Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055082
CDS Infomation

pacid=37441432 polypeptide=PGSC0003DMP400037050 locus=PGSC0003DMG400021374 ID=PGSC0003DMT400055082.v4.03 annot-version=v4.03
Sequence

ATGGCAAAAGAAGAGCCAAACTCTGCTTCCGTTGTTGTAGAAGGAACATCTGAGGTTCGC
GATGATAATGAAACGGCCAACGGGTCTGCTTCCTCACTGCAAAAGGAGGTTGAGGAGAAA
GTTGATGGTTTGACAGTGGATGAGCCGACGACAGGTACTAGATCCATTTGGTTGCCTCTA
ATACCTGTGCCTTCTATTTGTGATTTTACAGAAGCTGCAAAGAAGAAGAAGAAGAAAAAT
AAGAGCAAGAAAAAAAAGGAGCCACCTCAGCAAACTGATCCACCTTCTATTCCCGTAGCT
GAGCTTTATCCTTCTGGTGAATTTCCAGAGGGTGAAATTCAACAATACAAAGATGATAAC
TTGTGGAGGACTACATCTGAGGAAAAGAGGGAATTGGAGCGCCTGGAAAAGCCAACTTAT
AATTCTGTCCGTCAAGCAGCAGAAGTTCATCGTCAGGTTCGGAAATACATCAGGCAAATT
GCTAAGCCTGGCATGTTAATGATTGACCTGTGTGAGACTTTGGAGAATATGGTTCGCAAA
TTGATATCAGAGAATGGTCTTCAAGCTGGCATTGCATTCCCTACAGGGTGCTCATTGAAC
TGGGTCGCAGCTCATTGGACCCCCAATTCAGGAGATAAAACTGTGCTTCAGTATGATGAT
GTGATGAAGTTGGACTTTGGAACCCATATTGATGGACGTATTGTGGATTGTGCATTTACT
GTGGCTTTCAATCCTATGTTTGATCCACTACTTGAGGCTTCACGAGAAGCCACTAATACT
GGCATTAAGGAAGCGGGAATTGACGTACGCCTTTGTGATGTCGGTGCTGCAATTCAAGAG
GTTATGGAATCCTATGAGGTTGAAATCAACGGAAAGGTATTCCAAGTTAAGAGCATCCGA
AATCTGAATGGGCACAGTATAGGCCAGTATCAAATCCACGCAGGAAAATCTGTTCCGATT
GTTAAAGGAGGAGAACAAACCAAAATGGAAGAGGGTGAATTTTATGCAATTGAGACGTTT
GGATCAACAGGGAAGGGATACGTGAGGGAAGATCTAGAATGCAGCCATTATATGAAAAAC
TTTGATATTGGACACATTCCACTGCGGCTGCCTAGAGCCAAGCAACTGCTGGCAACAATA
AATAAGAACTTCTCCACATTGGCATTCTGTAGACGTTATCTAGACCGCGTCGGTGAGACA
AAATATCTGATGGCATTGAAGAACTTATGTGATGCTGGAATTGTTCAGCCATATCCCCCA
CTTTGCGATAACAAAGGTAGCTACGTATCTCAGTTTGAGCACACCATTTTACTTCGTCCG
ACTTGCAAAGAGGTCGTATCAAGAGGCGATGACTACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037050
PEP Infomation

pacid=37441432 transcript=PGSC0003DMT400055082 locus=PGSC0003DMG400021374 ID=PGSC0003DMT400055082.v4.03 annot-version=v4.03
Sequence

MAKEEPNSASVVVEGTSEVRDDNETANGSASSLQKEVEEKVDGLTVDEPTTGTRSIWLPL
IPVPSICDFTEAAKKKKKKNKSKKKKEPPQQTDPPSIPVAELYPSGEFPEGEIQQYKDDN
LWRTTSEEKRELERLEKPTYNSVRQAAEVHRQVRKYIRQIAKPGMLMIDLCETLENMVRK
LISENGLQAGIAFPTGCSLNWVAAHWTPNSGDKTVLQYDDVMKLDFGTHIDGRIVDCAFT
VAFNPMFDPLLEASREATNTGIKEAGIDVRLCDVGAAIQEVMESYEVEINGKVFQVKSIR
NLNGHSIGQYQIHAGKSVPIVKGGEQTKMEEGEFYAIETFGSTGKGYVREDLECSHYMKN
FDIGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRVGETKYLMALKNLCDAGIVQPYPP
LCDNKGSYVSQFEHTILLRPTCKEVVSRGDDY*

Transcript Sequence

Transcript ID

PGSC0003DMT400055082
Transcript Infomation

pacid=37441432 locus=PGSC0003DMG400021374 ID=PGSC0003DMT400055082.v4.03 annot-version=v4.03
Sequence

ATGGCAAAAGAAGAGCCAAACTCTGCTTCCGTTGTTGTAGAAGGAACATCTGAGGTTCGC
GATGATAATGAAACGGCCAACGGGTCTGCTTCCTCACTGCAAAAGGAGGTTGAGGAGAAA
GTTGATGGTTTGACAGTGGATGAGCCGACGACAGGTACTAGATCCATTTGGTTGCCTCTA
ATACCTGTGCCTTCTATTTGTGATTTTACAGAAGCTGCAAAGAAGAAGAAGAAGAAAAAT
AAGAGCAAGAAAAAAAAGGAGCCACCTCAGCAAACTGATCCACCTTCTATTCCCGTAGCT
GAGCTTTATCCTTCTGGTGAATTTCCAGAGGGTGAAATTCAACAATACAAAGATGATAAC
TTGTGGAGGACTACATCTGAGGAAAAGAGGGAATTGGAGCGCCTGGAAAAGCCAACTTAT
AATTCTGTCCGTCAAGCAGCAGAAGTTCATCGTCAGGTTCGGAAATACATCAGGCAAATT
GCTAAGCCTGGCATGTTAATGATTGACCTGTGTGAGACTTTGGAGAATATGGTTCGCAAA
TTGATATCAGAGAATGGTCTTCAAGCTGGCATTGCATTCCCTACAGGGTGCTCATTGAAC
TGGGTCGCAGCTCATTGGACCCCCAATTCAGGAGATAAAACTGTGCTTCAGTATGATGAT
GTGATGAAGTTGGACTTTGGAACCCATATTGATGGACGTATTGTGGATTGTGCATTTACT
GTGGCTTTCAATCCTATGTTTGATCCACTACTTGAGGCTTCACGAGAAGCCACTAATACT
GGCATTAAGGAAGCGGGAATTGACGTACGCCTTTGTGATGTCGGTGCTGCAATTCAAGAG
GTTATGGAATCCTATGAGGTTGAAATCAACGGAAAGGTATTCCAAGTTAAGAGCATCCGA
AATCTGAATGGGCACAGTATAGGCCAGTATCAAATCCACGCAGGAAAATCTGTTCCGATT
GTTAAAGGAGGAGAACAAACCAAAATGGAAGAGGGTGAATTTTATGCAATTGAGACGTTT
GGATCAACAGGGAAGGGATACGTGAGGGAAGATCTAGAATGCAGCCATTATATGAAAAAC
TTTGATATTGGACACATTCCACTGCGGCTGCCTAGAGCCAAGCAACTGCTGGCAACAATA
AATAAGAACTTCTCCACATTGGCATTCTGTAGACGTTATCTAGACCGCGTCGGTGAGACA
AAATATCTGATGGCATTGAAGAACTTATGTGATGCTGGAATTGTTCAGCCATATCCCCCA
CTTTGCGATAACAAAGGTAGCTACGTATCTCAGTTTGAGCACACCATTTTACTTCGTCCG
ACTTGCAAAGAGGTCGTATCAAGAGGCGATGACTACTAA