Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055162
CDS Infomation

pacid=37427490 polypeptide=PGSC0003DMP400037101 locus=PGSC0003DMG400021409 ID=PGSC0003DMT400055162.v4.03 annot-version=v4.03
Sequence

ATGGAGATTGCTGTTTACAAACCCTATGGTGATCATGAATTTCAATCACTCATTGAAAGA
ATTCACCCTCCCAGGGTGTGCATTGATAATGATACTTGCCGAAACTGTACTATTGTGAAG
GTTGATAGTGCGAACAAACATGGTATATTGCTGGAGATGGTCCAAGTTCTGACGGATCTG
GACCTACTGATTCTAAGATCATACATATGCTCTGATGGTGGCTGGTTAATGGATGTTTTC
CACGTAACTGACCAACTTGGGAACAAAATCACTGACGAAAGCCTCATCCACTACATCGAA
CAGGCTATTTGTGCAAGTAGAAGAGGGTCCAGGGAAGTCCAAACATGTGTTGGTAGAAAT
GTAAGGCCCAGGCATGTCACGATGGAGCACACAGCTATGGAGATGACAGCAACAGATAGA
CCAGGGTTAATGTCCGAGATATCTGCTGTTCTGGCTGAGTTAGGATGCCATGTCTCTGGT
GCCGTGGCATGGACACATAACAAGCGAGCAGCCTGCATTGTTTACATGGAAGATGATCTG
AAGCATGGGCCAATCATGGACCCCTATAGAGTGGCACAAATACAGGCCCAGCTGGAGAAT
GTTGTTGAGGCCCACCATTATGAAGGGGAGCGACGGACTGTGAGGTTGGCAGCCCCTGCA
GCTAGCCAGACCCATACCGAAAGACGGCTTCATCAGTTGATGGCAGCTGACAGAGACTAT
GAACAATGTTGTTCCTGTGGTTATGATTCAAGTGGAGATGATGTAGCTCACAGGCAGAAG
AAGGGATCTAATAGCACAGAAGTGAAGATAGAAAATTGCAAGGAGAAGGGTTACTCCATT
GTTACTGTGAGGAGTATGGACAGACCTAAATTGCTATTTGACACTATCTGCACCTTGACA
GACTTGCAATATGTCGTGTTCCACGCCTCCATCAGTTCTTTTGAATCCATTGCCATTCAG
GAATACTATGTGAGACACAAGAATGGATGGACTTTGGATTCAGAAAGTGAGAGACGGAGA
ATGATCCAAAATCTGATGGCTGCTACTGAGAGGAGAGTATCTCATGAATTGAGGCTGGAT
GTTACTACTCAAAACAGGGTAGGACTGTTAGCAGATGTCACAAGAGTGTTTCGGGAGAAC
GGATTATCCATAAGCAGGACTGAGGTTGGGGTACAGGGAGAGCAAGCAGTTGGCACATTC
TATGTAAAAGATACTTCAGGGCAAGCTGTGACTTCAGAAACCTTGGAGATAGTAAGACGA
GAAATTGGAGGTACTGTCCTGGTGGCAAATAAATCCTCAGAGAGGCCATCTTCTCAACCA
ACAAATTTGTCAAATACAAGCCCTAGCATAAGCACTAGCAGTAGCAATGGCAAGCAAGAC
AACAAGCCTGGTTTCTCATTAGGAAGCATGTTTTGGTCTCAGCTTGAGTGGCTTTCCAGC
AATTTCAGACCTATAAAATCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037101
PEP Infomation

pacid=37427490 transcript=PGSC0003DMT400055162 locus=PGSC0003DMG400021409 ID=PGSC0003DMT400055162.v4.03 annot-version=v4.03
Sequence

MEIAVYKPYGDHEFQSLIERIHPPRVCIDNDTCRNCTIVKVDSANKHGILLEMVQVLTDL
DLLILRSYICSDGGWLMDVFHVTDQLGNKITDESLIHYIEQAICASRRGSREVQTCVGRN
VRPRHVTMEHTAMEMTATDRPGLMSEISAVLAELGCHVSGAVAWTHNKRAACIVYMEDDL
KHGPIMDPYRVAQIQAQLENVVEAHHYEGERRTVRLAAPAASQTHTERRLHQLMAADRDY
EQCCSCGYDSSGDDVAHRQKKGSNSTEVKIENCKEKGYSIVTVRSMDRPKLLFDTICTLT
DLQYVVFHASISSFESIAIQEYYVRHKNGWTLDSESERRRMIQNLMAATERRVSHELRLD
VTTQNRVGLLADVTRVFRENGLSISRTEVGVQGEQAVGTFYVKDTSGQAVTSETLEIVRR
EIGGTVLVANKSSERPSSQPTNLSNTSPSISTSSSNGKQDNKPGFSLGSMFWSQLEWLSS
NFRPIKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400055162
Transcript Infomation

pacid=37427490 locus=PGSC0003DMG400021409 ID=PGSC0003DMT400055162.v4.03 annot-version=v4.03
Sequence

ATGGAGATTGCTGTTTACAAACCCTATGGTGATCATGAATTTCAATCACTCATTGAAAGA
ATTCACCCTCCCAGGGTGTGCATTGATAATGATACTTGCCGAAACTGTACTATTGTGAAG
GTTGATAGTGCGAACAAACATGGTATATTGCTGGAGATGGTCCAAGTTCTGACGGATCTG
GACCTACTGATTCTAAGATCATACATATGCTCTGATGGTGGCTGGTTAATGGATGTTTTC
CACGTAACTGACCAACTTGGGAACAAAATCACTGACGAAAGCCTCATCCACTACATCGAA
CAGGCTATTTGTGCAAGTAGAAGAGGGTCCAGGGAAGTCCAAACATGTGTTGGTAGAAAT
GTAAGGCCCAGGCATGTCACGATGGAGCACACAGCTATGGAGATGACAGCAACAGATAGA
CCAGGGTTAATGTCCGAGATATCTGCTGTTCTGGCTGAGTTAGGATGCCATGTCTCTGGT
GCCGTGGCATGGACACATAACAAGCGAGCAGCCTGCATTGTTTACATGGAAGATGATCTG
AAGCATGGGCCAATCATGGACCCCTATAGAGTGGCACAAATACAGGCCCAGCTGGAGAAT
GTTGTTGAGGCCCACCATTATGAAGGGGAGCGACGGACTGTGAGGTTGGCAGCCCCTGCA
GCTAGCCAGACCCATACCGAAAGACGGCTTCATCAGTTGATGGCAGCTGACAGAGACTAT
GAACAATGTTGTTCCTGTGGTTATGATTCAAGTGGAGATGATGTAGCTCACAGGCAGAAG
AAGGGATCTAATAGCACAGAAGTGAAGATAGAAAATTGCAAGGAGAAGGGTTACTCCATT
GTTACTGTGAGGAGTATGGACAGACCTAAATTGCTATTTGACACTATCTGCACCTTGACA
GACTTGCAATATGTCGTGTTCCACGCCTCCATCAGTTCTTTTGAATCCATTGCCATTCAG
GAATACTATGTGAGACACAAGAATGGATGGACTTTGGATTCAGAAAGTGAGAGACGGAGA
ATGATCCAAAATCTGATGGCTGCTACTGAGAGGAGAGTATCTCATGAATTGAGGCTGGAT
GTTACTACTCAAAACAGGGTAGGACTGTTAGCAGATGTCACAAGAGTGTTTCGGGAGAAC
GGATTATCCATAAGCAGGACTGAGGTTGGGGTACAGGGAGAGCAAGCAGTTGGCACATTC
TATGTAAAAGATACTTCAGGGCAAGCTGTGACTTCAGAAACCTTGGAGATAGTAAGACGA
GAAATTGGAGGTACTGTCCTGGTGGCAAATAAATCCTCAGAGAGGCCATCTTCTCAACCA
ACAAATTTGTCAAATACAAGCCCTAGCATAAGCACTAGCAGTAGCAATGGCAAGCAAGAC
AACAAGCCTGGTTTCTCATTAGGAAGCATGTTTTGGTCTCAGCTTGAGTGGCTTTCCAGC
AATTTCAGACCTATAAAATCCTAA