Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055322
CDS Infomation

pacid=37427784 polypeptide=PGSC0003DMP400037231 locus=PGSC0003DMG400021474 ID=PGSC0003DMT400055322.v4.03 annot-version=v4.03
Sequence

ATGGCACCAGTTTCATTGCCTCCGGGATTCAGGTTTCATCCAACAGATGAAGAACTTGTT
GCTTATTATTTGAAAAGAAAGATCAATGGAAGGAAAATTGAACTCGAAGTCATTCCTGAA
GTTGATCTTTACAAATGTGAGCCATGGGATTTACCAGATAAGTCCCTATTGCCTAGTAAA
GATATGGAATGGTACTTCTTCAGTCCTCGTGATCGTAAATACCCTAATGGAACAAGGACT
AATCGTGCAACGAAAGCTGGGTACTGGAAGGCAACCGGTAAGGACCGGAAAGTAAATTCA
CAGATGAGGCCAATTGGAATGAAGAAAACTCTTGTATATTACAGAGGAAGAGCACCTCAT
GGAACTCGAACCGGTTGGGTTATGCATGAATATCGTTTGGAAGAAAGAGAATGTGAAGTT
GCTAACGGCCTCCAGGATGCTTATGCACTTTGTCGTGTATTCAAGAAGAGTTTGAATGTT
CCAAAAATTGGAGATCATTATGGTAGTGATCGATCAGGTTGTAGCATTAATGATCAATTG
TATACTGAAGGAAGAGGTGAAGATTCTGATTATGGAATGATGCCTACAACAACTTCATCA
TCATCCATGCTTCTTCATGGTTCACCATTAATGAATGTTGCACCTGCTCCAAGCAATGAT
GATAATAAATGGATGCAATACTTGTCAGATGAAGCTAATTTCACTTTCAATAACAATCCA
TCATTTCCCACTAATGGACCTTTTCCATATAATCATCCATCTAAGGTTGATATAGCATTA
GAGTGTGCAAGGTTGCAGCATAGATTTGCGTTGCCTCCATTGGAAGTGCAAGATTTTCCC
CAAGTAGGATATGTGATGTCTCAATCAAATGATGTTATGTATCATCAGAGCACAACAAAT
CAAACTGACATTGTACAAGAAATACTCTCAGTAGCCCAAGCTTCACATGACCTTACAAAT
CAAGAATATTCATGGGATGGAAATTATAATAATATTAATTATGGAGATGACTTCTCTTTT
CTTCCTCATAATAACAATCATGACTTGGGTAATTCCTTCAATTTTATGGACCAATTAAAG
GAAGATGATGATCAAAATAATTCCATACCAATTGTTGATTTTGATGAGGATTTCAAATCT
GAGACTATGGTTGAAAGATTAAGATGGGTAGGTATGTCACAAAAGGATGACAAGACCTTT
CTTGAGGACTACAAGACTGTCCCAATAGAAAATATTTCAGGTCCCCATAAAGAGGAACAA
GATCAACTCCAAGGAGAAGCAAGTGGTCAGCAAAACAACATGAATGAAACAGAAGCAAAC
AATTTCTCATTAGGATTTGGTAATGATGACAACTTCTTGGATGATGAAGAGACTGATGGT
TTTTCAAGTTCACCAAGCTTTGAAGTTTATGAGAAAATAGAAGTGAACCAAGGAATGTTT
ATTGCCACAAGACAAGTAGCCAATACATTCTATCATCAAGTGGCACCTTCAAAAACAGTG
ACAATCCATAGAGACATGGTCACAATGCATGAGTTTCCTATAAGGAAAATAACAAAAAAT
GCTACATTTCTTGATACATTTATGGCATTTTCAAGGAAAACTCTATCAGGAGTAGTTATG
AGAGTCAACACTTTGGTAGAATTGATTGCACCTTTACATGCATTTTGGACTATTTTGGGG
AATGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037231
PEP Infomation

pacid=37427784 transcript=PGSC0003DMT400055322 locus=PGSC0003DMG400021474 ID=PGSC0003DMT400055322.v4.03 annot-version=v4.03
Sequence

MAPVSLPPGFRFHPTDEELVAYYLKRKINGRKIELEVIPEVDLYKCEPWDLPDKSLLPSK
DMEWYFFSPRDRKYPNGTRTNRATKAGYWKATGKDRKVNSQMRPIGMKKTLVYYRGRAPH
GTRTGWVMHEYRLEERECEVANGLQDAYALCRVFKKSLNVPKIGDHYGSDRSGCSINDQL
YTEGRGEDSDYGMMPTTTSSSSMLLHGSPLMNVAPAPSNDDNKWMQYLSDEANFTFNNNP
SFPTNGPFPYNHPSKVDIALECARLQHRFALPPLEVQDFPQVGYVMSQSNDVMYHQSTTN
QTDIVQEILSVAQASHDLTNQEYSWDGNYNNINYGDDFSFLPHNNNHDLGNSFNFMDQLK
EDDDQNNSIPIVDFDEDFKSETMVERLRWVGMSQKDDKTFLEDYKTVPIENISGPHKEEQ
DQLQGEASGQQNNMNETEANNFSLGFGNDDNFLDDEETDGFSSSPSFEVYEKIEVNQGMF
IATRQVANTFYHQVAPSKTVTIHRDMVTMHEFPIRKITKNATFLDTFMAFSRKTLSGVVM
RVNTLVELIAPLHAFWTILGNA*

Transcript Sequence

Transcript ID

PGSC0003DMT400055322
Transcript Infomation

pacid=37427784 locus=PGSC0003DMG400021474 ID=PGSC0003DMT400055322.v4.03 annot-version=v4.03
Sequence

ATGGCACCAGTTTCATTGCCTCCGGGATTCAGGTTTCATCCAACAGATGAAGAACTTGTT
GCTTATTATTTGAAAAGAAAGATCAATGGAAGGAAAATTGAACTCGAAGTCATTCCTGAA
GTTGATCTTTACAAATGTGAGCCATGGGATTTACCAGATAAGTCCCTATTGCCTAGTAAA
GATATGGAATGGTACTTCTTCAGTCCTCGTGATCGTAAATACCCTAATGGAACAAGGACT
AATCGTGCAACGAAAGCTGGGTACTGGAAGGCAACCGGTAAGGACCGGAAAGTAAATTCA
CAGATGAGGCCAATTGGAATGAAGAAAACTCTTGTATATTACAGAGGAAGAGCACCTCAT
GGAACTCGAACCGGTTGGGTTATGCATGAATATCGTTTGGAAGAAAGAGAATGTGAAGTT
GCTAACGGCCTCCAGGATGCTTATGCACTTTGTCGTGTATTCAAGAAGAGTTTGAATGTT
CCAAAAATTGGAGATCATTATGGTAGTGATCGATCAGGTTGTAGCATTAATGATCAATTG
TATACTGAAGGAAGAGGTGAAGATTCTGATTATGGAATGATGCCTACAACAACTTCATCA
TCATCCATGCTTCTTCATGGTTCACCATTAATGAATGTTGCACCTGCTCCAAGCAATGAT
GATAATAAATGGATGCAATACTTGTCAGATGAAGCTAATTTCACTTTCAATAACAATCCA
TCATTTCCCACTAATGGACCTTTTCCATATAATCATCCATCTAAGGTTGATATAGCATTA
GAGTGTGCAAGGTTGCAGCATAGATTTGCGTTGCCTCCATTGGAAGTGCAAGATTTTCCC
CAAGTAGGATATGTGATGTCTCAATCAAATGATGTTATGTATCATCAGAGCACAACAAAT
CAAACTGACATTGTACAAGAAATACTCTCAGTAGCCCAAGCTTCACATGACCTTACAAAT
CAAGAATATTCATGGGATGGAAATTATAATAATATTAATTATGGAGATGACTTCTCTTTT
CTTCCTCATAATAACAATCATGACTTGGGTAATTCCTTCAATTTTATGGACCAATTAAAG
GAAGATGATGATCAAAATAATTCCATACCAATTGTTGATTTTGATGAGGATTTCAAATCT
GAGACTATGGTTGAAAGATTAAGATGGGTAGGTATGTCACAAAAGGATGACAAGACCTTT
CTTGAGGACTACAAGACTGTCCCAATAGAAAATATTTCAGGTCCCCATAAAGAGGAACAA
GATCAACTCCAAGGAGAAGCAAGTGGTCAGCAAAACAACATGAATGAAACAGAAGCAAAC
AATTTCTCATTAGGATTTGGTAATGATGACAACTTCTTGGATGATGAAGAGACTGATGGT
TTTTCAAGTTCACCAAGCTTTGAAGTTTATGAGAAAATAGAAGTGAACCAAGGAATGTTT
ATTGCCACAAGACAAGTAGCCAATACATTCTATCATCAAGTGGCACCTTCAAAAACAGTG
ACAATCCATAGAGACATGGTCACAATGCATGAGTTTCCTATAAGGAAAATAACAAAAAAT
GCTACATTTCTTGATACATTTATGGCATTTTCAAGGAAAACTCTATCAGGAGTAGTTATG
AGAGTCAACACTTTGGTAGAATTGATTGCACCTTTACATGCATTTTGGACTATTTTGGGG
AATGCTTAA