Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055078
CDS Infomation

pacid=37439962 polypeptide=PGSC0003DMP400037047 locus=PGSC0003DMG400021372 ID=PGSC0003DMT400055078.v4.03 annot-version=v4.03
Sequence

ATGGATTTACAGATCTATGGTTTCTTGTTCACTTTGTTTCTCACATTCGCCATTAATGGT
GCTACATTACAAGAAAAAACCCAAATAACACCTCCTCAAATCAACTCAAACTCAGTTCTT
GTAGCCCTTTTGGATTCACACTACACTGAGCTCTCCGAGCTAGTTGAAAAAGCTCTCCTT
CTTCAACCACTCGAAGAAGCTGTAACTAAGCACAATATCACCATTTTCGCACCAAGAAAT
GAAGCTCTGGAGCGTGATTTAGATCCCGAGTTCAAGCGTTTCTTGCTTGAACCCGGGAAC
ATTAAATCCCTCCAGAACCTCCTCTTATTCCACATGGTGCCAACCCGACTCACGAGCTGG
CACCAGAAGAATCACACAACTCTCTGCCCCGGAGAGGCTGAACGCCTCTCCGGGAACATG
GTGAATATCATTCACCCGAATGATATAATCAAATCAGACGGAATCATTCACGGAATCAAA
AAGGTTTTAATCCCTAAATCCGTACAACAATCCTTCAACAACCGAAGAAATCTCCGGTCG
ATTTCAGCCGTGCTCCCAGAGGGAGCACCAGAAATCGACCCGAGAACAAACCGATTGAAG
AAAAAACCCAAACCAGTACCCGCCGGAGCTCCACCGGTGCTACCAATTTACTCCGCAATG
GCACCAGGTCCATCACTAGCTCCGGCACCAGCACCAGGTCCCGGCGGACATCACCACCAC
TTCGACGGTGAAACTCAGGTGAAGGATTTCATCCAAACCCTATTACATTACGGTGGATAC
AACGAATTAGCCGACATTTTAGTAAATTTAACATCGTTAGCTACTGAAATGGGGAGATTA
GTTTCAGAAGGATATGTATTAACTGTTTTAGCTCCGAATGATGAGGCTATGGCAAAATTG
ACAACCGATCAGTTATCGGAACCCGGTGCACCGGAACAGATAATGTATTATCATCTGATA
CCGGAGTATCAAACAGAGGAGAGTATGTATAATTCAGTACGAAGATTTGGGAAAGTGAAA
TATGATACATTGAGATTGCCACATAAAGTTGTTGCTGAAGAAGCTGATGGGTCTGTGAAA
TTCGGGTTTGAAGAAGGATCGGCGTATTTGATTGATCCCGATATTTATACCGACGGGAGG
ATTTCCGTTCAGGGAATTGACGGAGTTCTTTTTCCGGTGGAGGATATTAAGGTGGCTCCA
AAATCTGCTCCTGTTGTTGCTGCTGCTGGTGATGCTAAAGTTGTTGCTAAACAAAGAAGA
GGAAAGTTGATGGAAGTAGCATGTAGTATGATGGGGTCATTTTGTCATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037047
PEP Infomation

pacid=37439962 transcript=PGSC0003DMT400055078 locus=PGSC0003DMG400021372 ID=PGSC0003DMT400055078.v4.03 annot-version=v4.03
Sequence

MDLQIYGFLFTLFLTFAINGATLQEKTQITPPQINSNSVLVALLDSHYTELSELVEKALL
LQPLEEAVTKHNITIFAPRNEALERDLDPEFKRFLLEPGNIKSLQNLLLFHMVPTRLTSW
HQKNHTTLCPGEAERLSGNMVNIIHPNDIIKSDGIIHGIKKVLIPKSVQQSFNNRRNLRS
ISAVLPEGAPEIDPRTNRLKKKPKPVPAGAPPVLPIYSAMAPGPSLAPAPAPGPGGHHHH
FDGETQVKDFIQTLLHYGGYNELADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKL
TTDQLSEPGAPEQIMYYHLIPEYQTEESMYNSVRRFGKVKYDTLRLPHKVVAEEADGSVK
FGFEEGSAYLIDPDIYTDGRISVQGIDGVLFPVEDIKVAPKSAPVVAAAGDAKVVAKQRR
GKLMEVACSMMGSFCH*

Transcript Sequence

Transcript ID

PGSC0003DMT400055078
Transcript Infomation

pacid=37439962 locus=PGSC0003DMG400021372 ID=PGSC0003DMT400055078.v4.03 annot-version=v4.03
Sequence

ATGGATTTACAGATCTATGGTTTCTTGTTCACTTTGTTTCTCACATTCGCCATTAATGGT
GCTACATTACAAGAAAAAACCCAAATAACACCTCCTCAAATCAACTCAAACTCAGTTCTT
GTAGCCCTTTTGGATTCACACTACACTGAGCTCTCCGAGCTAGTTGAAAAAGCTCTCCTT
CTTCAACCACTCGAAGAAGCTGTAACTAAGCACAATATCACCATTTTCGCACCAAGAAAT
GAAGCTCTGGAGCGTGATTTAGATCCCGAGTTCAAGCGTTTCTTGCTTGAACCCGGGAAC
ATTAAATCCCTCCAGAACCTCCTCTTATTCCACATGGTGCCAACCCGACTCACGAGCTGG
CACCAGAAGAATCACACAACTCTCTGCCCCGGAGAGGCTGAACGCCTCTCCGGGAACATG
GTGAATATCATTCACCCGAATGATATAATCAAATCAGACGGAATCATTCACGGAATCAAA
AAGGTTTTAATCCCTAAATCCGTACAACAATCCTTCAACAACCGAAGAAATCTCCGGTCG
ATTTCAGCCGTGCTCCCAGAGGGAGCACCAGAAATCGACCCGAGAACAAACCGATTGAAG
AAAAAACCCAAACCAGTACCCGCCGGAGCTCCACCGGTGCTACCAATTTACTCCGCAATG
GCACCAGGTCCATCACTAGCTCCGGCACCAGCACCAGGTCCCGGCGGACATCACCACCAC
TTCGACGGTGAAACTCAGGTGAAGGATTTCATCCAAACCCTATTACATTACGGTGGATAC
AACGAATTAGCCGACATTTTAGTAAATTTAACATCGTTAGCTACTGAAATGGGGAGATTA
GTTTCAGAAGGATATGTATTAACTGTTTTAGCTCCGAATGATGAGGCTATGGCAAAATTG
ACAACCGATCAGTTATCGGAACCCGGTGCACCGGAACAGATAATGTATTATCATCTGATA
CCGGAGTATCAAACAGAGGAGAGTATGTATAATTCAGTACGAAGATTTGGGAAAGTGAAA
TATGATACATTGAGATTGCCACATAAAGTTGTTGCTGAAGAAGCTGATGGGTCTGTGAAA
TTCGGGTTTGAAGAAGGATCGGCGTATTTGATTGATCCCGATATTTATACCGACGGGAGG
ATTTCCGTTCAGGGAATTGACGGAGTTCTTTTTCCGGTGGAGGATATTAAGGTGGCTCCA
AAATCTGCTCCTGTTGTTGCTGCTGCTGGTGATGCTAAAGTTGTTGCTAAACAAAGAAGA
GGAAAGTTGATGGAAGTAGCATGTAGTATGATGGGGTCATTTTGTCATTAA