Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055029
CDS Infomation

pacid=37436592 polypeptide=PGSC0003DMP400037009 locus=PGSC0003DMG400021350 ID=PGSC0003DMT400055029.v4.03 annot-version=v4.03
Sequence

ATGCAGAAAGGTTCAATACATGAAGAGTTTGCTTTAAAGCAAACAGCTCCGAAAATTGTT
GGATCAGGGGTGATGATAGGAGGAGATAAGGTAACCGTTGCCTATGACCTCGTCGAGCAA
ATGGAATACCTCTATGTTCGTGTTGTCAAGGCTAAAGAGTTAACAAAGGATGTTACAGGG
AGCTGTGATCCTTATGTTGAAGTAAAAGTTGGGAACTACAAGGGCATCACGAAGCATTTC
GAGAAGAAAATCAACCCTGAATGGAATTATGTGTTCGCGTTCTCTCAGGATAGGCTTCAA
GCTTCTTACATTGAAGTATGTGTGAAAGATAAGGATGTTGTGTTGGATGATATGATAGGA
AGAGTCGTGTTTGATCTCGTTGATGTACCGAGAAGAGTTCCACCGGATAGTTCATTAGCC
CCACAATGGTATAGGTTAGAGGATAAAAGAGGTGAAAAGTTGAAAAAAGGGGAAATCATG
CTTGCTGTTTGGAGAGGAACTCAAGCAGACGAGGCGTTTTGTGATGCGTGGCATTCGGAT
GCAGCAGCTGTGGGAAGTGAGGGGATTTCAAGAATTAGAGGAAAGGTATATCTTTCTCCT
AGACTTTGGTATATCAGAGTTAATGTCATTGAATGTCAAGATTTGCTTCCAAGTGAAAAG
AATCGACAACCCGAGTGCTGTGTGAAGGTTATGTGTGGGAATCAGGTCTTGAAAACGAAA
ATTTCTCCGATAAAAAGTTGCAATCCAATGTGGAATGAGGACTTGGTTTTTGTTGTAGCT
GAACCATTTGAAGAGCCTTTGGTTATAACTGTGGAGGATAAAGTTGGATCGAATTTCGAG
TTTTTGGGAAAATGTGTGCTTCCTTTAAGCATTGTCCCTAGAAGGCTTGACAACAAACCT
GTTCCTTCTAAATGGCACAATCTTGAGAAGCATACAGTTGTAGAAGGGGAAAAAAAGGAG
ACTAAATTTGCTAGTAAGATTCATATGAGGCTTAGTTTGGATGGCGGATATCACGTGTTG
GATGAATCGATACATTACAGTAGTGATTTCAAGCCAACGTCGAAGCTTTTATGGAGATCC
AGCATTGGACTACTTGAATTGGGGATAATAAGTGCAACAGGATTGTCAGCTATGAAGTCC
AAGGATGGACGAGGGACGACAGATGCCTATTGTGTAGCTAAGTACGGGCCAAAATGGGTT
CGTACAAGGACAATCATCGATAGCTTGTCACCACAATGGAATGAGCAGTACACTTGGGAA
GTACATGATCCTTGTACTGTAATCACAGTAGGAGTGTTCGATAACGGATACCTACAAGGG
GGGAAATGTACGAGCATTGGAAAGGTGAGGATTAGGCTCTCGACACTTGAAACAGAGAAG
GTATACACACATTCCTACCCTCTTATTGTCCTGCATCCATCAGGCGTTAAAAAGATGGGA
GAAGTTCAACTAGCTGTAAGGTTTTCGTGTACGTCTTATGTCAATATGTTGTCTAAATAC
ACTCAACCATTATTTCCGAAGATGCATTATGCTCATCCAATGTCTATCAGTCAGCAAGAT
TTCCTCAGGTTCCAAACTATTCAAATACTTTCAACGAGGCTAGGACGAGCAGAGCCACCA
TTGAAAAAAGAGGTCGTGGACTACATGCTAGACGCTGGTTCGCATATATGGAGCATAAGG
AGAGCTAAGGCTAACTTTTTCAGATTAATCTATGTTGTGAGTCCAATATTGGCTATTGGA
AAATGGTTTGATCAAATATGTCATTGGAAGAATCCACTCACAACAATACTAATCCATATA
CTCTTTGTTATATTAGTCCTTTACCCTGAATTGATTGTTCCTACATTCTTTGTTTACCTT
TTCTTGATTGGTATTTGGCACTATAGATTGAAACCAAGACATCCACCTCACATGGACATC
CATATTTCACATGCTCATGGTGTTTTCCCCGATGATTTGGATGAAGAATTCGATACATTC
CCAACATCAAGAGGCTCGGATAAGGTGAGGATGAGATATGATCGTTTGAGGAGCATTGGA
GGCAGGATTCAGACCGTGATAGGGGACTTAGCAACTCAAGGGGAAAGGCTTCATTCATTG
TTAAGCTGGAGAGATCCAAGGGCTTCGGCTTTGTTCGTGACATTCTGTTTGTTTGCTGCA
ATAGTCATGTATGTCACACCATTCCAAGTTGTCGCGCTTCTCATTGGAATCTACGTGTTA
AGGCACCCGAGATTTCGCCATAAACTTCCTCCATTGTCTACTAGTTTCTTCAAGAGGCTG
CCTGCAAGAGCAGACTGCATGTTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400037009
PEP Infomation

pacid=37436592 transcript=PGSC0003DMT400055029 locus=PGSC0003DMG400021350 ID=PGSC0003DMT400055029.v4.03 annot-version=v4.03
Sequence

MQKGSIHEEFALKQTAPKIVGSGVMIGGDKVTVAYDLVEQMEYLYVRVVKAKELTKDVTG
SCDPYVEVKVGNYKGITKHFEKKINPEWNYVFAFSQDRLQASYIEVCVKDKDVVLDDMIG
RVVFDLVDVPRRVPPDSSLAPQWYRLEDKRGEKLKKGEIMLAVWRGTQADEAFCDAWHSD
AAAVGSEGISRIRGKVYLSPRLWYIRVNVIECQDLLPSEKNRQPECCVKVMCGNQVLKTK
ISPIKSCNPMWNEDLVFVVAEPFEEPLVITVEDKVGSNFEFLGKCVLPLSIVPRRLDNKP
VPSKWHNLEKHTVVEGEKKETKFASKIHMRLSLDGGYHVLDESIHYSSDFKPTSKLLWRS
SIGLLELGIISATGLSAMKSKDGRGTTDAYCVAKYGPKWVRTRTIIDSLSPQWNEQYTWE
VHDPCTVITVGVFDNGYLQGGKCTSIGKVRIRLSTLETEKVYTHSYPLIVLHPSGVKKMG
EVQLAVRFSCTSYVNMLSKYTQPLFPKMHYAHPMSISQQDFLRFQTIQILSTRLGRAEPP
LKKEVVDYMLDAGSHIWSIRRAKANFFRLIYVVSPILAIGKWFDQICHWKNPLTTILIHI
LFVILVLYPELIVPTFFVYLFLIGIWHYRLKPRHPPHMDIHISHAHGVFPDDLDEEFDTF
PTSRGSDKVRMRYDRLRSIGGRIQTVIGDLATQGERLHSLLSWRDPRASALFVTFCLFAA
IVMYVTPFQVVALLIGIYVLRHPRFRHKLPPLSTSFFKRLPARADCML*

Transcript Sequence

Transcript ID

PGSC0003DMT400055029
Transcript Infomation

pacid=37436592 locus=PGSC0003DMG400021350 ID=PGSC0003DMT400055029.v4.03 annot-version=v4.03
Sequence

ATGCAGAAAGGTTCAATACATGAAGAGTTTGCTTTAAAGCAAACAGCTCCGAAAATTGTT
GGATCAGGGGTGATGATAGGAGGAGATAAGGTAACCGTTGCCTATGACCTCGTCGAGCAA
ATGGAATACCTCTATGTTCGTGTTGTCAAGGCTAAAGAGTTAACAAAGGATGTTACAGGG
AGCTGTGATCCTTATGTTGAAGTAAAAGTTGGGAACTACAAGGGCATCACGAAGCATTTC
GAGAAGAAAATCAACCCTGAATGGAATTATGTGTTCGCGTTCTCTCAGGATAGGCTTCAA
GCTTCTTACATTGAAGTATGTGTGAAAGATAAGGATGTTGTGTTGGATGATATGATAGGA
AGAGTCGTGTTTGATCTCGTTGATGTACCGAGAAGAGTTCCACCGGATAGTTCATTAGCC
CCACAATGGTATAGGTTAGAGGATAAAAGAGGTGAAAAGTTGAAAAAAGGGGAAATCATG
CTTGCTGTTTGGAGAGGAACTCAAGCAGACGAGGCGTTTTGTGATGCGTGGCATTCGGAT
GCAGCAGCTGTGGGAAGTGAGGGGATTTCAAGAATTAGAGGAAAGGTATATCTTTCTCCT
AGACTTTGGTATATCAGAGTTAATGTCATTGAATGTCAAGATTTGCTTCCAAGTGAAAAG
AATCGACAACCCGAGTGCTGTGTGAAGGTTATGTGTGGGAATCAGGTCTTGAAAACGAAA
ATTTCTCCGATAAAAAGTTGCAATCCAATGTGGAATGAGGACTTGGTTTTTGTTGTAGCT
GAACCATTTGAAGAGCCTTTGGTTATAACTGTGGAGGATAAAGTTGGATCGAATTTCGAG
TTTTTGGGAAAATGTGTGCTTCCTTTAAGCATTGTCCCTAGAAGGCTTGACAACAAACCT
GTTCCTTCTAAATGGCACAATCTTGAGAAGCATACAGTTGTAGAAGGGGAAAAAAAGGAG
ACTAAATTTGCTAGTAAGATTCATATGAGGCTTAGTTTGGATGGCGGATATCACGTGTTG
GATGAATCGATACATTACAGTAGTGATTTCAAGCCAACGTCGAAGCTTTTATGGAGATCC
AGCATTGGACTACTTGAATTGGGGATAATAAGTGCAACAGGATTGTCAGCTATGAAGTCC
AAGGATGGACGAGGGACGACAGATGCCTATTGTGTAGCTAAGTACGGGCCAAAATGGGTT
CGTACAAGGACAATCATCGATAGCTTGTCACCACAATGGAATGAGCAGTACACTTGGGAA
GTACATGATCCTTGTACTGTAATCACAGTAGGAGTGTTCGATAACGGATACCTACAAGGG
GGGAAATGTACGAGCATTGGAAAGGTGAGGATTAGGCTCTCGACACTTGAAACAGAGAAG
GTATACACACATTCCTACCCTCTTATTGTCCTGCATCCATCAGGCGTTAAAAAGATGGGA
GAAGTTCAACTAGCTGTAAGGTTTTCGTGTACGTCTTATGTCAATATGTTGTCTAAATAC
ACTCAACCATTATTTCCGAAGATGCATTATGCTCATCCAATGTCTATCAGTCAGCAAGAT
TTCCTCAGGTTCCAAACTATTCAAATACTTTCAACGAGGCTAGGACGAGCAGAGCCACCA
TTGAAAAAAGAGGTCGTGGACTACATGCTAGACGCTGGTTCGCATATATGGAGCATAAGG
AGAGCTAAGGCTAACTTTTTCAGATTAATCTATGTTGTGAGTCCAATATTGGCTATTGGA
AAATGGTTTGATCAAATATGTCATTGGAAGAATCCACTCACAACAATACTAATCCATATA
CTCTTTGTTATATTAGTCCTTTACCCTGAATTGATTGTTCCTACATTCTTTGTTTACCTT
TTCTTGATTGGTATTTGGCACTATAGATTGAAACCAAGACATCCACCTCACATGGACATC
CATATTTCACATGCTCATGGTGTTTTCCCCGATGATTTGGATGAAGAATTCGATACATTC
CCAACATCAAGAGGCTCGGATAAGGTGAGGATGAGATATGATCGTTTGAGGAGCATTGGA
GGCAGGATTCAGACCGTGATAGGGGACTTAGCAACTCAAGGGGAAAGGCTTCATTCATTG
TTAAGCTGGAGAGATCCAAGGGCTTCGGCTTTGTTCGTGACATTCTGTTTGTTTGCTGCA
ATAGTCATGTATGTCACACCATTCCAAGTTGTCGCGCTTCTCATTGGAATCTACGTGTTA
AGGCACCCGAGATTTCGCCATAAACTTCCTCCATTGTCTACTAGTTTCTTCAAGAGGCTG
CCTGCAAGAGCAGACTGCATGTTGTAG