Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055176
CDS Infomation

pacid=37428881 polypeptide=PGSC0003DMP400037113 locus=PGSC0003DMG400021414 ID=PGSC0003DMT400055176.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTTTGTGTGGCAATAGTATTTGGACTCCTCAAGCTCGAAATTGTTTTCAGCGG
GGAATAACTAGTTTTAATTCGTTAAAGTTTTTACCTTTTCAAGTTAATCGTTGTAAGAGA
TTGTGGAGTAGGTCATTGAAGTGCAGGGTTTTGGGGGAAACGGACGATGTGGGTTTTGAA
GTGAGTAGTGCCATAAAAGACGATCTATTTGTTGGGTTTTTCAGAGAAGCATGGCCTTAC
TTTCTTGCACATCGAGGAAGCACGTTTGTTGTTTTAATCTCAGCTGAAATTGTTGATAGC
CCTCATTTGGATCATCTTCTCATGGATATCTCCCTCCTTCATGGTCTGGGAATCAAATTT
GTTCTTGTACCAGGAACTCATGTTCAGATTGACCGGCTTCTGACTGAAAGGGGAAGTGAG
GCCAAGTATGTAGGCCGCTACAGAATTACAGACCCTGATTCACTCGAGGCAGCTATGGAT
ACATCTGGAAGAATTCGTCTCATGATAGAGGCGAAGTTGTCACCTGGCCCTTCATTGACT
GGTGTCCGCCGACATGGAGATAATAGTCGCTGGCATGATAGTGTTGGTGTTGCCAGTGGT
AATTTTCTATCAGCGAAGAAAAGAGGAGTTGTCGAAGGAATTGATTATGCTTCAACTGGT
GAAGTAAAGAAGGTAGATGTTTCTCGAATTCGCGAGAGGCTTGATCAGGATTCCATAGTG
CTATTGAGCAATCTTGGTTATTCCAGCTCTGGAGAAGTATTAAACTGCAACACATATGAG
GTTGCAACAGCTTGTGCCTTGGCTCTAGGAGCAGAAAAACTAATTTGTATCATAGACGGC
CCAATTCTTGATGAGTCTAGCCGTCTCATTCGTTTCTTAACTCTTCAAGATGCTGATATG
CTGGTCCGCAGACGAGCTGAGCAAAGTGAGACTGCTGCTAATTATGTAAAAGCTGTTAGT
CAGGAGGACTTCAATCGTTTAGGTTACCATGGTTCCAATGGATCGCTCCCTTCCCAAAAT
GGTGATGTTTATAGCCAAAGATACAATCCCACATTTCAGAATGGCATTGGTTTTGACAAT
GGAAATGGGCTTTGGTCTAGTGAACAAGGTTTTGCAATTGGAGGACAAGAGAAACTAAGC
CGATCAAATGGTTACCTCTCAGAATTAGCTGCTGCTGCTTTTGTTTGCCGAGGAGGTGTT
CAAAGAGTGCACCTGCTGGATGGCACTATTGGTGGAGTTTTACTAAAGGAATTGTTCCAA
AGAGATGGAGTTGGGACAATGGTTGCTAGCGATCTTTATGAAGGAGCACGGATGGCCAGG
GTGTCAGATGTTCCTGGAATAAAGCAGTTGTTACAACCGCTAGAAGAGTCTGGAACATTG
ATCAGAAGGACTGAGGAAGAGCTGGTGAAAGCACTGCACTCATTCATTATTGTGGAGAGA
GAGGGCCATATTATAGCATGTGCAGCTCTCTTTCCTTACTTTGAAGAAAAATGTGGGGAG
GTTGCTGCTATTGCTGTTTCTCCTGATTGTCGTGGCCAAGGACAGGGAGACAAGTTACTC
GATTATATTGAAAAGAAAGCATCTTCCCTTGGATTGCAAATGCTCTTCCTACTAACAACT
CGCACAGCTGATTGGTTTGTGAGGCGTGGGTTTTCCGAATGTTCCATTGATCATATACCA
GAGGAAAGAAGGAAAAAGATCAATCTTGCCCGTAGATCAAAGTATTACATGAAGAAGCTG
CTACCCGATAAAAGTGGTATACGTATCGATTGCACCTTTGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400037113
PEP Infomation

pacid=37428881 transcript=PGSC0003DMT400055176 locus=PGSC0003DMG400021414 ID=PGSC0003DMT400055176.v4.03 annot-version=v4.03
Sequence

MAALCGNSIWTPQARNCFQRGITSFNSLKFLPFQVNRCKRLWSRSLKCRVLGETDDVGFE
VSSAIKDDLFVGFFREAWPYFLAHRGSTFVVLISAEIVDSPHLDHLLMDISLLHGLGIKF
VLVPGTHVQIDRLLTERGSEAKYVGRYRITDPDSLEAAMDTSGRIRLMIEAKLSPGPSLT
GVRRHGDNSRWHDSVGVASGNFLSAKKRGVVEGIDYASTGEVKKVDVSRIRERLDQDSIV
LLSNLGYSSSGEVLNCNTYEVATACALALGAEKLICIIDGPILDESSRLIRFLTLQDADM
LVRRRAEQSETAANYVKAVSQEDFNRLGYHGSNGSLPSQNGDVYSQRYNPTFQNGIGFDN
GNGLWSSEQGFAIGGQEKLSRSNGYLSELAAAAFVCRGGVQRVHLLDGTIGGVLLKELFQ
RDGVGTMVASDLYEGARMARVSDVPGIKQLLQPLEESGTLIRRTEEELVKALHSFIIVER
EGHIIACAALFPYFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKKASSLGLQMLFLLTT
RTADWFVRRGFSECSIDHIPEERRKKINLARRSKYYMKKLLPDKSGIRIDCTFA*

Transcript Sequence

Transcript ID

PGSC0003DMT400055176
Transcript Infomation

pacid=37428881 locus=PGSC0003DMG400021414 ID=PGSC0003DMT400055176.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTTTGTGTGGCAATAGTATTTGGACTCCTCAAGCTCGAAATTGTTTTCAGCGG
GGAATAACTAGTTTTAATTCGTTAAAGTTTTTACCTTTTCAAGTTAATCGTTGTAAGAGA
TTGTGGAGTAGGTCATTGAAGTGCAGGGTTTTGGGGGAAACGGACGATGTGGGTTTTGAA
GTGAGTAGTGCCATAAAAGACGATCTATTTGTTGGGTTTTTCAGAGAAGCATGGCCTTAC
TTTCTTGCACATCGAGGAAGCACGTTTGTTGTTTTAATCTCAGCTGAAATTGTTGATAGC
CCTCATTTGGATCATCTTCTCATGGATATCTCCCTCCTTCATGGTCTGGGAATCAAATTT
GTTCTTGTACCAGGAACTCATGTTCAGATTGACCGGCTTCTGACTGAAAGGGGAAGTGAG
GCCAAGTATGTAGGCCGCTACAGAATTACAGACCCTGATTCACTCGAGGCAGCTATGGAT
ACATCTGGAAGAATTCGTCTCATGATAGAGGCGAAGTTGTCACCTGGCCCTTCATTGACT
GGTGTCCGCCGACATGGAGATAATAGTCGCTGGCATGATAGTGTTGGTGTTGCCAGTGGT
AATTTTCTATCAGCGAAGAAAAGAGGAGTTGTCGAAGGAATTGATTATGCTTCAACTGGT
GAAGTAAAGAAGGTAGATGTTTCTCGAATTCGCGAGAGGCTTGATCAGGATTCCATAGTG
CTATTGAGCAATCTTGGTTATTCCAGCTCTGGAGAAGTATTAAACTGCAACACATATGAG
GTTGCAACAGCTTGTGCCTTGGCTCTAGGAGCAGAAAAACTAATTTGTATCATAGACGGC
CCAATTCTTGATGAGTCTAGCCGTCTCATTCGTTTCTTAACTCTTCAAGATGCTGATATG
CTGGTCCGCAGACGAGCTGAGCAAAGTGAGACTGCTGCTAATTATGTAAAAGCTGTTAGT
CAGGAGGACTTCAATCGTTTAGGTTACCATGGTTCCAATGGATCGCTCCCTTCCCAAAAT
GGTGATGTTTATAGCCAAAGATACAATCCCACATTTCAGAATGGCATTGGTTTTGACAAT
GGAAATGGGCTTTGGTCTAGTGAACAAGGTTTTGCAATTGGAGGACAAGAGAAACTAAGC
CGATCAAATGGTTACCTCTCAGAATTAGCTGCTGCTGCTTTTGTTTGCCGAGGAGGTGTT
CAAAGAGTGCACCTGCTGGATGGCACTATTGGTGGAGTTTTACTAAAGGAATTGTTCCAA
AGAGATGGAGTTGGGACAATGGTTGCTAGCGATCTTTATGAAGGAGCACGGATGGCCAGG
GTGTCAGATGTTCCTGGAATAAAGCAGTTGTTACAACCGCTAGAAGAGTCTGGAACATTG
ATCAGAAGGACTGAGGAAGAGCTGGTGAAAGCACTGCACTCATTCATTATTGTGGAGAGA
GAGGGCCATATTATAGCATGTGCAGCTCTCTTTCCTTACTTTGAAGAAAAATGTGGGGAG
GTTGCTGCTATTGCTGTTTCTCCTGATTGTCGTGGCCAAGGACAGGGAGACAAGTTACTC
GATTATATTGAAAAGAAAGCATCTTCCCTTGGATTGCAAATGCTCTTCCTACTAACAACT
CGCACAGCTGATTGGTTTGTGAGGCGTGGGTTTTCCGAATGTTCCATTGATCATATACCA
GAGGAAAGAAGGAAAAAGATCAATCTTGCCCGTAGATCAAAGTATTACATGAAGAAGCTG
CTACCCGATAAAAGTGGTATACGTATCGATTGCACCTTTGCATAG