Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055068
CDS Infomation

pacid=37438355 polypeptide=PGSC0003DMP400037038 locus=PGSC0003DMG400021369 ID=PGSC0003DMT400055068.v4.03 annot-version=v4.03
Sequence

ATGGTGGTGAAGATGATGAAATGGCGTCCATGGCCACCTCTCATTTCTAAGAAATTTGAG
GTAAAGATTTTTGTAGGAAAGGTTGAAAATTTGGTGTGTGAGGTGGCTTCTAGCGGTGGT
GTTGCGGTGGAGATCAGGTGGAAAGGACCACCAAAAATAGCTTTGAGTTCTTTTATAAAG
ACAGTGAAAAGGAACTGTACTAGAGAAGAAATGGTGAAAAATGGACCAAACGGTGGCGTT
TTGGTGGAATGGGATGAAGAATTTCAGAGTTTATGTAATTTGTCTGGTTATAAAGACAAT
GTGTTTCATCCATGGGAGATTGCCTTCACTGTGTTGAATGGTATGAATGGGAAGAATAAG
GCACCTATTGTTGGTTCAGCTGTCTTAAATGTTGCTGAATTTGCTGCCAAGATAGAGGAG
AGAGAATTTAAACTGAACATTCCACTGGTTGTTCCAGGGGGTGCTTCCGATACTCGGCCC
ATGCTTTGTATATCGCTTAGCTTGTTCGAACTAAGAGCTACCCAAGAGTCAACAGAGTTG
GTTCAGAGGCCACTAGCTCCTGTCCAATCTCCAGCACGGTCCGTAGAAACTCCACCAGTA
GAAAAGGATGAGCTTTCTGCGCTCAAAGCTGGCCTCAGAAAGGTTAAAATATTTACGGAG
TATGTATCAACTCGGAGAGCAAAGAAAGCTTGTCGAGAAGAGGAGGGTAGTGAAGAAAGA
AGCTCAGCGAGGAGCGAAGAGGGGGAATATGCATATCCTTTTGATTCTGAGTCCAATGAT
GAGTATGAAGAAGGAGAGTCAGATGAGGCAAAGGAGGATCCTACTGTTAGGAAGTCATTT
AGTTATGGTCCATTGGCTTATGCGAATTGTGCAGGAGTTTCTTTTCATTCTAGTACAAGG
GTCAACGGTGAGGGTGAGGATTGGGTTTACTTTAGCAACCGTAGATCAGATGTGGGCTGC
TCACAAATGGATGACCAGGTCACCTGTGCTTCTGATCTTGTAGTTTTGCAGAATTCAAAG
CGCAGTATCCTTCCTTGGAGGAAGAGGAAACTGAGCTTTAGATCTCCTAAATCGAAGGGG
GAACCGTTGTTGAAGAAGGATAATGGGGAAGAAGGTGGAGATGATATTGACTTCGATCGT
CGGCAGCTCAGTTCTGATGAAGCTCTTTCATTTGGGCTGTACAAGGTGGAGGAAGACTCG
ACTGCTAATCGATCTTCAGTATCTGAGTTTGGTGATGACAATTTTGCTGTTGGCTGTTGG
GAACAGAAAGAGATAGTAAGTCGGGATGGACACATGAAGCTTCAAACTCAGGTGTTCTTT
GCTTCTATTGACCAGCGCAGTGAACAAGCTGCTGGAGAAAGTGCATGCACAGCCCTTGTG
GCTGTGGTTGCTGATTGGTTGCAGAACAATCGCGATCTCATGCCAATTAAATCACAGTTT
GATAGCTTAATTAGAGAAGGTTCATTAGAATGGAGGAAACTTTGTGAAAATGAGACATAC
AGGGAACGGTTCCCTGACAAACACTTTGATCTGGAGACGGTCCTTCAAGCCAAAATTCGC
TCCATATCTGTCGTGCCAGGGAATTCCTTTGTCGGTTTTTTCCACCCTGATGGGATGGAT
GAGGGAGGATTTGATTTCTTGCATGGTGCCATGTCATTCGACAATATCTGGGATGAAATT
AGCCGCGCTGGATTACAGTATGCTTCTGTGCGTGAACCACAAATCTATATCGTCAGCTGG
AACGATCATTTTTTTGTCCTGAAGGTTGAAGCTGAAGCTTACTACATCATCGATACCTTA
GGTGAAAGACTCTATGAAGGCTGCAATCAAGCTTACATTCTGAAGTTTGATAAGGAAACA
ACCATCTATAAACAGCCGGACACTACACAGTCCACAGAAGAAAAACCTGCTGTGGATCAG
CAAACTATTTCTACCACAGCGGAGACAAAACTTAGCGATGGTCCTCATACAAATGCAACG
CATGGTTCTCTAGAGAGTGAAGCTGTGAACGAAACAGATGAACCATCGAAGGCTGAGAGC
GTAGAAGAAATTATCTGTCAAGGCAAAGAGTCATGCAAAGACTACATCAAGAGTTTTTTG
GCTGCCATACCAATCAGGGAACTGCAGGCAGATATCAAGAAGGGTTTGAAAACATCAACC
CCTCTTCATCAGCGGCTTCAGATTGAACTTCATTTCACTCATTTACAACAACAACCACTC
ATAACTACTCCGGCAATAGAGATAGCAACGGCTGCACAAGAACTGCCTGCAGTTGCAATG
ACTGAGATCTCGGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037038
PEP Infomation

pacid=37438355 transcript=PGSC0003DMT400055068 locus=PGSC0003DMG400021369 ID=PGSC0003DMT400055068.v4.03 annot-version=v4.03
Sequence

MVVKMMKWRPWPPLISKKFEVKIFVGKVENLVCEVASSGGVAVEIRWKGPPKIALSSFIK
TVKRNCTREEMVKNGPNGGVLVEWDEEFQSLCNLSGYKDNVFHPWEIAFTVLNGMNGKNK
APIVGSAVLNVAEFAAKIEEREFKLNIPLVVPGGASDTRPMLCISLSLFELRATQESTEL
VQRPLAPVQSPARSVETPPVEKDELSALKAGLRKVKIFTEYVSTRRAKKACREEEGSEER
SSARSEEGEYAYPFDSESNDEYEEGESDEAKEDPTVRKSFSYGPLAYANCAGVSFHSSTR
VNGEGEDWVYFSNRRSDVGCSQMDDQVTCASDLVVLQNSKRSILPWRKRKLSFRSPKSKG
EPLLKKDNGEEGGDDIDFDRRQLSSDEALSFGLYKVEEDSTANRSSVSEFGDDNFAVGCW
EQKEIVSRDGHMKLQTQVFFASIDQRSEQAAGESACTALVAVVADWLQNNRDLMPIKSQF
DSLIREGSLEWRKLCENETYRERFPDKHFDLETVLQAKIRSISVVPGNSFVGFFHPDGMD
EGGFDFLHGAMSFDNIWDEISRAGLQYASVREPQIYIVSWNDHFFVLKVEAEAYYIIDTL
GERLYEGCNQAYILKFDKETTIYKQPDTTQSTEEKPAVDQQTISTTAETKLSDGPHTNAT
HGSLESEAVNETDEPSKAESVEEIICQGKESCKDYIKSFLAAIPIRELQADIKKGLKTST
PLHQRLQIELHFTHLQQQPLITTPAIEIATAAQELPAVAMTEISV*

Transcript Sequence

Transcript ID

PGSC0003DMT400055068
Transcript Infomation

pacid=37438355 locus=PGSC0003DMG400021369 ID=PGSC0003DMT400055068.v4.03 annot-version=v4.03
Sequence

ATGGTGGTGAAGATGATGAAATGGCGTCCATGGCCACCTCTCATTTCTAAGAAATTTGAG
GTAAAGATTTTTGTAGGAAAGGTTGAAAATTTGGTGTGTGAGGTGGCTTCTAGCGGTGGT
GTTGCGGTGGAGATCAGGTGGAAAGGACCACCAAAAATAGCTTTGAGTTCTTTTATAAAG
ACAGTGAAAAGGAACTGTACTAGAGAAGAAATGGTGAAAAATGGACCAAACGGTGGCGTT
TTGGTGGAATGGGATGAAGAATTTCAGAGTTTATGTAATTTGTCTGGTTATAAAGACAAT
GTGTTTCATCCATGGGAGATTGCCTTCACTGTGTTGAATGGTATGAATGGGAAGAATAAG
GCACCTATTGTTGGTTCAGCTGTCTTAAATGTTGCTGAATTTGCTGCCAAGATAGAGGAG
AGAGAATTTAAACTGAACATTCCACTGGTTGTTCCAGGGGGTGCTTCCGATACTCGGCCC
ATGCTTTGTATATCGCTTAGCTTGTTCGAACTAAGAGCTACCCAAGAGTCAACAGAGTTG
GTTCAGAGGCCACTAGCTCCTGTCCAATCTCCAGCACGGTCCGTAGAAACTCCACCAGTA
GAAAAGGATGAGCTTTCTGCGCTCAAAGCTGGCCTCAGAAAGGTTAAAATATTTACGGAG
TATGTATCAACTCGGAGAGCAAAGAAAGCTTGTCGAGAAGAGGAGGGTAGTGAAGAAAGA
AGCTCAGCGAGGAGCGAAGAGGGGGAATATGCATATCCTTTTGATTCTGAGTCCAATGAT
GAGTATGAAGAAGGAGAGTCAGATGAGGCAAAGGAGGATCCTACTGTTAGGAAGTCATTT
AGTTATGGTCCATTGGCTTATGCGAATTGTGCAGGAGTTTCTTTTCATTCTAGTACAAGG
GTCAACGGTGAGGGTGAGGATTGGGTTTACTTTAGCAACCGTAGATCAGATGTGGGCTGC
TCACAAATGGATGACCAGGTCACCTGTGCTTCTGATCTTGTAGTTTTGCAGAATTCAAAG
CGCAGTATCCTTCCTTGGAGGAAGAGGAAACTGAGCTTTAGATCTCCTAAATCGAAGGGG
GAACCGTTGTTGAAGAAGGATAATGGGGAAGAAGGTGGAGATGATATTGACTTCGATCGT
CGGCAGCTCAGTTCTGATGAAGCTCTTTCATTTGGGCTGTACAAGGTGGAGGAAGACTCG
ACTGCTAATCGATCTTCAGTATCTGAGTTTGGTGATGACAATTTTGCTGTTGGCTGTTGG
GAACAGAAAGAGATAGTAAGTCGGGATGGACACATGAAGCTTCAAACTCAGGTGTTCTTT
GCTTCTATTGACCAGCGCAGTGAACAAGCTGCTGGAGAAAGTGCATGCACAGCCCTTGTG
GCTGTGGTTGCTGATTGGTTGCAGAACAATCGCGATCTCATGCCAATTAAATCACAGTTT
GATAGCTTAATTAGAGAAGGTTCATTAGAATGGAGGAAACTTTGTGAAAATGAGACATAC
AGGGAACGGTTCCCTGACAAACACTTTGATCTGGAGACGGTCCTTCAAGCCAAAATTCGC
TCCATATCTGTCGTGCCAGGGAATTCCTTTGTCGGTTTTTTCCACCCTGATGGGATGGAT
GAGGGAGGATTTGATTTCTTGCATGGTGCCATGTCATTCGACAATATCTGGGATGAAATT
AGCCGCGCTGGATTACAGTATGCTTCTGTGCGTGAACCACAAATCTATATCGTCAGCTGG
AACGATCATTTTTTTGTCCTGAAGGTTGAAGCTGAAGCTTACTACATCATCGATACCTTA
GGTGAAAGACTCTATGAAGGCTGCAATCAAGCTTACATTCTGAAGTTTGATAAGGAAACA
ACCATCTATAAACAGCCGGACACTACACAGTCCACAGAAGAAAAACCTGCTGTGGATCAG
CAAACTATTTCTACCACAGCGGAGACAAAACTTAGCGATGGTCCTCATACAAATGCAACG
CATGGTTCTCTAGAGAGTGAAGCTGTGAACGAAACAGATGAACCATCGAAGGCTGAGAGC
GTAGAAGAAATTATCTGTCAAGGCAAAGAGTCATGCAAAGACTACATCAAGAGTTTTTTG
GCTGCCATACCAATCAGGGAACTGCAGGCAGATATCAAGAAGGGTTTGAAAACATCAACC
CCTCTTCATCAGCGGCTTCAGATTGAACTTCATTTCACTCATTTACAACAACAACCACTC
ATAACTACTCCGGCAATAGAGATAGCAACGGCTGCACAAGAACTGCCTGCAGTTGCAATG
ACTGAGATCTCGGTGTAA