
TCAACAACGTCGTCTTCGAATACTTCGACTACTTACTCTTCATCGTCTAATTCGATTGCC
TCACTGAGGACTCCATCGCCGATGGGGACTAGGACGGTTCGACCTGCTGCAACGCCGGTT
CAGAATTCCGGTTCAGTTAAACGGTCCCAGTCGGTGGACCGGAGACGACCGGTGACGCCA
GCGTCTACGGAGAAGTCTGCTGCGGCGAAGCAGCTGTTGAATTCCAGTAGGAGTTTATCT
GTTTCCTTTCAAGGTCAGTCTTTCTCTATACCTGTTAGTAAGGCAAAGCCCCCTCCTGCG
ACGAACAATATTGGAAGTGTGAGGAAGGGTACGCCGGAGAGGAGGAAAGTTACTGCGGAA
TTTGTCACGCCGGAGAGGAGGAAGGTTACTGCGGAATTTGTCACGCCGGAGAGGAAGAAA
GCTACGGCGGAATTTTTTACACCGGAGAGGAGTAAAGTTGCGGCGGAATTGAGCACACCA
GCGAGAGATCGGACTGAGAATGTCAAGACAAGTGATCAGCATAGGTGGCCAGGGAGGTCA
AAGTCACTCAATTCAAGTTTTCTGACACGAAGCATGGATTGTGGTTCTATTGACAAGCCT
AAATTTGGATCCGGAAGTGTCACTAGTTCATCAATGAAGTCGGTGATTGATATATATCAT
AGAGCTAGAATTGAAGCTAGATTGAAACCTCAAAGTGATAATGGTGAGGTCGATATGAAG
TCAGCTTATGGATCAGCTATGTCTGCTGATGCATTGGCTTCAGATAGTGAAAGTGTCTCC
TCAGGGAGTACTTCAGGTGTCCATGATGGTCCGACTGTTACTCATGGAAAAGGAGGTCCC
CGTGGTATAGTTGTGCCTGCTAGGTTTTGGCAAGAGACTAACAACAGAATCAGACGAGGG
CCAGAACTTGGTTCTTCTATGGACAATGGCAATTTGAAAACAGTGGCTTCTTCTAAGCAA
ATGGGAAACAAGAAGTTTCTGATTGATAGCCCTAGAACATCACCCCGGGTTGTCCCAGCT
TCTAGAGGTCTAGTGTCTCCTCTTCGAGGGGGTCTAAGACCAGCATCACCAAGTAAGGCA
TTGACACCATCTGCTAATACTCCTTTAAGAGGGATGCCAAGTCCTACAAGAACAAAAAAT
GGTTCCATGGTTTCAATATCTAATAATTCATGCATCATGCCCTCAATTTTGAGTTTTGCT
GCTGATGCAAGAAGAGGGAAGGTAGGGGAAAACCGGATAGTTGATGCACATGAGTTAAGG
CTTCTATATAATCGGAACCTGCAATGGCGATTTGTCAATGCACAAGCAGAAGCTGCTCTA
AGGGCACAGACAACAACAGCCGAGAGGACCCTGTACAATGCTTGGTTGACTACTTTAAAA
TTGCGGCATTCTGTGAAGTCCAAAAGAATTCAGCTGCAGCTGCTGCGGAAAAATGTGAAG
CTGCATTCCATCCTCAAAGGACAAAGGCCATGTTTGGAAAATTGGAGTATGATTGATGGA
GACCATTGCAATTCATTGTCAGGGACCATATGCGCTCTGGAAGCCAGCACTATTCGTCTC
CCTGTTGTGGAAGGAGCTAGGGCAGAAGTTCAAAATGTTAAAGATGCTATTTCTTCAGCC
GTTGACGTGATGCAGGCAATGGGATCCTCAATGTATTCTTTGCTCCCGAAGGTAGAGCAG
GTGGATTCTATGGTATGTGAGCTTGCAGATGTAGTGGCTAGCGAGCGTGCTTTACTTGAT
CAATGTAGAGATATCTTGTCATCAATGACGGCTCTACAGGTGAAGGAATGTAGCCTGAAG
ACACATTTATTACAAATAAAAGACGCGGTTTGTTGCTCAACAACAGAAGTGTAA