Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055245
CDS Infomation

pacid=37428504 polypeptide=PGSC0003DMP400037173 locus=PGSC0003DMG400021447 ID=PGSC0003DMT400055245.v4.03 annot-version=v4.03
Sequence

ATGGAAGCCATCAGAAATTGGGCAGATTTAGGGATTGTTGATACTATTTATGAAGACGAT
GCTGAAGATTCCTCTACTTCTTCTCTTTCGATCTCTCCAGGAATCTCCCCATCTCCCCGC
TCTAAGGTCGTCTCCTGGTCACAAGTTACTGGAAATGAGACTGATGTAGTCATACATGTT
GAGAGCTCACGTTTTCGCTTACACAAGGATCCGTTGGCAGCAAGGAGTGGATTTCTGAAA
AGAAAGCTGAAGGGTCTGTCCGAATTAACCCTCTCTCCGCCGTTAAAGATAACGGCCGAA
ACATTCTCTTTGATCGCAGAGTTTTGTTATGACTCGCACATCGTCGTTACGCCGTTTAAC
GTCGCCGCACTTCGTACGGCGGCGGAATTGCTAGAGATGACGGAGGCTAATAACATTGCC
GGTGGCGAAAACTTGGCTCAGAAAACGGAAGCATATTTCCGCCGTGTAATTGCCGTTAAT
CGTGAATATGCATCGATCGTGCTGCGTTCTTGTGTTTCTCTGCTCCCGGAGTGTGAAACG
ACATCGCCACTGTTGAGTAGATGTATTGAAGCGTTAAGTTTGGTAGACAACGGTGACAGC
ATTATGAAGTGCCTCAGCGAAGTTAAAGAGTTGCGGCCTGTGGAATTTCAGTTAATCGTG
ATGTCCATGAATCGGTGGTTGAGTGGAAGCCATGATCAACTCTATAGAGTTGTTGACCTT
TATCTTAAGGAATACAAGGGGAAGATAACAGATGAAGAAAAAATCATAATGTGCAATTAC
ATCGACTGTAGCATCCTTTCGCCACAACTTCTCATGCATGCGGTCCAAAACGCCAGAATG
CCATTAAGGTTTGTGGTCCAAGCCATGTTCATTGAGCAATTGAGCACCCGCCGCTCTATC
CTAACGTCCACTGCTGCTGACAACCACGATCATCACATTGATCTTCTCCGAAGCAAAAAT
GATGTCAGTTTGGGTGCAATTCTCGAGCGAGACGCAGCACTTCGTCAAGTGTCACAGCTT
AAGGCAGCTATGAACGCCACAAGCTCGCGAATCCAGAGTTTAGAGCAAGAGTTGAGTGGC
ATGAAGAAACTTCTTAACGAATCAGATCAAAACGCGAAGAATAACTCTGCTCGCTCTGCT
AGTTTTCGATTGAGTTCCGAGAATAAGATCGATAGAGGACAAATTGGATCAGTTTCATCA
GCAAGCTTCCGGATACTTACCGCTAGAGATAGAGCGGTTATGGGATCGTCTAATTCATCA
GAAGTATCTTACGAGAAAGTGGAAAAGATAAATTTTAGTAGAAGGTTTATGAATGGATTG
AAGAGCGCATTCCGAGTATCAAAGAAGAAAACAGAGACAAAGGTGGAAAACGTAAAAGAG
ACCGAAGATGGTAAACAACAACATGGGGAAGTTGTGGTGATAAAGAAGGATGTGCCTTTT
CGCAGGCAGCCTCGTTCTCTAGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037173
PEP Infomation

pacid=37428504 transcript=PGSC0003DMT400055245 locus=PGSC0003DMG400021447 ID=PGSC0003DMT400055245.v4.03 annot-version=v4.03
Sequence

MEAIRNWADLGIVDTIYEDDAEDSSTSSLSISPGISPSPRSKVVSWSQVTGNETDVVIHV
ESSRFRLHKDPLAARSGFLKRKLKGLSELTLSPPLKITAETFSLIAEFCYDSHIVVTPFN
VAALRTAAELLEMTEANNIAGGENLAQKTEAYFRRVIAVNREYASIVLRSCVSLLPECET
TSPLLSRCIEALSLVDNGDSIMKCLSEVKELRPVEFQLIVMSMNRWLSGSHDQLYRVVDL
YLKEYKGKITDEEKIIMCNYIDCSILSPQLLMHAVQNARMPLRFVVQAMFIEQLSTRRSI
LTSTAADNHDHHIDLLRSKNDVSLGAILERDAALRQVSQLKAAMNATSSRIQSLEQELSG
MKKLLNESDQNAKNNSARSASFRLSSENKIDRGQIGSVSSASFRILTARDRAVMGSSNSS
EVSYEKVEKINFSRRFMNGLKSAFRVSKKKTETKVENVKETEDGKQQHGEVVVIKKDVPF
RRQPRSLD*

Transcript Sequence

Transcript ID

PGSC0003DMT400055245
Transcript Infomation

pacid=37428504 locus=PGSC0003DMG400021447 ID=PGSC0003DMT400055245.v4.03 annot-version=v4.03
Sequence

ATGGAAGCCATCAGAAATTGGGCAGATTTAGGGATTGTTGATACTATTTATGAAGACGAT
GCTGAAGATTCCTCTACTTCTTCTCTTTCGATCTCTCCAGGAATCTCCCCATCTCCCCGC
TCTAAGGTCGTCTCCTGGTCACAAGTTACTGGAAATGAGACTGATGTAGTCATACATGTT
GAGAGCTCACGTTTTCGCTTACACAAGGATCCGTTGGCAGCAAGGAGTGGATTTCTGAAA
AGAAAGCTGAAGGGTCTGTCCGAATTAACCCTCTCTCCGCCGTTAAAGATAACGGCCGAA
ACATTCTCTTTGATCGCAGAGTTTTGTTATGACTCGCACATCGTCGTTACGCCGTTTAAC
GTCGCCGCACTTCGTACGGCGGCGGAATTGCTAGAGATGACGGAGGCTAATAACATTGCC
GGTGGCGAAAACTTGGCTCAGAAAACGGAAGCATATTTCCGCCGTGTAATTGCCGTTAAT
CGTGAATATGCATCGATCGTGCTGCGTTCTTGTGTTTCTCTGCTCCCGGAGTGTGAAACG
ACATCGCCACTGTTGAGTAGATGTATTGAAGCGTTAAGTTTGGTAGACAACGGTGACAGC
ATTATGAAGTGCCTCAGCGAAGTTAAAGAGTTGCGGCCTGTGGAATTTCAGTTAATCGTG
ATGTCCATGAATCGGTGGTTGAGTGGAAGCCATGATCAACTCTATAGAGTTGTTGACCTT
TATCTTAAGGAATACAAGGGGAAGATAACAGATGAAGAAAAAATCATAATGTGCAATTAC
ATCGACTGTAGCATCCTTTCGCCACAACTTCTCATGCATGCGGTCCAAAACGCCAGAATG
CCATTAAGGTTTGTGGTCCAAGCCATGTTCATTGAGCAATTGAGCACCCGCCGCTCTATC
CTAACGTCCACTGCTGCTGACAACCACGATCATCACATTGATCTTCTCCGAAGCAAAAAT
GATGTCAGTTTGGGTGCAATTCTCGAGCGAGACGCAGCACTTCGTCAAGTGTCACAGCTT
AAGGCAGCTATGAACGCCACAAGCTCGCGAATCCAGAGTTTAGAGCAAGAGTTGAGTGGC
ATGAAGAAACTTCTTAACGAATCAGATCAAAACGCGAAGAATAACTCTGCTCGCTCTGCT
AGTTTTCGATTGAGTTCCGAGAATAAGATCGATAGAGGACAAATTGGATCAGTTTCATCA
GCAAGCTTCCGGATACTTACCGCTAGAGATAGAGCGGTTATGGGATCGTCTAATTCATCA
GAAGTATCTTACGAGAAAGTGGAAAAGATAAATTTTAGTAGAAGGTTTATGAATGGATTG
AAGAGCGCATTCCGAGTATCAAAGAAGAAAACAGAGACAAAGGTGGAAAACGTAAAAGAG
ACCGAAGATGGTAAACAACAACATGGGGAAGTTGTGGTGATAAAGAAGGATGTGCCTTTT
CGCAGGCAGCCTCGTTCTCTAGATTAA