Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055319
CDS Infomation

pacid=37428913 polypeptide=PGSC0003DMP400037229 locus=PGSC0003DMG400021472 ID=PGSC0003DMT400055319.v4.03 annot-version=v4.03
Sequence

ATGGGGAGTTGTTTGAGTAAGAAGAGCACTTGTTCTTCTTCTCCTCCTCTTGCACTTGTG
AAACAAAATCAAGAAACCTTGGTAGAAAAGAAGAAAGTAGATGGACAGATAGTGAGAAGA
GAAATCTTTGTTATCAAACACAGGATAAGTCATGAAGAAGGATCTACTGAATCTTGTGCA
CCATCGAGGAGGACTTCAAGTTGTACCAAAGATGAAGTTGATACTATTTTGATACAATGT
GGGAGGCTTAGCAGAAGCTCATCTCCCAACAGAGGTCTTCCTGGTGAAGCTTCTCATAAT
ACTAATAATAGAAGTAGAAAGTACTCTATTTCCAAGAAAAGTTGGGATTTTGACTATGAA
AACAGAAGTGATGGGAGCAGAAGGGTGAGTAGATCTCCTGTTAGAAGATCTGAATCACCA
ATTAAAGCTCCCAGTTGTGCTAATTTGGCTTCTATTGATGCTAATGGGATTAGTGTTAGA
CCAGGAAAGATGGTGTCTGTGCCTGCTACAGTTTCATCTCTTATGATGGATAAGAATGCT
GACCTGATTTCTACAGCTACTATTCAAAGGATTCAAGTGAAGAGAAATGTGGGTTCTGCA
TCTCCTCGTGCTCGGTCCCGGTCAGGCTCCCCGGCAAAGGTGAATTTGAAGGCGTCAACT
GAGAACATGAATTTCCAACAGCAGAGCCGCAGCAATTCCAGGAAAAAAGAAGATTCTCCT
TTCAGAAGAAATCCTTCAAGTGAGACTGATACCCCTGTGCCCTTCTATATCCAGAAACTG
AATGCAGAAAATGGCAAAGTTGTTTTGCAAGGAACTGAGGAAAACCTCGGCATCAGCAAA
GCAGCTCCAGATTATGGCCTTACAAATGTTTATGCCAAATTCAAGAAGCAGCAGCTGGCA
CAGGAAGCTAAAGCATTGAGAACAGTTTCAGGGAATGCTGCAGTGGATATGGTTGCTTCA
GGATTCGAAACCTCAGTGCCCGAGGTAATAAGAAGAAGCAGGTCACCGAGCATTAATCAT
AGGGTTCAGTCAAATCCTACTCAATCATATACTGAGTTATTGCTTGAGGACATCCAAAAC
TTTCATCAAAAGAGCAGAAACCCTTCATTTTCACTTCCATCTGGTGCAGTTCCCGACTTC
AACTCAACTACTAGTTCCAATCTATCCAGTGCTTTCTCTGAAGACAGAAGAAGCAACCGC
ACAGTCGAGCATTTTAACAAGAATACCAGTGCTTGTTTAGCAACCAATCCTCAGAGTAAA
AACAGGTTAGGAATAAAGAACCCATATGCAGGGTCTGAGGTTGCCTTTAGTGATGACTCA
ATGGAGCCTTCCAGAATACAGAAGTATGCAACCTTTGGAAGGGGAACTGATGGAGGCTCT
ATGGAAGAACTCGAATCCTCAGAAAGCAATAGTTTTGTTGGTTATCAACAATGTAGGTTT
TCCTCGTCCTCACAAGAACCAAATTCAGCTGATTCAACCGATTCTTGGACTCCAAAATCT
TACAGTAGGCTGTATATGAATCCATTAGCCTTTCAAAAGTGTACAGTATCTGATCATGTT
CCTGATATGGATGAAGGTAAAAGTAGAATGACTGCAAATAAGAGGGATTCTGACAACCAG
CAACATGGAATAGTTCACAACAGCAGTGAACCTAGAGGACTTCACATAACACCTGTGGCG
GCAGCAGCTGCTTTAACTTATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400037229
PEP Infomation

pacid=37428913 transcript=PGSC0003DMT400055319 locus=PGSC0003DMG400021472 ID=PGSC0003DMT400055319.v4.03 annot-version=v4.03
Sequence

MGSCLSKKSTCSSSPPLALVKQNQETLVEKKKVDGQIVRREIFVIKHRISHEEGSTESCA
PSRRTSSCTKDEVDTILIQCGRLSRSSSPNRGLPGEASHNTNNRSRKYSISKKSWDFDYE
NRSDGSRRVSRSPVRRSESPIKAPSCANLASIDANGISVRPGKMVSVPATVSSLMMDKNA
DLISTATIQRIQVKRNVGSASPRARSRSGSPAKVNLKASTENMNFQQQSRSNSRKKEDSP
FRRNPSSETDTPVPFYIQKLNAENGKVVLQGTEENLGISKAAPDYGLTNVYAKFKKQQLA
QEAKALRTVSGNAAVDMVASGFETSVPEVIRRSRSPSINHRVQSNPTQSYTELLLEDIQN
FHQKSRNPSFSLPSGAVPDFNSTTSSNLSSAFSEDRRSNRTVEHFNKNTSACLATNPQSK
NRLGIKNPYAGSEVAFSDDSMEPSRIQKYATFGRGTDGGSMEELESSESNSFVGYQQCRF
SSSSQEPNSADSTDSWTPKSYSRLYMNPLAFQKCTVSDHVPDMDEGKSRMTANKRDSDNQ
QHGIVHNSSEPRGLHITPVAAAAALTY*

Transcript Sequence

Transcript ID

PGSC0003DMT400055319
Transcript Infomation

pacid=37428913 locus=PGSC0003DMG400021472 ID=PGSC0003DMT400055319.v4.03 annot-version=v4.03
Sequence

ATGGGGAGTTGTTTGAGTAAGAAGAGCACTTGTTCTTCTTCTCCTCCTCTTGCACTTGTG
AAACAAAATCAAGAAACCTTGGTAGAAAAGAAGAAAGTAGATGGACAGATAGTGAGAAGA
GAAATCTTTGTTATCAAACACAGGATAAGTCATGAAGAAGGATCTACTGAATCTTGTGCA
CCATCGAGGAGGACTTCAAGTTGTACCAAAGATGAAGTTGATACTATTTTGATACAATGT
GGGAGGCTTAGCAGAAGCTCATCTCCCAACAGAGGTCTTCCTGGTGAAGCTTCTCATAAT
ACTAATAATAGAAGTAGAAAGTACTCTATTTCCAAGAAAAGTTGGGATTTTGACTATGAA
AACAGAAGTGATGGGAGCAGAAGGGTGAGTAGATCTCCTGTTAGAAGATCTGAATCACCA
ATTAAAGCTCCCAGTTGTGCTAATTTGGCTTCTATTGATGCTAATGGGATTAGTGTTAGA
CCAGGAAAGATGGTGTCTGTGCCTGCTACAGTTTCATCTCTTATGATGGATAAGAATGCT
GACCTGATTTCTACAGCTACTATTCAAAGGATTCAAGTGAAGAGAAATGTGGGTTCTGCA
TCTCCTCGTGCTCGGTCCCGGTCAGGCTCCCCGGCAAAGGTGAATTTGAAGGCGTCAACT
GAGAACATGAATTTCCAACAGCAGAGCCGCAGCAATTCCAGGAAAAAAGAAGATTCTCCT
TTCAGAAGAAATCCTTCAAGTGAGACTGATACCCCTGTGCCCTTCTATATCCAGAAACTG
AATGCAGAAAATGGCAAAGTTGTTTTGCAAGGAACTGAGGAAAACCTCGGCATCAGCAAA
GCAGCTCCAGATTATGGCCTTACAAATGTTTATGCCAAATTCAAGAAGCAGCAGCTGGCA
CAGGAAGCTAAAGCATTGAGAACAGTTTCAGGGAATGCTGCAGTGGATATGGTTGCTTCA
GGATTCGAAACCTCAGTGCCCGAGGTAATAAGAAGAAGCAGGTCACCGAGCATTAATCAT
AGGGTTCAGTCAAATCCTACTCAATCATATACTGAGTTATTGCTTGAGGACATCCAAAAC
TTTCATCAAAAGAGCAGAAACCCTTCATTTTCACTTCCATCTGGTGCAGTTCCCGACTTC
AACTCAACTACTAGTTCCAATCTATCCAGTGCTTTCTCTGAAGACAGAAGAAGCAACCGC
ACAGTCGAGCATTTTAACAAGAATACCAGTGCTTGTTTAGCAACCAATCCTCAGAGTAAA
AACAGGTTAGGAATAAAGAACCCATATGCAGGGTCTGAGGTTGCCTTTAGTGATGACTCA
ATGGAGCCTTCCAGAATACAGAAGTATGCAACCTTTGGAAGGGGAACTGATGGAGGCTCT
ATGGAAGAACTCGAATCCTCAGAAAGCAATAGTTTTGTTGGTTATCAACAATGTAGGTTT
TCCTCGTCCTCACAAGAACCAAATTCAGCTGATTCAACCGATTCTTGGACTCCAAAATCT
TACAGTAGGCTGTATATGAATCCATTAGCCTTTCAAAAGTGTACAGTATCTGATCATGTT
CCTGATATGGATGAAGGTAAAAGTAGAATGACTGCAAATAAGAGGGATTCTGACAACCAG
CAACATGGAATAGTTCACAACAGCAGTGAACCTAGAGGACTTCACATAACACCTGTGGCG
GCAGCAGCTGCTTTAACTTATTAG