Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055240
CDS Infomation

pacid=37425681 polypeptide=PGSC0003DMP400037168 locus=PGSC0003DMG400021445 ID=PGSC0003DMT400055240.v4.03 annot-version=v4.03
Sequence

ATGGGGAAGAAACAACACAGTAAAGATCGAATGTTCATAACCAAGACAGAATGGGCAACT
GAATGGGGTGGCGCTAAATCCAAAGAACTTAAAACCCCTTTTAAACGGCTTCCCTTCTAT
TGCTGCGCTCTTACGTTTACACCGTTCGAGGACCCAGTATGCACAAAAGATGGCAATGTC
TTTGAAATAATGCGTATAGTTCCATACATCAGGAAATATGGGAGGAATCCAGTGACTGGG
GCACCTATGAAGCAAGAAGACTTAATTCCTCTTATTTTCCACAAGAATTCTGAAGGAGAG
TATCATTGTCCTGTCTTGAACAAGGTTTTTACAGAGTTCACACATATAGTTGCTGTAAGA
ACTACGGGAAATGTTTTCTGTTATGAGGCAGTTAAAGAACTGAATATCAAAACAAAGAAC
TGGAAGGAGCTTCTCACTGATGAAGCATTCTCTAGAGAAGACCTTATAACAATTCAAAAT
CCTAATGCACTGGACACCAAGGTGCTTCTAGATTTTGATCATGTTAAGAAAAGTTTAAAG
GTTGACGATGAAGAAATACAGAAAATGCAATCTGACCCAACATACAACATAAATATTACT
GGGGACATCAAGCAAATGCTCAAGGAACTTGGAAGTGAGAAAGCGAAAGAGATTGCACTG
CATGGTGGAGGTGGGAACAAGGCACAGAATGAAAGAGCTGCTGCTCTTGAGGCTATTTTA
GCTGCAAGATCACGTATCAAAGATGACGCAAAAACAAAAGAAAATGGTGAAGGAACAGCA
AAGCAGACTTTCAGTATTGTGGATGCTGCATCTGCATCAGTTCATGGAAGAAGTGCTGCT
GCTGCAAAGGCTGGTTCAACTGATAAAACAGCTGCGCGGATAGCTTTGCACATGGCGGGT
GAAAGGACTCCAGTAAATGCTAAGCTGGTTAAGAGTCGTTTTACCACTGGTGCTGCTTCT
CGATCCTTCACTTCCACCTCCTATGATCCGGTAACAAAGAACGAATACGAATATGTTAAA
GTTGAGAAAAATCCCAAGAAGAAAGGTTATGTCCAGCTGCATACAACACATGGTGATTTG
AACATTGAGCTTCATTGTGACATAACTCCAAGGGCATGTGAGAACTTCATTACTCTTTGT
GAACAAGGATATTATAATGGAGTAGCTTTTCACAGAAACATCCGGAATTTCATGATTCAA
GGCGGTGACCCAACTGGCACAGGGAAAGGAGGTGAGTCGATCTGGGGTAAGCCCTTCAAG
GATGAAGTGCACTCTAAGTTGCTGCATTCTGGTAGAGGTGTTGTTAGCATGGCTAACTCC
GGTCCTCACTCAAATGGCTCACAGTTCTTCATCCTGTACAAGTCTGCCACTCACTTAAAT
TTCAAACATACGGTCTTTGGTATGGTTGTTGGAGGCTTGCCAACACTTTCCACCATGGAG
AAAGTCCCTGTTGATGACGATGACCGACCTCTGGAAGAAATCAAGATAATAAGTGTAGAA
GTTTATGTAAACCCCTATGCAGAGCTTGATGAAGAAGAGGAGAAAACAAATGATGACAAC
AAAACTGAAGATGAAGACAATGAGAAGGTTGGATCATGGTACAGCAACCCTGGAACTGGA
ACCTCAGATATTCAAGCTGTTGGCAGTGGTATTGGGAAGTATTTGAAAGCAAGGGCTGCA
CAGGCCGATTCCAAAACTTCTTCTGATAGCAGTCTGCCACCTATTTATGCAGCAAAGAAG
AGAAAAACAGGCACATCAACAGCAGAACTTAAAGATTTTTCAGCATGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037168
PEP Infomation

pacid=37425681 transcript=PGSC0003DMT400055240 locus=PGSC0003DMG400021445 ID=PGSC0003DMT400055240.v4.03 annot-version=v4.03
Sequence

MGKKQHSKDRMFITKTEWATEWGGAKSKELKTPFKRLPFYCCALTFTPFEDPVCTKDGNV
FEIMRIVPYIRKYGRNPVTGAPMKQEDLIPLIFHKNSEGEYHCPVLNKVFTEFTHIVAVR
TTGNVFCYEAVKELNIKTKNWKELLTDEAFSREDLITIQNPNALDTKVLLDFDHVKKSLK
VDDEEIQKMQSDPTYNINITGDIKQMLKELGSEKAKEIALHGGGGNKAQNERAAALEAIL
AARSRIKDDAKTKENGEGTAKQTFSIVDAASASVHGRSAAAAKAGSTDKTAARIALHMAG
ERTPVNAKLVKSRFTTGAASRSFTSTSYDPVTKNEYEYVKVEKNPKKKGYVQLHTTHGDL
NIELHCDITPRACENFITLCEQGYYNGVAFHRNIRNFMIQGGDPTGTGKGGESIWGKPFK
DEVHSKLLHSGRGVVSMANSGPHSNGSQFFILYKSATHLNFKHTVFGMVVGGLPTLSTME
KVPVDDDDRPLEEIKIISVEVYVNPYAELDEEEEKTNDDNKTEDEDNEKVGSWYSNPGTG
TSDIQAVGSGIGKYLKARAAQADSKTSSDSSLPPIYAAKKRKTGTSTAELKDFSAW*

Transcript Sequence

Transcript ID

PGSC0003DMT400055240
Transcript Infomation

pacid=37425681 locus=PGSC0003DMG400021445 ID=PGSC0003DMT400055240.v4.03 annot-version=v4.03
Sequence

ATGGGGAAGAAACAACACAGTAAAGATCGAATGTTCATAACCAAGACAGAATGGGCAACT
GAATGGGGTGGCGCTAAATCCAAAGAACTTAAAACCCCTTTTAAACGGCTTCCCTTCTAT
TGCTGCGCTCTTACGTTTACACCGTTCGAGGACCCAGTATGCACAAAAGATGGCAATGTC
TTTGAAATAATGCGTATAGTTCCATACATCAGGAAATATGGGAGGAATCCAGTGACTGGG
GCACCTATGAAGCAAGAAGACTTAATTCCTCTTATTTTCCACAAGAATTCTGAAGGAGAG
TATCATTGTCCTGTCTTGAACAAGGTTTTTACAGAGTTCACACATATAGTTGCTGTAAGA
ACTACGGGAAATGTTTTCTGTTATGAGGCAGTTAAAGAACTGAATATCAAAACAAAGAAC
TGGAAGGAGCTTCTCACTGATGAAGCATTCTCTAGAGAAGACCTTATAACAATTCAAAAT
CCTAATGCACTGGACACCAAGGTGCTTCTAGATTTTGATCATGTTAAGAAAAGTTTAAAG
GTTGACGATGAAGAAATACAGAAAATGCAATCTGACCCAACATACAACATAAATATTACT
GGGGACATCAAGCAAATGCTCAAGGAACTTGGAAGTGAGAAAGCGAAAGAGATTGCACTG
CATGGTGGAGGTGGGAACAAGGCACAGAATGAAAGAGCTGCTGCTCTTGAGGCTATTTTA
GCTGCAAGATCACGTATCAAAGATGACGCAAAAACAAAAGAAAATGGTGAAGGAACAGCA
AAGCAGACTTTCAGTATTGTGGATGCTGCATCTGCATCAGTTCATGGAAGAAGTGCTGCT
GCTGCAAAGGCTGGTTCAACTGATAAAACAGCTGCGCGGATAGCTTTGCACATGGCGGGT
GAAAGGACTCCAGTAAATGCTAAGCTGGTTAAGAGTCGTTTTACCACTGGTGCTGCTTCT
CGATCCTTCACTTCCACCTCCTATGATCCGGTAACAAAGAACGAATACGAATATGTTAAA
GTTGAGAAAAATCCCAAGAAGAAAGGTTATGTCCAGCTGCATACAACACATGGTGATTTG
AACATTGAGCTTCATTGTGACATAACTCCAAGGGCATGTGAGAACTTCATTACTCTTTGT
GAACAAGGATATTATAATGGAGTAGCTTTTCACAGAAACATCCGGAATTTCATGATTCAA
GGCGGTGACCCAACTGGCACAGGGAAAGGAGGTGAGTCGATCTGGGGTAAGCCCTTCAAG
GATGAAGTGCACTCTAAGTTGCTGCATTCTGGTAGAGGTGTTGTTAGCATGGCTAACTCC
GGTCCTCACTCAAATGGCTCACAGTTCTTCATCCTGTACAAGTCTGCCACTCACTTAAAT
TTCAAACATACGGTCTTTGGTATGGTTGTTGGAGGCTTGCCAACACTTTCCACCATGGAG
AAAGTCCCTGTTGATGACGATGACCGACCTCTGGAAGAAATCAAGATAATAAGTGTAGAA
GTTTATGTAAACCCCTATGCAGAGCTTGATGAAGAAGAGGAGAAAACAAATGATGACAAC
AAAACTGAAGATGAAGACAATGAGAAGGTTGGATCATGGTACAGCAACCCTGGAACTGGA
ACCTCAGATATTCAAGCTGTTGGCAGTGGTATTGGGAAGTATTTGAAAGCAAGGGCTGCA
CAGGCCGATTCCAAAACTTCTTCTGATAGCAGTCTGCCACCTATTTATGCAGCAAAGAAG
AGAAAAACAGGCACATCAACAGCAGAACTTAAAGATTTTTCAGCATGGTAA