Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055201
CDS Infomation

pacid=37427364 polypeptide=PGSC0003DMP400037133 locus=PGSC0003DMG400021424 ID=PGSC0003DMT400055201.v4.03 annot-version=v4.03
Sequence

ATGGATGAGAGCTTCAGAGTACGGGTGGACAAAGTGTTCGGGTCTCTGACGGAGACCTCC
AATTTGAGCTCTCTCTGGTGTTTAACCGACGATGAAATTGAGAAAAGGGAATGGAATAGG
GATACCCCATCCCGCGACCTACTCGACTTTGATTCCAAACCCTGCCCTCCCCATATTGAC
GGCTTCTTCTCCAAGTCCCCCCAAACCCTAGATTTTCCCAAACAGCTCCACTCCGATCTG
GAACAGCTCAGCGACGGCCAAGAACCAGATGATGATAATGAATCGGATATCCGCGCCCGC
ATTGGTTTAGATTGCACCCTTGACTATGAGGAGGAAGAAGACGAGTTTGACAAAGTGGCC
GTCGATACGGAAAAGGAGAAGCAGCAGCCTAGTGACCGCTTGTACACGCGGGAGGTCTCT
GACTACGGAATTTCTGCAGACACAGACCATGAGCTTCCTCTTACTCTCCATGACATTACG
AGAGATCCTCGTGCTAATCACGAGGCCGCCAAGCTCAGACTCAAGGAAGATGCGGAGGCT
GCCCTGAGAGAAGGTCATTTAGGTTCCAAGCCACCTACTGTGTACAAGACTCAAGATTAT
GTAAGGAATCCATCCAAGTATACTTGCTATACACTTGATGTCTCGGATGATATGGATGAA
GAATCCAATAGAAACGCTTACATGGACTTTCTCAGTCTCATGAAGAAGGGATCGCACCTG
TATAATGATAGCTCCACTAATTTTGAAAAATCGCCCACATTTAACCTGAGAATGAAACAG
CCTGTTGTTACCTTCAACAAACAGGGCGTTAAGGCAGAGCAAATGCAAGTGAAAAAAACA
GTTCCCCTTAGTATTGTTACCATGGAATCCGATAATGCTGCCATGGAAGAAGATGAATCG
TCTATTGCAGCCGATAGAGCTAGACCTGGAAGTTTGCATAAGCCTGGCAAACGTTATAGA
ACTAGGGCCACTATGATGGATACTGATGACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400037133
PEP Infomation

pacid=37427364 transcript=PGSC0003DMT400055201 locus=PGSC0003DMG400021424 ID=PGSC0003DMT400055201.v4.03 annot-version=v4.03
Sequence

MDESFRVRVDKVFGSLTETSNLSSLWCLTDDEIEKREWNRDTPSRDLLDFDSKPCPPHID
GFFSKSPQTLDFPKQLHSDLEQLSDGQEPDDDNESDIRARIGLDCTLDYEEEEDEFDKVA
VDTEKEKQQPSDRLYTREVSDYGISADTDHELPLTLHDITRDPRANHEAAKLRLKEDAEA
ALREGHLGSKPPTVYKTQDYVRNPSKYTCYTLDVSDDMDEESNRNAYMDFLSLMKKGSHL
YNDSSTNFEKSPTFNLRMKQPVVTFNKQGVKAEQMQVKKTVPLSIVTMESDNAAMEEDES
SIAADRARPGSLHKPGKRYRTRATMMDTDD*

Transcript Sequence

Transcript ID

PGSC0003DMT400055201
Transcript Infomation

pacid=37427364 locus=PGSC0003DMG400021424 ID=PGSC0003DMT400055201.v4.03 annot-version=v4.03
Sequence

ATGGATGAGAGCTTCAGAGTACGGGTGGACAAAGTGTTCGGGTCTCTGACGGAGACCTCC
AATTTGAGCTCTCTCTGGTGTTTAACCGACGATGAAATTGAGAAAAGGGAATGGAATAGG
GATACCCCATCCCGCGACCTACTCGACTTTGATTCCAAACCCTGCCCTCCCCATATTGAC
GGCTTCTTCTCCAAGTCCCCCCAAACCCTAGATTTTCCCAAACAGCTCCACTCCGATCTG
GAACAGCTCAGCGACGGCCAAGAACCAGATGATGATAATGAATCGGATATCCGCGCCCGC
ATTGGTTTAGATTGCACCCTTGACTATGAGGAGGAAGAAGACGAGTTTGACAAAGTGGCC
GTCGATACGGAAAAGGAGAAGCAGCAGCCTAGTGACCGCTTGTACACGCGGGAGGTCTCT
GACTACGGAATTTCTGCAGACACAGACCATGAGCTTCCTCTTACTCTCCATGACATTACG
AGAGATCCTCGTGCTAATCACGAGGCCGCCAAGCTCAGACTCAAGGAAGATGCGGAGGCT
GCCCTGAGAGAAGGTCATTTAGGTTCCAAGCCACCTACTGTGTACAAGACTCAAGATTAT
GTAAGGAATCCATCCAAGTATACTTGCTATACACTTGATGTCTCGGATGATATGGATGAA
GAATCCAATAGAAACGCTTACATGGACTTTCTCAGTCTCATGAAGAAGGGATCGCACCTG
TATAATGATAGCTCCACTAATTTTGAAAAATCGCCCACATTTAACCTGAGAATGAAACAG
CCTGTTGTTACCTTCAACAAACAGGGCGTTAAGGCAGAGCAAATGCAAGTGAAAAAAACA
GTTCCCCTTAGTATTGTTACCATGGAATCCGATAATGCTGCCATGGAAGAAGATGAATCG
TCTATTGCAGCCGATAGAGCTAGACCTGGAAGTTTGCATAAGCCTGGCAAACGTTATAGA
ACTAGGGCCACTATGATGGATACTGATGACTGA