Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055092
CDS Infomation

pacid=37437447 polypeptide=PGSC0003DMP400037060 locus=PGSC0003DMG400021378 ID=PGSC0003DMT400055092.v4.03 annot-version=v4.03
Sequence

ATGAATGAAGATTTCCTGTTGATCGTGTTGAAGGATCTTCTTCCACGACGCCCAGATTTG
AGATTGATTTTGATGAGTGCTACTCTTAATGCTGAATTATTTTCCAGTTACTTTGGAGGA
GCGCCTATGATTCACATCCCAGGCTTCACATATCCTGTAAGAGAAAATTTTCTGGAAGAT
GTGCTGGAAATTACGGGATATAAGTTGACTTCATTCAACCAAATTGATGATTATGGCCAG
GAGAAGATGTGGAAAACACAAAAACAGTTAGCACCCCGCAAAAAGAAAAATCAGATAACT
GCTCTTGTTGAGGATGCTGTAGAAAAATCAAACTTCGAGAATTATAGTCCAAGGGCACGT
GATTCACTAGCATGCTGGGCTCCTGATTGTATTGGATTCAATCTTATTGAGGCAGTTTTG
TGCCATATATGTCGGAAAGAACGTCCAGGCGCTGTACTAGTATTTATGACTGGTTGGGAA
GATATTAGTTGTTTAAGAGATAAACTTAAAGCACATCCTCTCTTGGGTGACCCAAATAGA
GTGTTGGTGCTCACTTGTCATGGTTCTATGGCTACCTCTGAGCAGAAACTCATATTTGAA
AAGCCACCTCAGAATGTACGTAAAATAGTACTTGCAACAAATATGGCCGAGGCAAGTATT
ACTATAAATGATGTGGTCTTTGTGGTGGACTGTGGAAAAGCGAAGGAGACGACTTATGAT
GCTCTAAATAATACTCCGTGCTTATTACCTTCATGGATTTCACAAGCTTCTGCACGACAA
AGAAGGGGTAGGGCTGGCCGTGTCCAACCAGGCGAGTGCTACCACTTGTATCCACGATGT
GTGTATGAAGCTTTTGCTGAATACCAACTACCTGAACTCCTGAGAACTCCTTTGAATTCT
CTTTGCTTGCAAATAAAGAGTTTGCAGGTTGGAAGTATTGCTGAATTCCTTTCGTCTGCG
CTTCAGCCTCCAGAATCATTGGCTGTGCAAAATGCTATTCAGTTTTTGAAGATGATTGGT
GCATTAGATGAAAATGAGAATCTTACACATCTAGGCAAATTTTTAGCAATTCTCCCTGTG
GATCCCAAGCTTGGGAAAATGCTCATTATGGGTACTATTTTCCGTTGCTTTGATCCTGTT
TTGACTATTGTGGCTGGTCTTAGTGTACGGGATCCATTTCTGTTGCCTCAAGATAAAAAA
GATTTAGCGGGGACAGCAAAGTCCAGATTCTCAGCCAAGGACTATAGTGACCATATGGCA
CTTGTCCGTGCATATGAAGGATGGAAAGATGCTGAAAGGGAAGGTTCTGCCTACGAATAT
TGCTGGAGGAATTTCCTCTCTGCCCAGACTCTTCAAGCTATCCATTCTCTTAGAAAGCAA
TTTATCTTCATCTTGAAAGATGCTGGGTTGCTTGATGCTGATACTGCAATTAACAATAAG
CTAAGTTACAATCAGTCTTTGGTTCGTGCTGTCATATGTTCTGGATTGTATCCTGGAATT
TCATCAGTGGTGAACAGAGAGACATCAATGTCCTTCAAGACTATGGATGATGGACAAGTC
TTTCTTTATGCAAATTCAGTCAATGCTCGCTATCAAACGATTCCATACCCTTGGCTGGTG
TTCGGTGAAAAAGTTAAGGTCAATACAGTCTTCATACGGGATTCTACTGGAGTATCTGAT
TCGATTGTGATCCTATTTGGTAGTGCTCTAGACTGTGGAGATATGGCTGGGCATTTAAAG
ATGTTGGGTGGATACATAGAGTTCTTCATGGATCCTACTCTGGCGGATTGCTACATAAAG
CTCAAAGAGGAGCTCGATATACTTTTGCAAAAGAAGCTTCAAGATCCTGAGGTAGACATC
CACAAGGAAGGCAAATACCTTATGCTTGCTGTTCAGGAACTGGTTTCAGGAGATCAGTCT
GAGGGCAGGTTTGTGTTTGGTCGTGAAAACAAGAAGCCTAAAGATTCTGACACTGATAGA
TTTACAAGGGACGGGACAAACCCAAAGAGTTTGTTGCAAACCCTACTTATGAGGGCCAGT
CACTCCCCTCCCAAGTACAAAACAAAGCATCTAAAAACAAATGAATTTAGGGCACTTGCA
GAGTTCAAGGGAATGCAATTTGTAGGTAAACCAAAGAGAAACAAAGCCCTTGCAGAAAAG
GATGCTGCAATAGAGGCACTAGCATGGTTAACTCAAACATCTGAAAAGAATCATGATGAA
GATGATAAATCTCCTCCTGATGTCACCGATAACATGCTGAAACTTCTTGGTAAACGCAGG
AGATCAAAGCGTCGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400037060
PEP Infomation

pacid=37437447 transcript=PGSC0003DMT400055092 locus=PGSC0003DMG400021378 ID=PGSC0003DMT400055092.v4.03 annot-version=v4.03
Sequence

MNEDFLLIVLKDLLPRRPDLRLILMSATLNAELFSSYFGGAPMIHIPGFTYPVRENFLED
VLEITGYKLTSFNQIDDYGQEKMWKTQKQLAPRKKKNQITALVEDAVEKSNFENYSPRAR
DSLACWAPDCIGFNLIEAVLCHICRKERPGAVLVFMTGWEDISCLRDKLKAHPLLGDPNR
VLVLTCHGSMATSEQKLIFEKPPQNVRKIVLATNMAEASITINDVVFVVDCGKAKETTYD
ALNNTPCLLPSWISQASARQRRGRAGRVQPGECYHLYPRCVYEAFAEYQLPELLRTPLNS
LCLQIKSLQVGSIAEFLSSALQPPESLAVQNAIQFLKMIGALDENENLTHLGKFLAILPV
DPKLGKMLIMGTIFRCFDPVLTIVAGLSVRDPFLLPQDKKDLAGTAKSRFSAKDYSDHMA
LVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHSLRKQFIFILKDAGLLDADTAINNK
LSYNQSLVRAVICSGLYPGISSVVNRETSMSFKTMDDGQVFLYANSVNARYQTIPYPWLV
FGEKVKVNTVFIRDSTGVSDSIVILFGSALDCGDMAGHLKMLGGYIEFFMDPTLADCYIK
LKEELDILLQKKLQDPEVDIHKEGKYLMLAVQELVSGDQSEGRFVFGRENKKPKDSDTDR
FTRDGTNPKSLLQTLLMRASHSPPKYKTKHLKTNEFRALAEFKGMQFVGKPKRNKALAEK
DAAIEALAWLTQTSEKNHDEDDKSPPDVTDNMLKLLGKRRRSKRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400055092
Transcript Infomation

pacid=37437447 locus=PGSC0003DMG400021378 ID=PGSC0003DMT400055092.v4.03 annot-version=v4.03
Sequence

ATGAATGAAGATTTCCTGTTGATCGTGTTGAAGGATCTTCTTCCACGACGCCCAGATTTG
AGATTGATTTTGATGAGTGCTACTCTTAATGCTGAATTATTTTCCAGTTACTTTGGAGGA
GCGCCTATGATTCACATCCCAGGCTTCACATATCCTGTAAGAGAAAATTTTCTGGAAGAT
GTGCTGGAAATTACGGGATATAAGTTGACTTCATTCAACCAAATTGATGATTATGGCCAG
GAGAAGATGTGGAAAACACAAAAACAGTTAGCACCCCGCAAAAAGAAAAATCAGATAACT
GCTCTTGTTGAGGATGCTGTAGAAAAATCAAACTTCGAGAATTATAGTCCAAGGGCACGT
GATTCACTAGCATGCTGGGCTCCTGATTGTATTGGATTCAATCTTATTGAGGCAGTTTTG
TGCCATATATGTCGGAAAGAACGTCCAGGCGCTGTACTAGTATTTATGACTGGTTGGGAA
GATATTAGTTGTTTAAGAGATAAACTTAAAGCACATCCTCTCTTGGGTGACCCAAATAGA
GTGTTGGTGCTCACTTGTCATGGTTCTATGGCTACCTCTGAGCAGAAACTCATATTTGAA
AAGCCACCTCAGAATGTACGTAAAATAGTACTTGCAACAAATATGGCCGAGGCAAGTATT
ACTATAAATGATGTGGTCTTTGTGGTGGACTGTGGAAAAGCGAAGGAGACGACTTATGAT
GCTCTAAATAATACTCCGTGCTTATTACCTTCATGGATTTCACAAGCTTCTGCACGACAA
AGAAGGGGTAGGGCTGGCCGTGTCCAACCAGGCGAGTGCTACCACTTGTATCCACGATGT
GTGTATGAAGCTTTTGCTGAATACCAACTACCTGAACTCCTGAGAACTCCTTTGAATTCT
CTTTGCTTGCAAATAAAGAGTTTGCAGGTTGGAAGTATTGCTGAATTCCTTTCGTCTGCG
CTTCAGCCTCCAGAATCATTGGCTGTGCAAAATGCTATTCAGTTTTTGAAGATGATTGGT
GCATTAGATGAAAATGAGAATCTTACACATCTAGGCAAATTTTTAGCAATTCTCCCTGTG
GATCCCAAGCTTGGGAAAATGCTCATTATGGGTACTATTTTCCGTTGCTTTGATCCTGTT
TTGACTATTGTGGCTGGTCTTAGTGTACGGGATCCATTTCTGTTGCCTCAAGATAAAAAA
GATTTAGCGGGGACAGCAAAGTCCAGATTCTCAGCCAAGGACTATAGTGACCATATGGCA
CTTGTCCGTGCATATGAAGGATGGAAAGATGCTGAAAGGGAAGGTTCTGCCTACGAATAT
TGCTGGAGGAATTTCCTCTCTGCCCAGACTCTTCAAGCTATCCATTCTCTTAGAAAGCAA
TTTATCTTCATCTTGAAAGATGCTGGGTTGCTTGATGCTGATACTGCAATTAACAATAAG
CTAAGTTACAATCAGTCTTTGGTTCGTGCTGTCATATGTTCTGGATTGTATCCTGGAATT
TCATCAGTGGTGAACAGAGAGACATCAATGTCCTTCAAGACTATGGATGATGGACAAGTC
TTTCTTTATGCAAATTCAGTCAATGCTCGCTATCAAACGATTCCATACCCTTGGCTGGTG
TTCGGTGAAAAAGTTAAGGTCAATACAGTCTTCATACGGGATTCTACTGGAGTATCTGAT
TCGATTGTGATCCTATTTGGTAGTGCTCTAGACTGTGGAGATATGGCTGGGCATTTAAAG
ATGTTGGGTGGATACATAGAGTTCTTCATGGATCCTACTCTGGCGGATTGCTACATAAAG
CTCAAAGAGGAGCTCGATATACTTTTGCAAAAGAAGCTTCAAGATCCTGAGGTAGACATC
CACAAGGAAGGCAAATACCTTATGCTTGCTGTTCAGGAACTGGTTTCAGGAGATCAGTCT
GAGGGCAGGTTTGTGTTTGGTCGTGAAAACAAGAAGCCTAAAGATTCTGACACTGATAGA
TTTACAAGGGACGGGACAAACCCAAAGAGTTTGTTGCAAACCCTACTTATGAGGGCCAGT
CACTCCCCTCCCAAGTACAAAACAAAGCATCTAAAAACAAATGAATTTAGGGCACTTGCA
GAGTTCAAGGGAATGCAATTTGTAGGTAAACCAAAGAGAAACAAAGCCCTTGCAGAAAAG
GATGCTGCAATAGAGGCACTAGCATGGTTAACTCAAACATCTGAAAAGAATCATGATGAA
GATGATAAATCTCCTCCTGATGTCACCGATAACATGCTGAAACTTCTTGGTAAACGCAGG
AGATCAAAGCGTCGCTGA