Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055123
CDS Infomation

pacid=37445165 polypeptide=PGSC0003DMP400037080 locus=PGSC0003DMG400021391 ID=PGSC0003DMT400055123.v4.03 annot-version=v4.03
Sequence

ATGGTGACCAAGAAACCAAAAGTTGTGATAATAGGTGCAGGAATGGCGGGTCTTACAGCA
GCTAACAAGCTGTACACAAGTGCAAGCTCTAAAGAATGTATAGAGCTTTGTGTTGTGGAG
GGTGGTAATAGGATTGGTGGAAGGATTATAACTTCAGAGTTTGTTGGGAGTAGAATTGAG
ATGGGTGCTACTTGGATCCATGGAATTGAGGGTAGCCCTGTTTACAAGATAGCTCAAGAG
ATTAACTCACTTCATTCAGAGAAGCCTTGGGAGTGTATGGATGAGTTCTTGGATGACCCA
TTGACAATAGCTGAAGGAGGTTATCACCTCAATTCTTCTCTTGTTGACCCCATATGTAAC
CTTTTCAAGAATCTGATGGAGTTTGCTCAAGGGAAACCTAATGTCCAATTTCCTCAAAGT
AACATAGGGAATCTTAGTATTGGTTCTTTCCTAAGGAAAGGGCTTGATGCTTACTGGGGT
TCAATAAAAGAAGAAGAGGAAACACTGGGGTTTGATAACTGGACAAGAAAATCACTGGAG
GAAGGTATTTTTGCAATGCTTGAGAACACACAAAGGACTTACACATCAGCTGGTGATTTG
GAGACTCTAGATTTTAATGCAGAAAGCGAGTATCGTATGTTTCCAGGGAAAGAGATAACC
ATTGCCAAAGGTTACTCGACTATAGTTGAATCTTTGGCATCTGTTCTGCCAGCTGGTATG
ATTCAATTAGGCCGAAAGGTCACAAAAATTGAATGGCAACCTGATGATGGTGAAAACTGT
GATGTTACTAAGCCAGTAAAGATACATTTTTGTGATGGATCAATCATGTATGCTGATCAT
GTGATTGTGACAGTTTCACTTGGTGTTCTAAAACAAGGGATTGGCGATAATACTGGTATG
TTTAGTCCTGTACTACCTAGATTTAAGACTGAAGCAATCTCAAGGCTTGGTTTTGGTGTT
GTTAACAAACTATTCTTGCAACTAAGTCCAAACAGGGATGAAGCTATGAAGTTTCCCAAC
TTGCAGATGGTGTTTCATCAGTCAGACTCAAAACTAAGGCATCCAAGAATCCCCTGGTGG
ATGAGGAGGACAGCTTCTTTATGTCCTATCTATGGAACTTCAAATGTTCTATTGTCATGG
TTTGCAGGGAAAGAGGCTCTTGAGCTTGAATCACTTAGTGATGAAGAGATCATTGATGGA
TTCTCAACAATGATCTCCAATTTACTCGAAAACTCAAAAAACAATACCCATGACTTGTGC
AATGGGCATGCAAACTCAGCCATCAAATTTGACAAGGTTTTAAAGACTCAATGGGGTACT
GATCCACTCTTCTTGGGATCATATAGTTATGTGGCAGTTGGTTCAAGTGGAGATGATCTG
GATAGTATGGCTGAGCCATTGCCAAAAAGGAGCAATCATAGTTTTAATTCCCCTCCACTT
CAAATTCTATTTGCAGGGGAAGCAACACATAGAACTCATTATTCAACAACTCATGGTGCT
TACTTTAGTGGCCTAAGAGAAGCCAACAGGCTCCTTCAGCACTACCACTATATTGATATA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400037080
PEP Infomation

pacid=37445165 transcript=PGSC0003DMT400055123 locus=PGSC0003DMG400021391 ID=PGSC0003DMT400055123.v4.03 annot-version=v4.03
Sequence

MVTKKPKVVIIGAGMAGLTAANKLYTSASSKECIELCVVEGGNRIGGRIITSEFVGSRIE
MGATWIHGIEGSPVYKIAQEINSLHSEKPWECMDEFLDDPLTIAEGGYHLNSSLVDPICN
LFKNLMEFAQGKPNVQFPQSNIGNLSIGSFLRKGLDAYWGSIKEEEETLGFDNWTRKSLE
EGIFAMLENTQRTYTSAGDLETLDFNAESEYRMFPGKEITIAKGYSTIVESLASVLPAGM
IQLGRKVTKIEWQPDDGENCDVTKPVKIHFCDGSIMYADHVIVTVSLGVLKQGIGDNTGM
FSPVLPRFKTEAISRLGFGVVNKLFLQLSPNRDEAMKFPNLQMVFHQSDSKLRHPRIPWW
MRRTASLCPIYGTSNVLLSWFAGKEALELESLSDEEIIDGFSTMISNLLENSKNNTHDLC
NGHANSAIKFDKVLKTQWGTDPLFLGSYSYVAVGSSGDDLDSMAEPLPKRSNHSFNSPPL
QILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHYIDI*

Transcript Sequence

Transcript ID

PGSC0003DMT400055123
Transcript Infomation

pacid=37445165 locus=PGSC0003DMG400021391 ID=PGSC0003DMT400055123.v4.03 annot-version=v4.03
Sequence

ATGGTGACCAAGAAACCAAAAGTTGTGATAATAGGTGCAGGAATGGCGGGTCTTACAGCA
GCTAACAAGCTGTACACAAGTGCAAGCTCTAAAGAATGTATAGAGCTTTGTGTTGTGGAG
GGTGGTAATAGGATTGGTGGAAGGATTATAACTTCAGAGTTTGTTGGGAGTAGAATTGAG
ATGGGTGCTACTTGGATCCATGGAATTGAGGGTAGCCCTGTTTACAAGATAGCTCAAGAG
ATTAACTCACTTCATTCAGAGAAGCCTTGGGAGTGTATGGATGAGTTCTTGGATGACCCA
TTGACAATAGCTGAAGGAGGTTATCACCTCAATTCTTCTCTTGTTGACCCCATATGTAAC
CTTTTCAAGAATCTGATGGAGTTTGCTCAAGGGAAACCTAATGTCCAATTTCCTCAAAGT
AACATAGGGAATCTTAGTATTGGTTCTTTCCTAAGGAAAGGGCTTGATGCTTACTGGGGT
TCAATAAAAGAAGAAGAGGAAACACTGGGGTTTGATAACTGGACAAGAAAATCACTGGAG
GAAGGTATTTTTGCAATGCTTGAGAACACACAAAGGACTTACACATCAGCTGGTGATTTG
GAGACTCTAGATTTTAATGCAGAAAGCGAGTATCGTATGTTTCCAGGGAAAGAGATAACC
ATTGCCAAAGGTTACTCGACTATAGTTGAATCTTTGGCATCTGTTCTGCCAGCTGGTATG
ATTCAATTAGGCCGAAAGGTCACAAAAATTGAATGGCAACCTGATGATGGTGAAAACTGT
GATGTTACTAAGCCAGTAAAGATACATTTTTGTGATGGATCAATCATGTATGCTGATCAT
GTGATTGTGACAGTTTCACTTGGTGTTCTAAAACAAGGGATTGGCGATAATACTGGTATG
TTTAGTCCTGTACTACCTAGATTTAAGACTGAAGCAATCTCAAGGCTTGGTTTTGGTGTT
GTTAACAAACTATTCTTGCAACTAAGTCCAAACAGGGATGAAGCTATGAAGTTTCCCAAC
TTGCAGATGGTGTTTCATCAGTCAGACTCAAAACTAAGGCATCCAAGAATCCCCTGGTGG
ATGAGGAGGACAGCTTCTTTATGTCCTATCTATGGAACTTCAAATGTTCTATTGTCATGG
TTTGCAGGGAAAGAGGCTCTTGAGCTTGAATCACTTAGTGATGAAGAGATCATTGATGGA
TTCTCAACAATGATCTCCAATTTACTCGAAAACTCAAAAAACAATACCCATGACTTGTGC
AATGGGCATGCAAACTCAGCCATCAAATTTGACAAGGTTTTAAAGACTCAATGGGGTACT
GATCCACTCTTCTTGGGATCATATAGTTATGTGGCAGTTGGTTCAAGTGGAGATGATCTG
GATAGTATGGCTGAGCCATTGCCAAAAAGGAGCAATCATAGTTTTAATTCCCCTCCACTT
CAAATTCTATTTGCAGGGGAAGCAACACATAGAACTCATTATTCAACAACTCATGGTGCT
TACTTTAGTGGCCTAAGAGAAGCCAACAGGCTCCTTCAGCACTACCACTATATTGATATA
TGA