Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055225
CDS Infomation

pacid=37428983 polypeptide=PGSC0003DMP400037154 locus=PGSC0003DMG400021438 ID=PGSC0003DMT400055225.v4.03 annot-version=v4.03
Sequence

ATGGATAAGGGCAAAGAGAAATTGACTGCTAATGAGGATAATCAATTATTGTCTCCTTCC
AAGGAAGGGAAAGGAAAGAGATTATGGAAGAAAGTGAAGTACCAGCTTGTGGAGTATCAT
TCATTGCCTGGGTATTTGAAAGACAACGAATACATTCTGGGTCATTACCGGGCCGAATGG
CCATTGAAGCAAGCATTGCTCAGCATCTTCACAATTCACAATGAGACCCTAAATGTTTGG
ACGCATTTGATAGGGTTCTTCCTCTTCCTTGCGCTGACCATTTATACTGCAACCAAAGTT
CCCAAGGTTGTAGATCTACATTCCTTACAGAATCTGCCTGATGTGCTGAGGAAGGCTGAT
TTGCACAAATTACAAGCAGAACTTTTAACTTGTCTTCCTTCTTTGCCGCATATGCCTGAT
TTGCACAAACTTCGAGATGGTTTGCTACGTTCCCCCTCTAATTGGCATATTATTGACCTC
CTGAACAACTGCCTGCCTGAGCGATTTTCCCACAGCAACCATACAGATGTCTGTGTACTG
CGGAGTGTAAAGGAAGATGTGGCAAATATATTAGCACCATTGCTGGTGAGACCAATAACG
CGCTGGCCATTCTATGCCTTCCTTGGTGGGGCAATGTTTTGTTTGTTAGCAAGCAGCACA
TGTCATTTACTTTCTTGCCATTCAAAGCGTTTATCATACATCATGCTGAGGCTCGACTAT
GCCGGTATCGCTGCCCTGATATCAACTTCATTTTACCCTCCGGTCTATTATTCCTTCATG
TGTTACCCCTTCTTTTGCAATCTGTACCTGGGATTTATTACCCTCCTGGGAATTGGCACA
ATCTTGGGTTCCCTACTTCCTGTGTTCCAGACTCCAGAATATCGAGTTATTCGAGCATCT
CTATTTTTCGGAATGGGCCTGTCAGGTGCGGTACCTATTCTGCACAAGCTGGTTTTGTTT
TGGCACCAACCTGAGGCGCTTCATACGACTGGATATGAACTTTTGATGGGCATATTTTAC
GGCATTGGAGCACTGATATATGCCATGAGAGTTCCAGAAAGATGGATGCCTGGGAAGTTT
GACATTGCTGGCCACAGCCACCAACTATTTCATGTACTCGTGGTGGCAGGGGCTTATACT
CATTACCACGCTGGATTGGTTTATCTGAGGTGGCGGGACCTGCAAGGGTGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037154
PEP Infomation

pacid=37428983 transcript=PGSC0003DMT400055225 locus=PGSC0003DMG400021438 ID=PGSC0003DMT400055225.v4.03 annot-version=v4.03
Sequence

MDKGKEKLTANEDNQLLSPSKEGKGKRLWKKVKYQLVEYHSLPGYLKDNEYILGHYRAEW
PLKQALLSIFTIHNETLNVWTHLIGFFLFLALTIYTATKVPKVVDLHSLQNLPDVLRKAD
LHKLQAELLTCLPSLPHMPDLHKLRDGLLRSPSNWHIIDLLNNCLPERFSHSNHTDVCVL
RSVKEDVANILAPLLVRPITRWPFYAFLGGAMFCLLASSTCHLLSCHSKRLSYIMLRLDY
AGIAALISTSFYPPVYYSFMCYPFFCNLYLGFITLLGIGTILGSLLPVFQTPEYRVIRAS
LFFGMGLSGAVPILHKLVLFWHQPEALHTTGYELLMGIFYGIGALIYAMRVPERWMPGKF
DIAGHSHQLFHVLVVAGAYTHYHAGLVYLRWRDLQGC*

Transcript Sequence

Transcript ID

PGSC0003DMT400055225
Transcript Infomation

pacid=37428983 locus=PGSC0003DMG400021438 ID=PGSC0003DMT400055225.v4.03 annot-version=v4.03
Sequence

ATGGATAAGGGCAAAGAGAAATTGACTGCTAATGAGGATAATCAATTATTGTCTCCTTCC
AAGGAAGGGAAAGGAAAGAGATTATGGAAGAAAGTGAAGTACCAGCTTGTGGAGTATCAT
TCATTGCCTGGGTATTTGAAAGACAACGAATACATTCTGGGTCATTACCGGGCCGAATGG
CCATTGAAGCAAGCATTGCTCAGCATCTTCACAATTCACAATGAGACCCTAAATGTTTGG
ACGCATTTGATAGGGTTCTTCCTCTTCCTTGCGCTGACCATTTATACTGCAACCAAAGTT
CCCAAGGTTGTAGATCTACATTCCTTACAGAATCTGCCTGATGTGCTGAGGAAGGCTGAT
TTGCACAAATTACAAGCAGAACTTTTAACTTGTCTTCCTTCTTTGCCGCATATGCCTGAT
TTGCACAAACTTCGAGATGGTTTGCTACGTTCCCCCTCTAATTGGCATATTATTGACCTC
CTGAACAACTGCCTGCCTGAGCGATTTTCCCACAGCAACCATACAGATGTCTGTGTACTG
CGGAGTGTAAAGGAAGATGTGGCAAATATATTAGCACCATTGCTGGTGAGACCAATAACG
CGCTGGCCATTCTATGCCTTCCTTGGTGGGGCAATGTTTTGTTTGTTAGCAAGCAGCACA
TGTCATTTACTTTCTTGCCATTCAAAGCGTTTATCATACATCATGCTGAGGCTCGACTAT
GCCGGTATCGCTGCCCTGATATCAACTTCATTTTACCCTCCGGTCTATTATTCCTTCATG
TGTTACCCCTTCTTTTGCAATCTGTACCTGGGATTTATTACCCTCCTGGGAATTGGCACA
ATCTTGGGTTCCCTACTTCCTGTGTTCCAGACTCCAGAATATCGAGTTATTCGAGCATCT
CTATTTTTCGGAATGGGCCTGTCAGGTGCGGTACCTATTCTGCACAAGCTGGTTTTGTTT
TGGCACCAACCTGAGGCGCTTCATACGACTGGATATGAACTTTTGATGGGCATATTTTAC
GGCATTGGAGCACTGATATATGCCATGAGAGTTCCAGAAAGATGGATGCCTGGGAAGTTT
GACATTGCTGGCCACAGCCACCAACTATTTCATGTACTCGTGGTGGCAGGGGCTTATACT
CATTACCACGCTGGATTGGTTTATCTGAGGTGGCGGGACCTGCAAGGGTGCTAA