Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055055
CDS Infomation

pacid=37435557 polypeptide=PGSC0003DMP400037030 locus=PGSC0003DMG400021362 ID=PGSC0003DMT400055055.v4.03 annot-version=v4.03
Sequence

ATGAGCTGCTCATCCTCTTTGATTCTTCCATCCATTTCTTCGAATGGATTTCGAAGATTT
AGTCCATTGAAATTGGATAAGTCTAGGGTTTTCATGAGTAGCATTTCCGTTGGATCACGA
ATTGCCGCCGTCGATGATGCTCTGTTCACTGATTACAAGCCTACCAATGCTTTTCTCTTC
CCTGGACAGGGGGCACAAGCTGTTGGAATGGGTGCAGAGGCTCAGAAGGTGCCTGCTGCA
GCTGAATTATACAAGAGAGCAAATGAAATCATGGGGTTTGACCTTTTGGATATTTGTATT
AATGGTCCAAAAGAGAAGTTAGACTCCACTGTTCTAAGCCAGCCAGCTATCTATGTCACT
AGCTTAGCTGCGGTAGAGATACTCCGTGCTCGTGAGGGGGGTCAGCAAATAATTGATTCG
GTTGACGTCACATGTGGTCTGAGCTTGGGTGAATACACTGCTCTGGCATTTACAGGAGCT
TTCAGTTTTGAGGATGGGCTTAAGCTGGTTAAGCTTAGAGGAGAAGCTATGCAGGATGCT
GCTGATGCTGCAAAAAGTGCAATGGTTAGTATAATTGGACTGGATTCTGAAAAGGTTCAG
AAACTGTGTGATGCAGCTAATGAAGAAGTTGATGAAGCCAACAAAGTTCAGATTGCAAAT
TTCTTATGCCCCGGAAATTATGCAGTCTCTGGAGGTGTTAAAGGAATTGAAGCAGTAGAA
GCAAAAGCAAAATCGTTCAAAGCACGAATGACGGTACGTCTAGCTGTTGCCGGTGCTTTT
CACACAAGTTTTATGAATCCAGCTGTCTCAAGATTAGAAGCTGCTTTGGGTGCAACAGAG
ATCAGAACTCCCAGAATACCAGTAATATCAAATGTTGATGCACAACCACATGCAGATCCA
GATACAATTAAGAAAATATTAGCTAGCCAGGTGACTTCACCAGTTCAATGGGAGACCACA
ATGAAAACTCTCCTATCAAAAGGGCTAAAGAAGAGCTACGAATTAGGTCCTGGAAAGGTT
ATTGCCGGTATTGTCAAGAGGATGGACAGAGGTGCTGAAATTGAGAACATTGGTGCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037030
PEP Infomation

pacid=37435557 transcript=PGSC0003DMT400055055 locus=PGSC0003DMG400021362 ID=PGSC0003DMT400055055.v4.03 annot-version=v4.03
Sequence

MSCSSSLILPSISSNGFRRFSPLKLDKSRVFMSSISVGSRIAAVDDALFTDYKPTNAFLF
PGQGAQAVGMGAEAQKVPAAAELYKRANEIMGFDLLDICINGPKEKLDSTVLSQPAIYVT
SLAAVEILRAREGGQQIIDSVDVTCGLSLGEYTALAFTGAFSFEDGLKLVKLRGEAMQDA
ADAAKSAMVSIIGLDSEKVQKLCDAANEEVDEANKVQIANFLCPGNYAVSGGVKGIEAVE
AKAKSFKARMTVRLAVAGAFHTSFMNPAVSRLEAALGATEIRTPRIPVISNVDAQPHADP
DTIKKILASQVTSPVQWETTMKTLLSKGLKKSYELGPGKVIAGIVKRMDRGAEIENIGA*

Transcript Sequence

Transcript ID

PGSC0003DMT400055055
Transcript Infomation

pacid=37435557 locus=PGSC0003DMG400021362 ID=PGSC0003DMT400055055.v4.03 annot-version=v4.03
Sequence

ATGAGCTGCTCATCCTCTTTGATTCTTCCATCCATTTCTTCGAATGGATTTCGAAGATTT
AGTCCATTGAAATTGGATAAGTCTAGGGTTTTCATGAGTAGCATTTCCGTTGGATCACGA
ATTGCCGCCGTCGATGATGCTCTGTTCACTGATTACAAGCCTACCAATGCTTTTCTCTTC
CCTGGACAGGGGGCACAAGCTGTTGGAATGGGTGCAGAGGCTCAGAAGGTGCCTGCTGCA
GCTGAATTATACAAGAGAGCAAATGAAATCATGGGGTTTGACCTTTTGGATATTTGTATT
AATGGTCCAAAAGAGAAGTTAGACTCCACTGTTCTAAGCCAGCCAGCTATCTATGTCACT
AGCTTAGCTGCGGTAGAGATACTCCGTGCTCGTGAGGGGGGTCAGCAAATAATTGATTCG
GTTGACGTCACATGTGGTCTGAGCTTGGGTGAATACACTGCTCTGGCATTTACAGGAGCT
TTCAGTTTTGAGGATGGGCTTAAGCTGGTTAAGCTTAGAGGAGAAGCTATGCAGGATGCT
GCTGATGCTGCAAAAAGTGCAATGGTTAGTATAATTGGACTGGATTCTGAAAAGGTTCAG
AAACTGTGTGATGCAGCTAATGAAGAAGTTGATGAAGCCAACAAAGTTCAGATTGCAAAT
TTCTTATGCCCCGGAAATTATGCAGTCTCTGGAGGTGTTAAAGGAATTGAAGCAGTAGAA
GCAAAAGCAAAATCGTTCAAAGCACGAATGACGGTACGTCTAGCTGTTGCCGGTGCTTTT
CACACAAGTTTTATGAATCCAGCTGTCTCAAGATTAGAAGCTGCTTTGGGTGCAACAGAG
ATCAGAACTCCCAGAATACCAGTAATATCAAATGTTGATGCACAACCACATGCAGATCCA
GATACAATTAAGAAAATATTAGCTAGCCAGGTGACTTCACCAGTTCAATGGGAGACCACA
ATGAAAACTCTCCTATCAAAAGGGCTAAAGAAGAGCTACGAATTAGGTCCTGGAAAGGTT
ATTGCCGGTATTGTCAAGAGGATGGACAGAGGTGCTGAAATTGAGAACATTGGTGCCTAA