Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055044
CDS Infomation

pacid=37439524 polypeptide=PGSC0003DMP400037022 locus=PGSC0003DMG400021355 ID=PGSC0003DMT400055044.v4.03 annot-version=v4.03
Sequence

ATGCTGGAAGGTATACGGCTGCGAGGCGTTTGGCCTCCTCCGCCTGGCTGCCTTAGGGCA
GTTAGGCTTACCCTTGCCTTAAGAGCCATGTACATGGATTTGATTCTTGCATCTACTTAT
TTGACTGCTCTGCCTAATGAATTGAAGACATCAAGCAAGATTGGAGATAGACCAACCAGT
GATGTTGTCGTAAGACTTAGAACACAGGATGGCCGTGATGATTGGCTTTACTGTCATTCA
CATATTCTCGTTGAAGAGAGTAAATATTTTGCTGATCGGTTATCAGATAGTTGGCCGACA
TGTCAGATTCTGGATTCACGCAATTGTGTTGAGGTTTACTGTGAAGAACCTGATCTGGAC
TCCCATGTCAATGTCCTTCGACTCTTTTATGTCATTGCGGATGGCTTAATGATGGAAATT
TGCCATGGTGTCAAGAATGCACTTGGCATTTTGCGAGTTGCTGTCAAACTTGGATGCCCA
AGAATTATTGCAGTATGTGTGGATTATTTGGAAGCAGTCCCTTGGGAGGAAGCTGAAGAG
GAGGAGATATTAAATACTATACCAAGCATGGGATCTAAGGTGGAACCAGTACTTGCTCGC
CTCCAACCAGTCAATCCTACTGCAGTAATGAAGATTTTTCTTGCAGCCCTTCAATTTGCT
ACGTCATCACCTCCTTCACCTTTGAATGATCTGAAAAACACTGCTCAAGAACAACTTGAA
TACATGCTTACCGAGGACGATGATGCTCCTTTACTGAGCGCTGATGAAGAGATAAAGCTA
GAAGTCATGCGATGTGTCAAGAAGCTGCTTGATAGATTTAACAGCATTGTAGAATCTCTA
CTATGTGACCTCCAAGAATCGATTTCAGATTCTGGGAAAATGCAATCGTTGCATTCTTGT
TTGACAGATTTGTTATGGGCATGTCAGATATTAGGAAAGTTGGAGATTATCAGAGATTTT
GTTTGCAGCTGGACGGAGTTGTCAATGAAGCTAGTAACCATCGTTCAACAAAAAGATGGA
GAAAATCAAATTCTGAAGACAAAGCTGAAGGTTCTTGAGGTGACTGCAAAAGTATTAGAG
GCAATAGGCTATGGCATAGTTGTGTTACCTACAGTAAAACGACTTCACATGGTGAAGCTC
TGGCTTCCTTTTGTCCGGACGATGAAGCCTTTAGTCGATTCTGTCTCCGAGGAAACTGAG
GAAGATCTCACACTAAAATTCGATAGTGAGATCTGGCAATCTTTGGAATCAGCATTTGTT
GCTATTATACTTACATTGTCGTCAGTTGATCAGACAGACATTTTAACAGAGTGGTTGGAA
AATCAACAGATTCGATATCCAGACCTCACCGAGGCATTTGAAGTTTGGTGTTACAGGTCC
AAGGTAGCTAAGCGAAGGCTGGCAACACTTGGGGAAGAACACAATACAGCTAAGGCAGTA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400037022
PEP Infomation

pacid=37439524 transcript=PGSC0003DMT400055044 locus=PGSC0003DMG400021355 ID=PGSC0003DMT400055044.v4.03 annot-version=v4.03
Sequence

MLEGIRLRGVWPPPPGCLRAVRLTLALRAMYMDLILASTYLTALPNELKTSSKIGDRPTS
DVVVRLRTQDGRDDWLYCHSHILVEESKYFADRLSDSWPTCQILDSRNCVEVYCEEPDLD
SHVNVLRLFYVIADGLMMEICHGVKNALGILRVAVKLGCPRIIAVCVDYLEAVPWEEAEE
EEILNTIPSMGSKVEPVLARLQPVNPTAVMKIFLAALQFATSSPPSPLNDLKNTAQEQLE
YMLTEDDDAPLLSADEEIKLEVMRCVKKLLDRFNSIVESLLCDLQESISDSGKMQSLHSC
LTDLLWACQILGKLEIIRDFVCSWTELSMKLVTIVQQKDGENQILKTKLKVLEVTAKVLE
AIGYGIVVLPTVKRLHMVKLWLPFVRTMKPLVDSVSEETEEDLTLKFDSEIWQSLESAFV
AIILTLSSVDQTDILTEWLENQQIRYPDLTEAFEVWCYRSKVAKRRLATLGEEHNTAKAV
*

Transcript Sequence

Transcript ID

PGSC0003DMT400055044
Transcript Infomation

pacid=37439524 locus=PGSC0003DMG400021355 ID=PGSC0003DMT400055044.v4.03 annot-version=v4.03
Sequence

ATGCTGGAAGGTATACGGCTGCGAGGCGTTTGGCCTCCTCCGCCTGGCTGCCTTAGGGCA
GTTAGGCTTACCCTTGCCTTAAGAGCCATGTACATGGATTTGATTCTTGCATCTACTTAT
TTGACTGCTCTGCCTAATGAATTGAAGACATCAAGCAAGATTGGAGATAGACCAACCAGT
GATGTTGTCGTAAGACTTAGAACACAGGATGGCCGTGATGATTGGCTTTACTGTCATTCA
CATATTCTCGTTGAAGAGAGTAAATATTTTGCTGATCGGTTATCAGATAGTTGGCCGACA
TGTCAGATTCTGGATTCACGCAATTGTGTTGAGGTTTACTGTGAAGAACCTGATCTGGAC
TCCCATGTCAATGTCCTTCGACTCTTTTATGTCATTGCGGATGGCTTAATGATGGAAATT
TGCCATGGTGTCAAGAATGCACTTGGCATTTTGCGAGTTGCTGTCAAACTTGGATGCCCA
AGAATTATTGCAGTATGTGTGGATTATTTGGAAGCAGTCCCTTGGGAGGAAGCTGAAGAG
GAGGAGATATTAAATACTATACCAAGCATGGGATCTAAGGTGGAACCAGTACTTGCTCGC
CTCCAACCAGTCAATCCTACTGCAGTAATGAAGATTTTTCTTGCAGCCCTTCAATTTGCT
ACGTCATCACCTCCTTCACCTTTGAATGATCTGAAAAACACTGCTCAAGAACAACTTGAA
TACATGCTTACCGAGGACGATGATGCTCCTTTACTGAGCGCTGATGAAGAGATAAAGCTA
GAAGTCATGCGATGTGTCAAGAAGCTGCTTGATAGATTTAACAGCATTGTAGAATCTCTA
CTATGTGACCTCCAAGAATCGATTTCAGATTCTGGGAAAATGCAATCGTTGCATTCTTGT
TTGACAGATTTGTTATGGGCATGTCAGATATTAGGAAAGTTGGAGATTATCAGAGATTTT
GTTTGCAGCTGGACGGAGTTGTCAATGAAGCTAGTAACCATCGTTCAACAAAAAGATGGA
GAAAATCAAATTCTGAAGACAAAGCTGAAGGTTCTTGAGGTGACTGCAAAAGTATTAGAG
GCAATAGGCTATGGCATAGTTGTGTTACCTACAGTAAAACGACTTCACATGGTGAAGCTC
TGGCTTCCTTTTGTCCGGACGATGAAGCCTTTAGTCGATTCTGTCTCCGAGGAAACTGAG
GAAGATCTCACACTAAAATTCGATAGTGAGATCTGGCAATCTTTGGAATCAGCATTTGTT
GCTATTATACTTACATTGTCGTCAGTTGATCAGACAGACATTTTAACAGAGTGGTTGGAA
AATCAACAGATTCGATATCCAGACCTCACCGAGGCATTTGAAGTTTGGTGTTACAGGTCC
AAGGTAGCTAAGCGAAGGCTGGCAACACTTGGGGAAGAACACAATACAGCTAAGGCAGTA
TGA