Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055222
CDS Infomation

pacid=37428984 polypeptide=PGSC0003DMP400037151 locus=PGSC0003DMG400021436 ID=PGSC0003DMT400055222.v4.03 annot-version=v4.03
Sequence

ATGTCATGGTTTGCTCGATCCATTGCCAATACTCTCAGACTCGACGACGACGACGATAGG
GACGATGACGTTTCAAGCAATCACGATCACTCTACTGAAAAACCTACTACGGAGAAGCAA
CAAACAGATGATGATGATTCACCGCCAGTATCACCATCACGCGGCGTCAAGGATGACTTC
TCAGAGCTCACCAAAACCCTAACCCGTCAATTTTGGGGAGTGGCCTCTTTCCTGGCTCCA
CCGCCCCAATCCGAGCCTGATAAGCTTTTACTGGATCCGAATTCTGGACCAGCTCGAGTT
TCGGATGACGAAGAGTCCGATCCTGCGGGGATCGCGGGTTTGCGGAGCGATATTGCTGAA
ATTGGGGGCAGATTCAAGAGTGGGATATCTAAGCTTTCGAAGAATATTCCCGTGTCCGAA
ATCACCAAAATGGCTTCCAACTTACTGCAACTGGGACCAGAGGAGGAGGACGACGAAGAG
GGTAAGAGGTTTGATTCCGGTAGAGGTGCAGTTGGTGTTACTGAGGAAGTAGTGGCTTTT
GTGAGGAACATTGCTATGCATCCTGAGACTTGGTTGGATTTCCCTTTGTTTGATGATGAA
GACGACGAAGTAGATTTTGACTTGTCTGATGCACAACAAGAGCATGCATTAGCTGTCGAG
CGTCTTGCTCCAAGACTGGCTGCTTTGAGGATTGAGCTCTGCCCAGGTTACATGAGTGAG
GCTCGCTTTTGGGAGATTTACTTTGTTCTTCTGCACCCTAGACTGGATAAACAAGATGCT
GAACTTTTATCCACACCCCAGGTAGTCAAGGCCAGGGCGTCATTGGCGCAAGAGTTACAT
AAACGAACCAAGCCAATAGAAGGAGATTGGTCAAAGGAGGAGACTTTTAAATCAACCGAC
ATGGGTGGTTTTCAACAGGAGGAGATGCTTGCTGTCCCGTCCGCTGCTCTCTCTGCAGTT
GTGGTTCAAGACATGTCTAGTGTGGATGTTGGCACTTCATCTATAGTGGCTAGCTGTGGT
ACCGATGTGCACCCTGTCATTAGTGAAAATCAAACAGTTGATAAACTTGTGGTTGAAGAA
AGACCTATTACCCTAAGCAAAGATGAAAAATTGCAATCTGCATCGGCGACTAAGTTAGAG
GAGAGTGACGAAGAGGATGCTGATGATTGGTTGAAGGAAGAAAACACGGAAATTACAGGT
ACCAGTAAAACCAGCATGTCCTTTGAGGATGATGAGGATGTGTCCTTCAGTGATCTTGAA
GAGGATGATTCAGATATGCCTGCAAAATCAAAGCTGGCAATTCACAGTTCTGATAAGGAC
TCACAAGATTGGGTCCAGTTGAGGAAAAGCTCCACTGACTTGTCTAGAGATACCAGCTCC
ATCAATCAGATTGGTTCTGTTAAGGAAAATGTGCAGAATCCTGATAGCAAAGAACCAAAT
GATTGGCTGGATATTGATGACCTTGAGATGGCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400037151
PEP Infomation

pacid=37428984 transcript=PGSC0003DMT400055222 locus=PGSC0003DMG400021436 ID=PGSC0003DMT400055222.v4.03 annot-version=v4.03
Sequence

MSWFARSIANTLRLDDDDDRDDDVSSNHDHSTEKPTTEKQQTDDDDSPPVSPSRGVKDDF
SELTKTLTRQFWGVASFLAPPPQSEPDKLLLDPNSGPARVSDDEESDPAGIAGLRSDIAE
IGGRFKSGISKLSKNIPVSEITKMASNLLQLGPEEEDDEEGKRFDSGRGAVGVTEEVVAF
VRNIAMHPETWLDFPLFDDEDDEVDFDLSDAQQEHALAVERLAPRLAALRIELCPGYMSE
ARFWEIYFVLLHPRLDKQDAELLSTPQVVKARASLAQELHKRTKPIEGDWSKEETFKSTD
MGGFQQEEMLAVPSAALSAVVVQDMSSVDVGTSSIVASCGTDVHPVISENQTVDKLVVEE
RPITLSKDEKLQSASATKLEESDEEDADDWLKEENTEITGTSKTSMSFEDDEDVSFSDLE
EDDSDMPAKSKLAIHSSDKDSQDWVQLRKSSTDLSRDTSSINQIGSVKENVQNPDSKEPN
DWLDIDDLEMA*

Transcript Sequence

Transcript ID

PGSC0003DMT400055222
Transcript Infomation

pacid=37428984 locus=PGSC0003DMG400021436 ID=PGSC0003DMT400055222.v4.03 annot-version=v4.03
Sequence

ATGTCATGGTTTGCTCGATCCATTGCCAATACTCTCAGACTCGACGACGACGACGATAGG
GACGATGACGTTTCAAGCAATCACGATCACTCTACTGAAAAACCTACTACGGAGAAGCAA
CAAACAGATGATGATGATTCACCGCCAGTATCACCATCACGCGGCGTCAAGGATGACTTC
TCAGAGCTCACCAAAACCCTAACCCGTCAATTTTGGGGAGTGGCCTCTTTCCTGGCTCCA
CCGCCCCAATCCGAGCCTGATAAGCTTTTACTGGATCCGAATTCTGGACCAGCTCGAGTT
TCGGATGACGAAGAGTCCGATCCTGCGGGGATCGCGGGTTTGCGGAGCGATATTGCTGAA
ATTGGGGGCAGATTCAAGAGTGGGATATCTAAGCTTTCGAAGAATATTCCCGTGTCCGAA
ATCACCAAAATGGCTTCCAACTTACTGCAACTGGGACCAGAGGAGGAGGACGACGAAGAG
GGTAAGAGGTTTGATTCCGGTAGAGGTGCAGTTGGTGTTACTGAGGAAGTAGTGGCTTTT
GTGAGGAACATTGCTATGCATCCTGAGACTTGGTTGGATTTCCCTTTGTTTGATGATGAA
GACGACGAAGTAGATTTTGACTTGTCTGATGCACAACAAGAGCATGCATTAGCTGTCGAG
CGTCTTGCTCCAAGACTGGCTGCTTTGAGGATTGAGCTCTGCCCAGGTTACATGAGTGAG
GCTCGCTTTTGGGAGATTTACTTTGTTCTTCTGCACCCTAGACTGGATAAACAAGATGCT
GAACTTTTATCCACACCCCAGGTAGTCAAGGCCAGGGCGTCATTGGCGCAAGAGTTACAT
AAACGAACCAAGCCAATAGAAGGAGATTGGTCAAAGGAGGAGACTTTTAAATCAACCGAC
ATGGGTGGTTTTCAACAGGAGGAGATGCTTGCTGTCCCGTCCGCTGCTCTCTCTGCAGTT
GTGGTTCAAGACATGTCTAGTGTGGATGTTGGCACTTCATCTATAGTGGCTAGCTGTGGT
ACCGATGTGCACCCTGTCATTAGTGAAAATCAAACAGTTGATAAACTTGTGGTTGAAGAA
AGACCTATTACCCTAAGCAAAGATGAAAAATTGCAATCTGCATCGGCGACTAAGTTAGAG
GAGAGTGACGAAGAGGATGCTGATGATTGGTTGAAGGAAGAAAACACGGAAATTACAGGT
ACCAGTAAAACCAGCATGTCCTTTGAGGATGATGAGGATGTGTCCTTCAGTGATCTTGAA
GAGGATGATTCAGATATGCCTGCAAAATCAAAGCTGGCAATTCACAGTTCTGATAAGGAC
TCACAAGATTGGGTCCAGTTGAGGAAAAGCTCCACTGACTTGTCTAGAGATACCAGCTCC
ATCAATCAGATTGGTTCTGTTAAGGAAAATGTGCAGAATCCTGATAGCAAAGAACCAAAT
GATTGGCTGGATATTGATGACCTTGAGATGGCATGA