Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055386
CDS Infomation

pacid=37472366 polypeptide=PGSC0003DMP400037278 locus=PGSC0003DMG400021506 ID=PGSC0003DMT400055386.v4.03 annot-version=v4.03
Sequence

ATGGAGGATTACATTAAGGAGAATTATGGAGAAGTGAAACCGAAGAATTCATCGGAGGAA
GCACTTCAGAGATGGAGGAAGCTGTGTTGGCTGGTTAAAAATCCGAAACGTAGGTTCAGA
TTCACAGCGAACCTATCCAAACGCTTTGAAGCTCGGGCCATCCAGCGATCCAATCAGGAG
AAACTAAGAGTTGCTGTTCTGGTTTCACAAGCTGCACTTAGCTTTATTCAAGGAGTAAGC
TACACTGTCCCGGAGGAAGTGAAAGATGCCGGGTTTCAAATATGTGGTGATGAGTTGGGA
TCAATAGTCGAGGGCCACAATTTGAGGAAGCTGAAAGTTCATGGTGCGGTTGAGGGTATT
GCAAAAAAGCTATCAACATCAACCACCGATGGTATTTGTACTTCTGCTGATTTGCTTAGC
CGACGAAAAGAAATATATGGGATCAATAAGTTTATTGAGAGCCCATCAAGGGGCTTCTGG
ATTTTTGTATGGGAAGCTCTTCAAGATACAACCCTCATGATACTTGGTGTTTGTGCTTTT
GTATCGTTGGTTGTTGGCATAATGACTGAAGGATGGCCAAAGGGTGCACATGATGGACTT
GGTATTGTTGCAAGTATCCTGCTGGTTGTATTTGTTACTGCTACAAGCGACTATAGACAG
TCTTTACAGTTTAAGGATTTAGATAAAGAGAAGAAAAAGATTACAGTTCAGGTCACTAGA
AATGGCTACAGGCAAAAAATATCAATATATGATTTACTTCCTGGTGATATTGTTCATCTT
GCTATTGGGGATCAGGTACCAGCTGATGGACTCTTCCTCTCTGGTTTTTCTTTGTTGATA
GATGAATCAAGTTTAACAGGGGAGAGTGAACCCATTAATGTAACTGCTGAAAATCCTTTT
CTCCTCTCTGGAACCAAAGTTCGTGATGGCTCGTGTAAAATGGTTATCACTACTGTTGGG
ATGAGAACCCAGTGGGGTAAACTGATGGCTACTCTTAGTGAAGGAGGAGATGATGAGACC
CCATTGCAGGTTAAACTGAATGGAGTGGCAACTATTATTGGTAAAATAGGTCTGTTTTTT
GCTGTCATCACATTTGCTGTGTTGGTGCAAGGCTTATATATCCGCAAATTAGGGGAAGGG
TCCCAATGGAGCTGGTCTATGGATGATGCCCAAGAAATGCTGGAATACTTTGCCATTGCA
GTTACAATTGTTGTGGTTGCTGTTCCTGAGGGGCTTCCTTTGGCTGTGACATTGAGTCTG
GCATTTGCTATGAAGAAGATGATGAATGATAAGGCACTTGTGCGCCATTTGGCTGCTTGT
GAGACAATGGGTTCTGCAACTACCATCTGTAGTGACAAGACTGGGACATTAACGACTAAT
CATATGACAGTTGTAAAAGCATGCATTTGCGGTAAAATCATAGAAACTGAAAGCTCTAAG
GATGGTTCTAATATCTGCTCTGAAGTTTCTAATTCTGCATTGAAAATACTAATCCAGTCT
ATATTCAATAATACTGGGGGAGAAATAGTAAAGAATGAAGATGGAAAAATTGAAATTCTG
GGAACACCGACTGAAACTGCTCTTTTGGAGTTCGGTCTTTTGCTTGGAGGGAATTTCCAG
GAAGAGCGTCAATCATCTAGACTTGTAAAGGTGGAGCCATTCAATTCAACGAAGAAGAGA
ATGGGTGTAGTTATAGAACTTCCTGGAAAAGGTCTCCGTGCACACTGTAAAGGAGCATCT
GAAATAATTTTGGCTTCATGTGACAGTTTCCTAAACTCTAGCGGCGAGGTTGTTCCCCTA
GATGAAGCTTCAATTAACCATCTGAATGATACGATTGACCTATTTGCTAATGAAGCTCTT
CGAACTTTGTGCCTTGCCTACAAGGACATCAGTGATGAGTACCCTGCTGAAACTCCTATC
CCCTTTGAGGGATATACCTGCGTAGGAATTGTAGGCATTAAAGATCCCGTTCGTCCTGGT
GTTAAGGAGTCTGTCGCAATTTGTAGATCAGCTGGAATCACTGTGAGAATGGTCACTGGA
GACAACATAAATACTGCTAAGGCTATTGCTAGAGAATGTGGAATTCTGACTGATGATGGT
ATTGCGATCGAAGGTCCAGTATTTAGGATGAAGAGTGAGGCCGAGCTGCAAGAAATAATT
CCAAAGTTACAGGTGATGGCACGTTCTTCTCCAATGGATAAACATACGCTAGTGAAACAT
TTACGTACGACTTTTCAAGAAGTTGTTGCAGTGACTGGAGACGGCACTAATGATGCTCCT
GCCCTTCATGAAGCAGATATAGGTCTTGCTATGGGCATTGCTGGAACTGAGGTAGCTAAA
GAGAGCGCAGACGTTATAATTTTAGATGATAATTTCTCAACAATTGTGACTGTGGCCAAA
TGGGGACGCTCAGTCTATGTGAATATTCAAAAGTTTGTTCAATTTCAGCTGACCGTAAAT
GTGGTTGCCTTGATTGTCAACTTTTCTTCAGCCTGTTTGACAGGGAGTGCTCCACTTACT
GCTGTTCAGCTTCTATGGGTCAACATGATCATGGACACACTGGGAGCTCTTGCACTAGCT
ACTGAACCTCCTAATGATGACTTGATGAAGCGAACGCCTGTAGGAAGGAAGGGGAACTTC
ATTAGCAATGTTATGTGGAGGAACATTTTGGGACAATCTTTTTACCAATTTGTAGTCATA
TGGTATCTTCAAACTACTGGCAAAGCTCTCTTTCATCTTGATGGATCAGATGCTGACTTG
ATTTTGAACACAGTCATTTTCAACTCTTTTGTGTTCTGTCAGGTTTTCAATGAGATTAGC
TCTAGAGATATGGAAAAGATAAATGTCTTCAAAGGTATATTGGACAACTATGTTTTTGTT
ACCGTCCTCAGCTCTACAGCTCTTTTCCAAATCATTATTGTTGAATTCCTCGGTACCTTT
GCAAGCACTTCTCCCCTTACATTCCATCAGTGGTTTACAAGTGTTGCAATCGGATTCCTG
GGGATGCCGATTGCTGCTGCCATCAAGATGATCCCAGTAGGATCAAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400037278
PEP Infomation

pacid=37472366 transcript=PGSC0003DMT400055386 locus=PGSC0003DMG400021506 ID=PGSC0003DMT400055386.v4.03 annot-version=v4.03
Sequence

MEDYIKENYGEVKPKNSSEEALQRWRKLCWLVKNPKRRFRFTANLSKRFEARAIQRSNQE
KLRVAVLVSQAALSFIQGVSYTVPEEVKDAGFQICGDELGSIVEGHNLRKLKVHGAVEGI
AKKLSTSTTDGICTSADLLSRRKEIYGINKFIESPSRGFWIFVWEALQDTTLMILGVCAF
VSLVVGIMTEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITVQVTR
NGYRQKISIYDLLPGDIVHLAIGDQVPADGLFLSGFSLLIDESSLTGESEPINVTAENPF
LLSGTKVRDGSCKMVITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF
AVITFAVLVQGLYIRKLGEGSQWSWSMDDAQEMLEYFAIAVTIVVVAVPEGLPLAVTLSL
AFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICGKIIETESSK
DGSNICSEVSNSALKILIQSIFNNTGGEIVKNEDGKIEILGTPTETALLEFGLLLGGNFQ
EERQSSRLVKVEPFNSTKKRMGVVIELPGKGLRAHCKGASEIILASCDSFLNSSGEVVPL
DEASINHLNDTIDLFANEALRTLCLAYKDISDEYPAETPIPFEGYTCVGIVGIKDPVRPG
VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFRMKSEAELQEII
PKLQVMARSSPMDKHTLVKHLRTTFQEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAK
ESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALIVNFSSACLTGSAPLT
AVQLLWVNMIMDTLGALALATEPPNDDLMKRTPVGRKGNFISNVMWRNILGQSFYQFVVI
WYLQTTGKALFHLDGSDADLILNTVIFNSFVFCQVFNEISSRDMEKINVFKGILDNYVFV
TVLSSTALFQIIIVEFLGTFASTSPLTFHQWFTSVAIGFLGMPIAAAIKMIPVGSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400055386
Transcript Infomation

pacid=37472366 locus=PGSC0003DMG400021506 ID=PGSC0003DMT400055386.v4.03 annot-version=v4.03
Sequence

ATGGAGGATTACATTAAGGAGAATTATGGAGAAGTGAAACCGAAGAATTCATCGGAGGAA
GCACTTCAGAGATGGAGGAAGCTGTGTTGGCTGGTTAAAAATCCGAAACGTAGGTTCAGA
TTCACAGCGAACCTATCCAAACGCTTTGAAGCTCGGGCCATCCAGCGATCCAATCAGGAG
AAACTAAGAGTTGCTGTTCTGGTTTCACAAGCTGCACTTAGCTTTATTCAAGGAGTAAGC
TACACTGTCCCGGAGGAAGTGAAAGATGCCGGGTTTCAAATATGTGGTGATGAGTTGGGA
TCAATAGTCGAGGGCCACAATTTGAGGAAGCTGAAAGTTCATGGTGCGGTTGAGGGTATT
GCAAAAAAGCTATCAACATCAACCACCGATGGTATTTGTACTTCTGCTGATTTGCTTAGC
CGACGAAAAGAAATATATGGGATCAATAAGTTTATTGAGAGCCCATCAAGGGGCTTCTGG
ATTTTTGTATGGGAAGCTCTTCAAGATACAACCCTCATGATACTTGGTGTTTGTGCTTTT
GTATCGTTGGTTGTTGGCATAATGACTGAAGGATGGCCAAAGGGTGCACATGATGGACTT
GGTATTGTTGCAAGTATCCTGCTGGTTGTATTTGTTACTGCTACAAGCGACTATAGACAG
TCTTTACAGTTTAAGGATTTAGATAAAGAGAAGAAAAAGATTACAGTTCAGGTCACTAGA
AATGGCTACAGGCAAAAAATATCAATATATGATTTACTTCCTGGTGATATTGTTCATCTT
GCTATTGGGGATCAGGTACCAGCTGATGGACTCTTCCTCTCTGGTTTTTCTTTGTTGATA
GATGAATCAAGTTTAACAGGGGAGAGTGAACCCATTAATGTAACTGCTGAAAATCCTTTT
CTCCTCTCTGGAACCAAAGTTCGTGATGGCTCGTGTAAAATGGTTATCACTACTGTTGGG
ATGAGAACCCAGTGGGGTAAACTGATGGCTACTCTTAGTGAAGGAGGAGATGATGAGACC
CCATTGCAGGTTAAACTGAATGGAGTGGCAACTATTATTGGTAAAATAGGTCTGTTTTTT
GCTGTCATCACATTTGCTGTGTTGGTGCAAGGCTTATATATCCGCAAATTAGGGGAAGGG
TCCCAATGGAGCTGGTCTATGGATGATGCCCAAGAAATGCTGGAATACTTTGCCATTGCA
GTTACAATTGTTGTGGTTGCTGTTCCTGAGGGGCTTCCTTTGGCTGTGACATTGAGTCTG
GCATTTGCTATGAAGAAGATGATGAATGATAAGGCACTTGTGCGCCATTTGGCTGCTTGT
GAGACAATGGGTTCTGCAACTACCATCTGTAGTGACAAGACTGGGACATTAACGACTAAT
CATATGACAGTTGTAAAAGCATGCATTTGCGGTAAAATCATAGAAACTGAAAGCTCTAAG
GATGGTTCTAATATCTGCTCTGAAGTTTCTAATTCTGCATTGAAAATACTAATCCAGTCT
ATATTCAATAATACTGGGGGAGAAATAGTAAAGAATGAAGATGGAAAAATTGAAATTCTG
GGAACACCGACTGAAACTGCTCTTTTGGAGTTCGGTCTTTTGCTTGGAGGGAATTTCCAG
GAAGAGCGTCAATCATCTAGACTTGTAAAGGTGGAGCCATTCAATTCAACGAAGAAGAGA
ATGGGTGTAGTTATAGAACTTCCTGGAAAAGGTCTCCGTGCACACTGTAAAGGAGCATCT
GAAATAATTTTGGCTTCATGTGACAGTTTCCTAAACTCTAGCGGCGAGGTTGTTCCCCTA
GATGAAGCTTCAATTAACCATCTGAATGATACGATTGACCTATTTGCTAATGAAGCTCTT
CGAACTTTGTGCCTTGCCTACAAGGACATCAGTGATGAGTACCCTGCTGAAACTCCTATC
CCCTTTGAGGGATATACCTGCGTAGGAATTGTAGGCATTAAAGATCCCGTTCGTCCTGGT
GTTAAGGAGTCTGTCGCAATTTGTAGATCAGCTGGAATCACTGTGAGAATGGTCACTGGA
GACAACATAAATACTGCTAAGGCTATTGCTAGAGAATGTGGAATTCTGACTGATGATGGT
ATTGCGATCGAAGGTCCAGTATTTAGGATGAAGAGTGAGGCCGAGCTGCAAGAAATAATT
CCAAAGTTACAGGTGATGGCACGTTCTTCTCCAATGGATAAACATACGCTAGTGAAACAT
TTACGTACGACTTTTCAAGAAGTTGTTGCAGTGACTGGAGACGGCACTAATGATGCTCCT
GCCCTTCATGAAGCAGATATAGGTCTTGCTATGGGCATTGCTGGAACTGAGGTAGCTAAA
GAGAGCGCAGACGTTATAATTTTAGATGATAATTTCTCAACAATTGTGACTGTGGCCAAA
TGGGGACGCTCAGTCTATGTGAATATTCAAAAGTTTGTTCAATTTCAGCTGACCGTAAAT
GTGGTTGCCTTGATTGTCAACTTTTCTTCAGCCTGTTTGACAGGGAGTGCTCCACTTACT
GCTGTTCAGCTTCTATGGGTCAACATGATCATGGACACACTGGGAGCTCTTGCACTAGCT
ACTGAACCTCCTAATGATGACTTGATGAAGCGAACGCCTGTAGGAAGGAAGGGGAACTTC
ATTAGCAATGTTATGTGGAGGAACATTTTGGGACAATCTTTTTACCAATTTGTAGTCATA
TGGTATCTTCAAACTACTGGCAAAGCTCTCTTTCATCTTGATGGATCAGATGCTGACTTG
ATTTTGAACACAGTCATTTTCAACTCTTTTGTGTTCTGTCAGGTTTTCAATGAGATTAGC
TCTAGAGATATGGAAAAGATAAATGTCTTCAAAGGTATATTGGACAACTATGTTTTTGTT
ACCGTCCTCAGCTCTACAGCTCTTTTCCAAATCATTATTGTTGAATTCCTCGGTACCTTT
GCAAGCACTTCTCCCCTTACATTCCATCAGTGGTTTACAAGTGTTGCAATCGGATTCCTG
GGGATGCCGATTGCTGCTGCCATCAAGATGATCCCAGTAGGATCAAGCTGA