Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055378
CDS Infomation

pacid=37440739 polypeptide=PGSC0003DMP400037272 locus=PGSC0003DMG400021499 ID=PGSC0003DMT400055378.v4.03 annot-version=v4.03
Sequence

ATGAAGTACGTGTTGGTGACAGGAGGAGTTGTTAGTGGGCTCGGTAAAGGAGTCACTGCC
AGCAGTATTGGTCTTATTCTTAAGGCCTGCGGTCTTCGTGTTACCTCCATTAAGATTGAT
CCTTATTTGAACACTGATGCTGGCACAATGTCTCCTTTCGAGCATGGAGAAGTGTATGTC
TTGGATGATGGTGGAGAGGTGGACCTGGACCTTGGAAACTATGAGCGTTTTCTAGATATT
AAGTTGACCGGTGACAACAATATAACTACTGGGAAAATTTACCAGTCTGTTATTGATAAG
GAGAGAAGAGGGGATTATTTGGGAAAGACTGTTCAGGTTGTCCCTCACATTACAGATGCC
ATTCAAGAGTGGATAGAACGTGTGGCTGTCATACCAGTTGATGGCAAGGATGGCCCACCA
GATGTTTGTGTCATAGAACTGGGTGGCACAATAGGAGATATTGAATCAATGCCATTTATT
GAAGCATTAGGACAATTCTCATATCGTGTTGGTGCTGGTAATTTTTGCTTGATACATGTC
AGCCTTGTACCTGTTTTGAGTGTAGTTGGTGAGCAGAAAACAAAACCTACTCAGCACAGT
GTTAGAGGTTTGAGAAGCCTGGGATTGACTCCCAACATTTTAGCATGCCGGAGCACAACG
GAACTAGAAGAGAATGTCAAGGAGAAAATTTCCCGGTTTTGCCATGTCCCGCTAGATAAC
ATTATTACTCTTTATGATGTCTCAAACATTTGGCGCGTTCCTTTGCTTTTAAGAGATCAG
AAGGCGCATGAAGCAATTCTGAAAGTTCTGAACCTTAAAGGTGTTGCACAAGAACCTGCT
TTGGGAGAATGGACATCTCGGGCTGCCCTCTGTGACAAGCTACAAGAGCCTGTTAGAGTA
GCCATGGTAGGAAAGTACACCGGTCTTTCAGATGCATACCTCTCTGTACTGAAGGCTCTT
GTGCATGCCTCTGTAGCTTGCCACAGGAAACTTTGTATAGATTGGATTGCAGCCAGTGAC
CTTGAGGATGAAACTTCTACAGAGAATCCTGAGAATTATAGAAGTGCTTGGAAGTTGTTG
AAGGGGGCGAATGCTATCCTAGTTCCTGGAGGATTTGGTGACAGAGGTGTGGAGGGTAAA
ATCCTCGCTGCTAGATATGCCCGTGCAAACAGGATTCCGTTCCTTGGCATATGTCTAGGA
ATGCAAATTGCTGTTATTGAGTTTGCTCGATCCATTCTTGGATTGCTAGATGCAAACAGT
ACAGAATTTGATCACAACACTCAGAATCCTTGTGTCATTTTTATGCCAGAGGGTTCAAAA
ACTCATATGGGTGGTACGATGCGTCTTGGATCTAGGAGAACATATTTTAAAGTTGCGGAT
TGTAAATCTGCAAAATTATATGGCAACCAGAGCTTTATAGATGAGAGGCATCGACACAGA
TATGAGGTGAACCCCGACATGGTGCAGCAACTTGAAGATGCTGGTCTTTCTTTCACTGGC
AAAGATGAAAGTGGTCACCGCATGGAGATTGTTGAGCTGCCAAATCATCCTTACTTCATC
GGAGTTCAATTTCATCCAGAATTTAAATCAAGGCCAGGAACCCCTTCTGCCCTGTTCCTA
GGACTTATAGCCGCAGCAACTGGGCAACTTGAAACTTTGTTGAAGAAGGGTGTTCCCAAA
ACATGGAGTTTGAGCAATGGCACGTCAGGACTAAAATCACATCGATATGTAAATGGGACA
AAGATGGCTAATGGATCATTAGATGGCATTTATTGCAACGGGAATGGTATACATGTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037272
PEP Infomation

pacid=37440739 transcript=PGSC0003DMT400055378 locus=PGSC0003DMG400021499 ID=PGSC0003DMT400055378.v4.03 annot-version=v4.03
Sequence

MKYVLVTGGVVSGLGKGVTASSIGLILKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVYV
LDDGGEVDLDLGNYERFLDIKLTGDNNITTGKIYQSVIDKERRGDYLGKTVQVVPHITDA
IQEWIERVAVIPVDGKDGPPDVCVIELGGTIGDIESMPFIEALGQFSYRVGAGNFCLIHV
SLVPVLSVVGEQKTKPTQHSVRGLRSLGLTPNILACRSTTELEENVKEKISRFCHVPLDN
IITLYDVSNIWRVPLLLRDQKAHEAILKVLNLKGVAQEPALGEWTSRAALCDKLQEPVRV
AMVGKYTGLSDAYLSVLKALVHASVACHRKLCIDWIAASDLEDETSTENPENYRSAWKLL
KGANAILVPGGFGDRGVEGKILAARYARANRIPFLGICLGMQIAVIEFARSILGLLDANS
TEFDHNTQNPCVIFMPEGSKTHMGGTMRLGSRRTYFKVADCKSAKLYGNQSFIDERHRHR
YEVNPDMVQQLEDAGLSFTGKDESGHRMEIVELPNHPYFIGVQFHPEFKSRPGTPSALFL
GLIAAATGQLETLLKKGVPKTWSLSNGTSGLKSHRYVNGTKMANGSLDGIYCNGNGIHV*

Transcript Sequence

Transcript ID

PGSC0003DMT400055378
Transcript Infomation

pacid=37440739 locus=PGSC0003DMG400021499 ID=PGSC0003DMT400055378.v4.03 annot-version=v4.03
Sequence

ATGAAGTACGTGTTGGTGACAGGAGGAGTTGTTAGTGGGCTCGGTAAAGGAGTCACTGCC
AGCAGTATTGGTCTTATTCTTAAGGCCTGCGGTCTTCGTGTTACCTCCATTAAGATTGAT
CCTTATTTGAACACTGATGCTGGCACAATGTCTCCTTTCGAGCATGGAGAAGTGTATGTC
TTGGATGATGGTGGAGAGGTGGACCTGGACCTTGGAAACTATGAGCGTTTTCTAGATATT
AAGTTGACCGGTGACAACAATATAACTACTGGGAAAATTTACCAGTCTGTTATTGATAAG
GAGAGAAGAGGGGATTATTTGGGAAAGACTGTTCAGGTTGTCCCTCACATTACAGATGCC
ATTCAAGAGTGGATAGAACGTGTGGCTGTCATACCAGTTGATGGCAAGGATGGCCCACCA
GATGTTTGTGTCATAGAACTGGGTGGCACAATAGGAGATATTGAATCAATGCCATTTATT
GAAGCATTAGGACAATTCTCATATCGTGTTGGTGCTGGTAATTTTTGCTTGATACATGTC
AGCCTTGTACCTGTTTTGAGTGTAGTTGGTGAGCAGAAAACAAAACCTACTCAGCACAGT
GTTAGAGGTTTGAGAAGCCTGGGATTGACTCCCAACATTTTAGCATGCCGGAGCACAACG
GAACTAGAAGAGAATGTCAAGGAGAAAATTTCCCGGTTTTGCCATGTCCCGCTAGATAAC
ATTATTACTCTTTATGATGTCTCAAACATTTGGCGCGTTCCTTTGCTTTTAAGAGATCAG
AAGGCGCATGAAGCAATTCTGAAAGTTCTGAACCTTAAAGGTGTTGCACAAGAACCTGCT
TTGGGAGAATGGACATCTCGGGCTGCCCTCTGTGACAAGCTACAAGAGCCTGTTAGAGTA
GCCATGGTAGGAAAGTACACCGGTCTTTCAGATGCATACCTCTCTGTACTGAAGGCTCTT
GTGCATGCCTCTGTAGCTTGCCACAGGAAACTTTGTATAGATTGGATTGCAGCCAGTGAC
CTTGAGGATGAAACTTCTACAGAGAATCCTGAGAATTATAGAAGTGCTTGGAAGTTGTTG
AAGGGGGCGAATGCTATCCTAGTTCCTGGAGGATTTGGTGACAGAGGTGTGGAGGGTAAA
ATCCTCGCTGCTAGATATGCCCGTGCAAACAGGATTCCGTTCCTTGGCATATGTCTAGGA
ATGCAAATTGCTGTTATTGAGTTTGCTCGATCCATTCTTGGATTGCTAGATGCAAACAGT
ACAGAATTTGATCACAACACTCAGAATCCTTGTGTCATTTTTATGCCAGAGGGTTCAAAA
ACTCATATGGGTGGTACGATGCGTCTTGGATCTAGGAGAACATATTTTAAAGTTGCGGAT
TGTAAATCTGCAAAATTATATGGCAACCAGAGCTTTATAGATGAGAGGCATCGACACAGA
TATGAGGTGAACCCCGACATGGTGCAGCAACTTGAAGATGCTGGTCTTTCTTTCACTGGC
AAAGATGAAAGTGGTCACCGCATGGAGATTGTTGAGCTGCCAAATCATCCTTACTTCATC
GGAGTTCAATTTCATCCAGAATTTAAATCAAGGCCAGGAACCCCTTCTGCCCTGTTCCTA
GGACTTATAGCCGCAGCAACTGGGCAACTTGAAACTTTGTTGAAGAAGGGTGTTCCCAAA
ACATGGAGTTTGAGCAATGGCACGTCAGGACTAAAATCACATCGATATGTAAATGGGACA
AAGATGGCTAATGGATCATTAGATGGCATTTATTGCAACGGGAATGGTATACATGTCTAA