Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055219
CDS Infomation

pacid=37427752 polypeptide=PGSC0003DMP400037148 locus=PGSC0003DMG400021435 ID=PGSC0003DMT400055219.v4.03 annot-version=v4.03
Sequence

ATGGCTTTGAATTATGCGGATTTAAAGCTATTAAGGAAGGGTTTGGGTTATACTAGGAGA
AATAGGAACTGGGTTGTTGCTTTAGGAGCTCTAGGTGTTACTGGTTATGGCGCTTATAGG
GCTTATTACTCACCCTCTATGGTTAGAAAGAGGAAAAGATTTTTGAAGCTCATAAGTGCT
TTTGTTTCTTTAGCTGAGATGGTGGCTGATTCTGCTGATGTAATTGGGATTGTTTCGAAA
GATCTGAAGGAATTCATTTCCTCTGACTCTGATCATATTCCTAGAAGTTTGAAACAGATT
TCTAAGATTGCTAAATCAGATGAGTTTTCACAATCTATTGTTAAGGTCACTAGTGCGTTG
ACCGTAGGAGTTGTGCGAGGCTACCAGCAAGAAACTGCGGAAAATGGTGTTTCTGGGGCT
GCAAATTCTGGGCTTTTTGACCAGGTTTTAGATAAACTGTTTACTGATGCAGGGTCTGGT
TTTGCTTCTGTAATTGTTGGGAGCTTCGCGAGGAATTTGGTTCTTGCTTATTGTTCGGAC
AAAAAAGGCAATGCTACTGATTCTGATATTGAACACTCTGTTCCAGGATGGGCTGATGTT
CTATGCCAGGACAAGTGCAGAGAACTTATAGGAAATTGTATACAATTGTTTGTGAGTACT
GCAGTTGCTGTGTATCTTGATAGAACAATGAACATCAACACCTACAATGAAATCTTTTCT
GGGTTAACAAATCCCAAGCATGAAACCAAAATGAGAGATATGTTAGTAGCCATATGTAGT
GGTGCCATTGGAACTTTTGTCAAAACTTCTCATCAAGTTTTGACAAATGGTGATATGGAT
ACAACTTCGGAAATATATTCGTCTATGCCACTTAGTTTCAAAGCCAAGAAATTTTGGGAC
GAAGATGAGAACATGTACACTGGGTGGACAAATAAAGTATCTTCTACTTTGGCAGTGCCA
AGAAATAGAAGGTTTATTCTTGATTTGACTGGGAGGGTCACCTTTGAGAGTGTTAGATCT
TTCTTGGAGTTTCTTCTGGAAAAGTTGTATGAGTGTGTGCGAAAAAGCATAGATGTTGTC
CAGGAGGAAGTTGTGACTCTGAGAAGAAGTGTAGATGTTATACAAGAGGAAGTGGTTGAT
AGGAGTAGTGAAGCTTGCAGGTATGTGAGTGGGAAATCTTCTATTGCTGTTAGTGTATGC
CTCGCTTTGTGTTTGCACATACTTAATGGTCCTTGGATCTTGGTTCCAAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400037148
PEP Infomation

pacid=37427752 transcript=PGSC0003DMT400055219 locus=PGSC0003DMG400021435 ID=PGSC0003DMT400055219.v4.03 annot-version=v4.03
Sequence

MALNYADLKLLRKGLGYTRRNRNWVVALGALGVTGYGAYRAYYSPSMVRKRKRFLKLISA
FVSLAEMVADSADVIGIVSKDLKEFISSDSDHIPRSLKQISKIAKSDEFSQSIVKVTSAL
TVGVVRGYQQETAENGVSGAANSGLFDQVLDKLFTDAGSGFASVIVGSFARNLVLAYCSD
KKGNATDSDIEHSVPGWADVLCQDKCRELIGNCIQLFVSTAVAVYLDRTMNINTYNEIFS
GLTNPKHETKMRDMLVAICSGAIGTFVKTSHQVLTNGDMDTTSEIYSSMPLSFKAKKFWD
EDENMYTGWTNKVSSTLAVPRNRRFILDLTGRVTFESVRSFLEFLLEKLYECVRKSIDVV
QEEVVTLRRSVDVIQEEVVDRSSEACRYVSGKSSIAVSVCLALCLHILNGPWILVPN*

Transcript Sequence

Transcript ID

PGSC0003DMT400055219
Transcript Infomation

pacid=37427752 locus=PGSC0003DMG400021435 ID=PGSC0003DMT400055219.v4.03 annot-version=v4.03
Sequence

ATGGCTTTGAATTATGCGGATTTAAAGCTATTAAGGAAGGGTTTGGGTTATACTAGGAGA
AATAGGAACTGGGTTGTTGCTTTAGGAGCTCTAGGTGTTACTGGTTATGGCGCTTATAGG
GCTTATTACTCACCCTCTATGGTTAGAAAGAGGAAAAGATTTTTGAAGCTCATAAGTGCT
TTTGTTTCTTTAGCTGAGATGGTGGCTGATTCTGCTGATGTAATTGGGATTGTTTCGAAA
GATCTGAAGGAATTCATTTCCTCTGACTCTGATCATATTCCTAGAAGTTTGAAACAGATT
TCTAAGATTGCTAAATCAGATGAGTTTTCACAATCTATTGTTAAGGTCACTAGTGCGTTG
ACCGTAGGAGTTGTGCGAGGCTACCAGCAAGAAACTGCGGAAAATGGTGTTTCTGGGGCT
GCAAATTCTGGGCTTTTTGACCAGGTTTTAGATAAACTGTTTACTGATGCAGGGTCTGGT
TTTGCTTCTGTAATTGTTGGGAGCTTCGCGAGGAATTTGGTTCTTGCTTATTGTTCGGAC
AAAAAAGGCAATGCTACTGATTCTGATATTGAACACTCTGTTCCAGGATGGGCTGATGTT
CTATGCCAGGACAAGTGCAGAGAACTTATAGGAAATTGTATACAATTGTTTGTGAGTACT
GCAGTTGCTGTGTATCTTGATAGAACAATGAACATCAACACCTACAATGAAATCTTTTCT
GGGTTAACAAATCCCAAGCATGAAACCAAAATGAGAGATATGTTAGTAGCCATATGTAGT
GGTGCCATTGGAACTTTTGTCAAAACTTCTCATCAAGTTTTGACAAATGGTGATATGGAT
ACAACTTCGGAAATATATTCGTCTATGCCACTTAGTTTCAAAGCCAAGAAATTTTGGGAC
GAAGATGAGAACATGTACACTGGGTGGACAAATAAAGTATCTTCTACTTTGGCAGTGCCA
AGAAATAGAAGGTTTATTCTTGATTTGACTGGGAGGGTCACCTTTGAGAGTGTTAGATCT
TTCTTGGAGTTTCTTCTGGAAAAGTTGTATGAGTGTGTGCGAAAAAGCATAGATGTTGTC
CAGGAGGAAGTTGTGACTCTGAGAAGAAGTGTAGATGTTATACAAGAGGAAGTGGTTGAT
AGGAGTAGTGAAGCTTGCAGGTATGTGAGTGGGAAATCTTCTATTGCTGTTAGTGTATGC
CTCGCTTTGTGTTTGCACATACTTAATGGTCCTTGGATCTTGGTTCCAAATTAG