Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055103
CDS Infomation

pacid=37437277 polypeptide=PGSC0003DMP400037069 locus=PGSC0003DMG400021381 ID=PGSC0003DMT400055103.v4.03 annot-version=v4.03
Sequence

ATGGCTGTGATGGATGAGATTGAAATTGATGTCAGCTCGGACATTGAAATTGATGACATA
AAGTGCGATAACATAGCCGAAAAGGATGTCAGCGATGAAGAAATTGAGCCAAACGAATTG
GAGAGACGGATGTGGAAGGACCGTGTCAAGCTCAAGCGGCTCAAGGAAAAACAGAAGCTT
GCAGCCCAGCTAGCTGCAGAGAAGCAGGACAATAAACAAGTTACTGATCAGGCTACGCGG
AAAAAGATGTCAAGAGCTCAAGATGGGATTTTGAAGTACATGTTGAAGCTCATGGAGGTG
TGCAATGCTCGAGGATTTGTTTATGGAATCATTCCTGATAAGGGTAAACCTGTGAGCGGT
TCGTCAGATAACATAAGAGCTTGGTGGAAGGAGAAGGTGAAGTTTGATAAGAATGGTCTT
GCTGCAATAGCCAAGTACGAAGCAGAATGTCTAGCAAGAGGAGACGGTGTAGGCAGCCCA
AATGGGAACCCACAAAGTGTCTTGGAAGACTTGCAAGATGCTACCTTGGGGTCCCTTTTG
TCTTCTTTAATGCAACACTGTGATCCGCCTCAACGGAAATACCCACTGGAGAAAGGTATC
TCGCCACCGTGGTGGCCAACTGGGGATGAGGGATGGTGGGCTAAAATGGGACTACCTAAG
GGTCAGAAACCGCCATACAGAAAGCCGCATGATTTGAAGAAGATGTGGAAAGTTGGTGTT
CTAACTGCTGTCATAAAGCATATGTCACCTGATATTGCAAAGATCAGGAAATTAATCCGC
AAATCGAAGAGTCTGCAGGACAAGATGACTGCTAAGGAGAGCTCAATTTGGCTGGCTGTT
TTAAGCAGAGAGGAAGCAACCCTCCAACAAGCAGGCAGTGAGAATGGATCATCTAGCATA
GAGGAACCAGCTGGAAGCCGTGGTGAAAAGAAGAAATCTTTAATTAGCAGTGACAGCGAC
TATGATGTTGATGGCACTGATGATGGTATTGGCTCTGTATCGTCTAGGAATGAGAGGAGA
AATCATTTTCATCCTCTAAATGCCATTCGTCAATCTCACCAAAGTACGGAGAAAGGAGAT
GGACACCATCGAAGGAGAAAACGTGCTAGGTCAAACCTTACTGAGAAACAGATTCAACCA
TCTCTGCTACATGGTGACGAGCATAGTAACACATTACCTGATATAAACAGTTCAGAAATG
CTATTGGCTGGACGTATAACGAGTGACAGCCTACAGGGAAATGACAAGAGCGAAGCAACA
AAGCCTGTAGAGAACGACACAGAGAGTCAATCAGAGTTACGATTACAAGACTCGAACCTA
TCATTCGTTCCATCAGCTAATGTAGTCTCTACAGAGGATACATATATAGGTGCTGGGCCA
TCACTTTATCCGATGTCTCTAAATTCTGCAGTTGTCCCTTATGAATCAGAGATGCATCTT
GAAAATCAAGGCTCTATAGTTCAGCATCAATTTCAAGACGCTCAGTTCCATGGTCTCCAG
AAGATTTCTGGGATGAATGATGGACCACAAATTTCCCTATCGCATTATGGACCTCCAAAC
AATGGGTTGCAATATGGACCTCACAGTTCCATTGTACACACTGAACTGCAAGTTTCTGAA
TTTGCTCATGGGTCTCAATTTTCTAACTTCAGTCAACCACCTGTATATCACTCTTATTCT
TCAGCTGAATTTGGGTCGACACATGCGGAACCACAGTCCCACTTGGCATGCAATGAACTT
CAGATTAGGCCAAGGGATTCTGGTGTTGGTCTGTCGCTTCACGGAAGTGGAAATTCTAAA
GTCAATCACCATGATGGAAAAGACGTGTTCGGGAATAATCATGACAGACATATTGATATG
CCTTTTGCATCTCCACTTACTATTGGCTCGTCATATGCTACACTTGGCAGCCCATTTGAC
TTGGGGATTGATGTCCAAAGTCATTTTGATAATTCTGATTATGATTTAGATTTTGACAAA
GAACTGATGTCATTCTTTGCCTCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400037069
PEP Infomation

pacid=37437277 transcript=PGSC0003DMT400055103 locus=PGSC0003DMG400021381 ID=PGSC0003DMT400055103.v4.03 annot-version=v4.03
Sequence

MAVMDEIEIDVSSDIEIDDIKCDNIAEKDVSDEEIEPNELERRMWKDRVKLKRLKEKQKL
AAQLAAEKQDNKQVTDQATRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPDKGKPVSG
SSDNIRAWWKEKVKFDKNGLAAIAKYEAECLARGDGVGSPNGNPQSVLEDLQDATLGSLL
SSLMQHCDPPQRKYPLEKGISPPWWPTGDEGWWAKMGLPKGQKPPYRKPHDLKKMWKVGV
LTAVIKHMSPDIAKIRKLIRKSKSLQDKMTAKESSIWLAVLSREEATLQQAGSENGSSSI
EEPAGSRGEKKKSLISSDSDYDVDGTDDGIGSVSSRNERRNHFHPLNAIRQSHQSTEKGD
GHHRRRKRARSNLTEKQIQPSLLHGDEHSNTLPDINSSEMLLAGRITSDSLQGNDKSEAT
KPVENDTESQSELRLQDSNLSFVPSANVVSTEDTYIGAGPSLYPMSLNSAVVPYESEMHL
ENQGSIVQHQFQDAQFHGLQKISGMNDGPQISLSHYGPPNNGLQYGPHSSIVHTELQVSE
FAHGSQFSNFSQPPVYHSYSSAEFGSTHAEPQSHLACNELQIRPRDSGVGLSLHGSGNSK
VNHHDGKDVFGNNHDRHIDMPFASPLTIGSSYATLGSPFDLGIDVQSHFDNSDYDLDFDK
ELMSFFAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400055103
Transcript Infomation

pacid=37437277 locus=PGSC0003DMG400021381 ID=PGSC0003DMT400055103.v4.03 annot-version=v4.03
Sequence

ATGGCTGTGATGGATGAGATTGAAATTGATGTCAGCTCGGACATTGAAATTGATGACATA
AAGTGCGATAACATAGCCGAAAAGGATGTCAGCGATGAAGAAATTGAGCCAAACGAATTG
GAGAGACGGATGTGGAAGGACCGTGTCAAGCTCAAGCGGCTCAAGGAAAAACAGAAGCTT
GCAGCCCAGCTAGCTGCAGAGAAGCAGGACAATAAACAAGTTACTGATCAGGCTACGCGG
AAAAAGATGTCAAGAGCTCAAGATGGGATTTTGAAGTACATGTTGAAGCTCATGGAGGTG
TGCAATGCTCGAGGATTTGTTTATGGAATCATTCCTGATAAGGGTAAACCTGTGAGCGGT
TCGTCAGATAACATAAGAGCTTGGTGGAAGGAGAAGGTGAAGTTTGATAAGAATGGTCTT
GCTGCAATAGCCAAGTACGAAGCAGAATGTCTAGCAAGAGGAGACGGTGTAGGCAGCCCA
AATGGGAACCCACAAAGTGTCTTGGAAGACTTGCAAGATGCTACCTTGGGGTCCCTTTTG
TCTTCTTTAATGCAACACTGTGATCCGCCTCAACGGAAATACCCACTGGAGAAAGGTATC
TCGCCACCGTGGTGGCCAACTGGGGATGAGGGATGGTGGGCTAAAATGGGACTACCTAAG
GGTCAGAAACCGCCATACAGAAAGCCGCATGATTTGAAGAAGATGTGGAAAGTTGGTGTT
CTAACTGCTGTCATAAAGCATATGTCACCTGATATTGCAAAGATCAGGAAATTAATCCGC
AAATCGAAGAGTCTGCAGGACAAGATGACTGCTAAGGAGAGCTCAATTTGGCTGGCTGTT
TTAAGCAGAGAGGAAGCAACCCTCCAACAAGCAGGCAGTGAGAATGGATCATCTAGCATA
GAGGAACCAGCTGGAAGCCGTGGTGAAAAGAAGAAATCTTTAATTAGCAGTGACAGCGAC
TATGATGTTGATGGCACTGATGATGGTATTGGCTCTGTATCGTCTAGGAATGAGAGGAGA
AATCATTTTCATCCTCTAAATGCCATTCGTCAATCTCACCAAAGTACGGAGAAAGGAGAT
GGACACCATCGAAGGAGAAAACGTGCTAGGTCAAACCTTACTGAGAAACAGATTCAACCA
TCTCTGCTACATGGTGACGAGCATAGTAACACATTACCTGATATAAACAGTTCAGAAATG
CTATTGGCTGGACGTATAACGAGTGACAGCCTACAGGGAAATGACAAGAGCGAAGCAACA
AAGCCTGTAGAGAACGACACAGAGAGTCAATCAGAGTTACGATTACAAGACTCGAACCTA
TCATTCGTTCCATCAGCTAATGTAGTCTCTACAGAGGATACATATATAGGTGCTGGGCCA
TCACTTTATCCGATGTCTCTAAATTCTGCAGTTGTCCCTTATGAATCAGAGATGCATCTT
GAAAATCAAGGCTCTATAGTTCAGCATCAATTTCAAGACGCTCAGTTCCATGGTCTCCAG
AAGATTTCTGGGATGAATGATGGACCACAAATTTCCCTATCGCATTATGGACCTCCAAAC
AATGGGTTGCAATATGGACCTCACAGTTCCATTGTACACACTGAACTGCAAGTTTCTGAA
TTTGCTCATGGGTCTCAATTTTCTAACTTCAGTCAACCACCTGTATATCACTCTTATTCT
TCAGCTGAATTTGGGTCGACACATGCGGAACCACAGTCCCACTTGGCATGCAATGAACTT
CAGATTAGGCCAAGGGATTCTGGTGTTGGTCTGTCGCTTCACGGAAGTGGAAATTCTAAA
GTCAATCACCATGATGGAAAAGACGTGTTCGGGAATAATCATGACAGACATATTGATATG
CCTTTTGCATCTCCACTTACTATTGGCTCGTCATATGCTACACTTGGCAGCCCATTTGAC
TTGGGGATTGATGTCCAAAGTCATTTTGATAATTCTGATTATGATTTAGATTTTGACAAA
GAACTGATGTCATTCTTTGCCTCATAG