Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055003
CDS Infomation

pacid=37440825 polypeptide=PGSC0003DMP400036996 locus=PGSC0003DMG400021345 ID=PGSC0003DMT400055003.v4.03 annot-version=v4.03
Sequence

ATGATCTTTGAATCAACATTTTGTGTGCAGAGCTATGAAGATGAACCATTGCCAGGATAC
AAACAACTACACTTAGATCACAATCCAAACTATGCTGAACTTTGGGATGAATATGGATTT
GGAGGAGTAGGAAATGGTAACAATGAATCTGTTTTATCGGATTACAGGAAGGCGAATTCG
ACCTTAAAAAATGGATTTACGAATAGTCTGATCAACTTAGAACCCCACATTTGTCCGGCT
GATGATCAGAGATCGGTCACGAGCTCGTGTACTGATCAAGTCACTACGCGTAAAGCTTCT
CCCATCGCTCGTTACATCAAGTCTCGGAGAAACTCGTTAGGGGACTTGAACTCGATTTCA
TCTTGCAATAAGTGTAAGCCTGCAACAATTAGTACTGAGGTTGATGGTGGTGGTAGTAGT
ACAAGTAAGAGTGGGAAGAACTCGAATGTCATCGTGCCATTGACGGATTCACATGTTTCT
GTTCAATCGCAGCCAAAGAGTAAAGGCGGAATGAACTTGTCGTGGCTGTTCCCTAAGCTA
AAGAAGAAAAACAAGGTTGAAAATTCACCAAACCGAACAGATCAATCCGATGAGGTTTCT
CAGGTCTTAAAGGATCATATAGGGATGGTTTCAATCGAGACGTTGAAGAAAGAGCTAATG
GAAGCAAACGAGAGTAGAGATGCAGCGTTGATTGAAGTCTTGGGAATGAAGTCGTCTTTA
GGTGAGCTAAAGCAAAAGTTAGAGTACTTAGAAACTTACTGTGAAGAGCTGAAAAAGGCC
TTGAGGCAAGCAATTCAAGCTACAGAGTCCCCTGTATCCTCCAAGCTTAGAAATTTTCCT
AAAAACGGAAAATCCATCGATGGGGACGGAGAAAATGTGATCCCGGTTAGTGATGAGGTA
ATGCTAGAAGGGTTCTTACAGATGGTATCGGAGTCAAGATTATCGGTGAAACAGTTCTGC
AAGACTCTAATAGGACAGATTGAAGAAACAGACAATTTGTTAACTGATAACTTGAACCTT
TTGCTTCAACCTTACAAGCTATCTCTCAACTCGAAGTACTCGAAAGCAGTTCTATACCAC
ATTGAATCCATCATAAACCAATCACTTTTCCAAGACTTTGAAAACTGTGTGTTCCAAAAG
AATGGCTCATCAAAACACTTAGACCCTCAACATGATCGCCACGCTCAGTTCTCATCATTT
GTCGCGTTGAGGAACCTAAGTTGGAATGAGGTGTTGAGGAAGGGTACAAAGTACTATAGC
GAAGAGTTCAGTAAGTTCTGTGATCAGAAAATGAGTTGCATTATCGCAACGCTTAATTGG
ACAAGGCCATGGCCTGAACAACTCCTCCAAGCGTTCTTCGTTGCTGCTAAGTGCATTTGG
TTGCTGCATTTGTTAGCCTTTTCGTTCAATCCTTCTCTCGGGATTCTACGAGTGGAAGAG
AATAGAACTTTCGATATGCATTACATGGAGGACGTTTTCGCGGATAGACAAAGATCACAA
GGTCCTAGCAAGGTTAAGGTCATGGTTATGCCTGGTTTTTATGTGCATGATAGAGTACTT
AGGTGTAAGGTAATATGCAGGTACAAAAATGTATCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400036996
PEP Infomation

pacid=37440825 transcript=PGSC0003DMT400055003 locus=PGSC0003DMG400021345 ID=PGSC0003DMT400055003.v4.03 annot-version=v4.03
Sequence

MIFESTFCVQSYEDEPLPGYKQLHLDHNPNYAELWDEYGFGGVGNGNNESVLSDYRKANS
TLKNGFTNSLINLEPHICPADDQRSVTSSCTDQVTTRKASPIARYIKSRRNSLGDLNSIS
SCNKCKPATISTEVDGGGSSTSKSGKNSNVIVPLTDSHVSVQSQPKSKGGMNLSWLFPKL
KKKNKVENSPNRTDQSDEVSQVLKDHIGMVSIETLKKELMEANESRDAALIEVLGMKSSL
GELKQKLEYLETYCEELKKALRQAIQATESPVSSKLRNFPKNGKSIDGDGENVIPVSDEV
MLEGFLQMVSESRLSVKQFCKTLIGQIEETDNLLTDNLNLLLQPYKLSLNSKYSKAVLYH
IESIINQSLFQDFENCVFQKNGSSKHLDPQHDRHAQFSSFVALRNLSWNEVLRKGTKYYS
EEFSKFCDQKMSCIIATLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPSLGILRVEE
NRTFDMHYMEDVFADRQRSQGPSKVKVMVMPGFYVHDRVLRCKVICRYKNVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400055003
Transcript Infomation

pacid=37440825 locus=PGSC0003DMG400021345 ID=PGSC0003DMT400055003.v4.03 annot-version=v4.03
Sequence

ATGATCTTTGAATCAACATTTTGTGTGCAGAGCTATGAAGATGAACCATTGCCAGGATAC
AAACAACTACACTTAGATCACAATCCAAACTATGCTGAACTTTGGGATGAATATGGATTT
GGAGGAGTAGGAAATGGTAACAATGAATCTGTTTTATCGGATTACAGGAAGGCGAATTCG
ACCTTAAAAAATGGATTTACGAATAGTCTGATCAACTTAGAACCCCACATTTGTCCGGCT
GATGATCAGAGATCGGTCACGAGCTCGTGTACTGATCAAGTCACTACGCGTAAAGCTTCT
CCCATCGCTCGTTACATCAAGTCTCGGAGAAACTCGTTAGGGGACTTGAACTCGATTTCA
TCTTGCAATAAGTGTAAGCCTGCAACAATTAGTACTGAGGTTGATGGTGGTGGTAGTAGT
ACAAGTAAGAGTGGGAAGAACTCGAATGTCATCGTGCCATTGACGGATTCACATGTTTCT
GTTCAATCGCAGCCAAAGAGTAAAGGCGGAATGAACTTGTCGTGGCTGTTCCCTAAGCTA
AAGAAGAAAAACAAGGTTGAAAATTCACCAAACCGAACAGATCAATCCGATGAGGTTTCT
CAGGTCTTAAAGGATCATATAGGGATGGTTTCAATCGAGACGTTGAAGAAAGAGCTAATG
GAAGCAAACGAGAGTAGAGATGCAGCGTTGATTGAAGTCTTGGGAATGAAGTCGTCTTTA
GGTGAGCTAAAGCAAAAGTTAGAGTACTTAGAAACTTACTGTGAAGAGCTGAAAAAGGCC
TTGAGGCAAGCAATTCAAGCTACAGAGTCCCCTGTATCCTCCAAGCTTAGAAATTTTCCT
AAAAACGGAAAATCCATCGATGGGGACGGAGAAAATGTGATCCCGGTTAGTGATGAGGTA
ATGCTAGAAGGGTTCTTACAGATGGTATCGGAGTCAAGATTATCGGTGAAACAGTTCTGC
AAGACTCTAATAGGACAGATTGAAGAAACAGACAATTTGTTAACTGATAACTTGAACCTT
TTGCTTCAACCTTACAAGCTATCTCTCAACTCGAAGTACTCGAAAGCAGTTCTATACCAC
ATTGAATCCATCATAAACCAATCACTTTTCCAAGACTTTGAAAACTGTGTGTTCCAAAAG
AATGGCTCATCAAAACACTTAGACCCTCAACATGATCGCCACGCTCAGTTCTCATCATTT
GTCGCGTTGAGGAACCTAAGTTGGAATGAGGTGTTGAGGAAGGGTACAAAGTACTATAGC
GAAGAGTTCAGTAAGTTCTGTGATCAGAAAATGAGTTGCATTATCGCAACGCTTAATTGG
ACAAGGCCATGGCCTGAACAACTCCTCCAAGCGTTCTTCGTTGCTGCTAAGTGCATTTGG
TTGCTGCATTTGTTAGCCTTTTCGTTCAATCCTTCTCTCGGGATTCTACGAGTGGAAGAG
AATAGAACTTTCGATATGCATTACATGGAGGACGTTTTCGCGGATAGACAAAGATCACAA
GGTCCTAGCAAGGTTAAGGTCATGGTTATGCCTGGTTTTTATGTGCATGATAGAGTACTT
AGGTGTAAGGTAATATGCAGGTACAAAAATGTATCATAG