Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055255
CDS Infomation

pacid=37426922 polypeptide=PGSC0003DMP400037180 locus=PGSC0003DMG400021452 ID=PGSC0003DMT400055255.v4.03 annot-version=v4.03
Sequence

ATGGATGAGCTAAAGCCAACGCCACCAAATTCAAGTCCTCTTACTCCTATTACCTTCTTG
GAAAGAGCTGCTACTATCTATGCCGATTGCCCTTCCATCGTCTACAACAACACAACTCAC
AATTGGTCCCAAACCCATTCTCGTTGCCTAAAAGTTGCTTCATCCATTGCATCTTTTGGT
ATTCAAAGAAATCATGTTGTCTCCGTTGTTGCCCCTAATATCCCTGCCATGTATGAGCTT
CATTTTGCTGTTCCCATGGCTGGTGCTGTACTCAACACCATTAATCTCCGTCTTGATGCA
CGTACTATCTCTGTACTCCTCCGTCACAGCGAATCTAAACTCCTCTTCGTTGATTGTCAA
TCCAAATCCCTAATTCTCGAAGCTCTGTCCTTATTTCCGCCTGAATTCCACCGTCCGGTT
CTCGTTCTTATCGAGGACGACGAATTCCCAATTCCAAAAACTGATGAATTTATCGCTACT
TATGAGGAATTGGTTGAAAGAGGGGATTCGGGTTTCAATTGGATTCGCCCGAAAAGTGAA
TTTGATCCGATTGCTATGAATTACACTTCTGGAACTACATCTGCTCCGAAAGGTGTGGTT
CATAGCCATAGGGGTATTTTCGTTGTTTCGTTGGATTCGTTGATTGAATGGTCCGTTCCG
AAACAGCCGGTTTATTTATGGACGCTACCTATGTTTCATGCAAACGGATGGAGTTATCCA
TGGGGAATGGCTGCTGTTGGTGGAACGAATATCTGTTTGAGAAAATTCGATGCCGGAATC
ATTTATGACTCGATCAACAAACATGGTGTTACTCATATCTGCGCTGCTCCAGTGGTACTC
AACATGTTGTCGAATTCCCCTGACAGTAAGCCATTAAAACACCCTGTTTATATAATGACA
GCAGGATCCCCACCCCCTGCTGCTGTCCTGTTTCGAACAGAGTCCCTTGGATTTGTAGTC
CATCATGGTTATGGACTTACAGAAACTGGTGGATTAGTTATTTCTTGTACATGGAAAAAT
CACTGGAATAAATTTCCAGCAAATGAAAGAGCAAGGCTGAAATCAAGACAAGGGGTTAGG
ACATTAGGGATGGCGGAAGTGGACGTGGTGGATCCAGAATCAGGAGTCAGTGTTAAACGG
GACGGATCAACATTAGGAGAAATTGTTCTAAAGGGTGCCTGTGTCATGTTGGGTTACTTT
AAAGACCCGGAAGGAACGTCGAAATGCATGAAAGATGATGGTTGGTTTTACACAGGGGAT
GTGGCAGTTATGCATCCTGATGGATACTTAGAAATTAAAGACAGATCAAAGGACGTGATC
ATAAGTGGTGGAGAGAATTTGAGCAGTGTAGAAGTGGAATCAGTGTTGTATACCCATCCA
GCGATTAACGAAGCAGCAGTAGTGGCACGGCCAGATGAATTCTGGGGCGAAACACCGTGT
GCATTTGTTAGTCTGAATGGAAAACACAAGGCGAGTGAAAAAGACATTATTGAGTTTTGT
AGAGCCAAATTGCCACATTATATGGTACCAAAGACTGTCATAATTAAACAAGAGCTTCCA
AAGACATCAACAGGGAAAATTCAGAAGTTCGTGCTTAGAGACATTGCTAAAAGTATGGGG
AAAAGCAATAGCAGCAAGAAGGTGAGCAGAATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400037180
PEP Infomation

pacid=37426922 transcript=PGSC0003DMT400055255 locus=PGSC0003DMG400021452 ID=PGSC0003DMT400055255.v4.03 annot-version=v4.03
Sequence

MDELKPTPPNSSPLTPITFLERAATIYADCPSIVYNNTTHNWSQTHSRCLKVASSIASFG
IQRNHVVSVVAPNIPAMYELHFAVPMAGAVLNTINLRLDARTISVLLRHSESKLLFVDCQ
SKSLILEALSLFPPEFHRPVLVLIEDDEFPIPKTDEFIATYEELVERGDSGFNWIRPKSE
FDPIAMNYTSGTTSAPKGVVHSHRGIFVVSLDSLIEWSVPKQPVYLWTLPMFHANGWSYP
WGMAAVGGTNICLRKFDAGIIYDSINKHGVTHICAAPVVLNMLSNSPDSKPLKHPVYIMT
AGSPPPAAVLFRTESLGFVVHHGYGLTETGGLVISCTWKNHWNKFPANERARLKSRQGVR
TLGMAEVDVVDPESGVSVKRDGSTLGEIVLKGACVMLGYFKDPEGTSKCMKDDGWFYTGD
VAVMHPDGYLEIKDRSKDVIISGGENLSSVEVESVLYTHPAINEAAVVARPDEFWGETPC
AFVSLNGKHKASEKDIIEFCRAKLPHYMVPKTVIIKQELPKTSTGKIQKFVLRDIAKSMG
KSNSSKKVSRM*

Transcript Sequence

Transcript ID

PGSC0003DMT400055255
Transcript Infomation

pacid=37426922 locus=PGSC0003DMG400021452 ID=PGSC0003DMT400055255.v4.03 annot-version=v4.03
Sequence

ATGGATGAGCTAAAGCCAACGCCACCAAATTCAAGTCCTCTTACTCCTATTACCTTCTTG
GAAAGAGCTGCTACTATCTATGCCGATTGCCCTTCCATCGTCTACAACAACACAACTCAC
AATTGGTCCCAAACCCATTCTCGTTGCCTAAAAGTTGCTTCATCCATTGCATCTTTTGGT
ATTCAAAGAAATCATGTTGTCTCCGTTGTTGCCCCTAATATCCCTGCCATGTATGAGCTT
CATTTTGCTGTTCCCATGGCTGGTGCTGTACTCAACACCATTAATCTCCGTCTTGATGCA
CGTACTATCTCTGTACTCCTCCGTCACAGCGAATCTAAACTCCTCTTCGTTGATTGTCAA
TCCAAATCCCTAATTCTCGAAGCTCTGTCCTTATTTCCGCCTGAATTCCACCGTCCGGTT
CTCGTTCTTATCGAGGACGACGAATTCCCAATTCCAAAAACTGATGAATTTATCGCTACT
TATGAGGAATTGGTTGAAAGAGGGGATTCGGGTTTCAATTGGATTCGCCCGAAAAGTGAA
TTTGATCCGATTGCTATGAATTACACTTCTGGAACTACATCTGCTCCGAAAGGTGTGGTT
CATAGCCATAGGGGTATTTTCGTTGTTTCGTTGGATTCGTTGATTGAATGGTCCGTTCCG
AAACAGCCGGTTTATTTATGGACGCTACCTATGTTTCATGCAAACGGATGGAGTTATCCA
TGGGGAATGGCTGCTGTTGGTGGAACGAATATCTGTTTGAGAAAATTCGATGCCGGAATC
ATTTATGACTCGATCAACAAACATGGTGTTACTCATATCTGCGCTGCTCCAGTGGTACTC
AACATGTTGTCGAATTCCCCTGACAGTAAGCCATTAAAACACCCTGTTTATATAATGACA
GCAGGATCCCCACCCCCTGCTGCTGTCCTGTTTCGAACAGAGTCCCTTGGATTTGTAGTC
CATCATGGTTATGGACTTACAGAAACTGGTGGATTAGTTATTTCTTGTACATGGAAAAAT
CACTGGAATAAATTTCCAGCAAATGAAAGAGCAAGGCTGAAATCAAGACAAGGGGTTAGG
ACATTAGGGATGGCGGAAGTGGACGTGGTGGATCCAGAATCAGGAGTCAGTGTTAAACGG
GACGGATCAACATTAGGAGAAATTGTTCTAAAGGGTGCCTGTGTCATGTTGGGTTACTTT
AAAGACCCGGAAGGAACGTCGAAATGCATGAAAGATGATGGTTGGTTTTACACAGGGGAT
GTGGCAGTTATGCATCCTGATGGATACTTAGAAATTAAAGACAGATCAAAGGACGTGATC
ATAAGTGGTGGAGAGAATTTGAGCAGTGTAGAAGTGGAATCAGTGTTGTATACCCATCCA
GCGATTAACGAAGCAGCAGTAGTGGCACGGCCAGATGAATTCTGGGGCGAAACACCGTGT
GCATTTGTTAGTCTGAATGGAAAACACAAGGCGAGTGAAAAAGACATTATTGAGTTTTGT
AGAGCCAAATTGCCACATTATATGGTACCAAAGACTGTCATAATTAAACAAGAGCTTCCA
AAGACATCAACAGGGAAAATTCAGAAGTTCGTGCTTAGAGACATTGCTAAAAGTATGGGG
AAAAGCAATAGCAGCAAGAAGGTGAGCAGAATGTAG