Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054991
CDS Infomation

pacid=37437259 polypeptide=PGSC0003DMP400036988 locus=PGSC0003DMG400021342 ID=PGSC0003DMT400054991.v4.03 annot-version=v4.03
Sequence

ATGGGGAATACATGTATAGGACCCAAATTGGGTAACAATGGGTTCTTGCAATCAGTAACA
GCAGTTGTTTGGAAAACAAGACAACAAGAACATTTACCTCTTGCAAATAAAGGGGACTCA
AATTCCCACAAAACCCAAGAGCATTCATCCGTCGGATCGTCGAAGAAAGTAGATGGAAAT
GATACTAATAGATTTGGTGGTACTCAGAGTACTCCACCCCCACACCTTAAGATTAGTGGA
GATGATACTAATGAGAAGAATTCATCATCAAATGTTAATAATAAGCCAGTGGAAGGAGTG
AAACAGAATAAGCCTAGTCATGTTAAGCGAGTATCGAGCATTGGGCTTAAAATCGACTCT
GTTTTGGGAAGAAAAACTGGTAATTTGAAGGAGATTTGTAGTTTAGGGAGGAAGCTTGGA
CAAGGTCAATTCGGGACGACATATTTATGTGTGGACAAGGTACATGGAAAGGAGTTGGCG
TGTAAGTCCATTGCTAAGAGGAAGTTGAATACCGAGGAGGATGTCGAGGATGTAAGAAGG
GAGATTCAGATTATGCACCATTTGGCAGGGCACCCTAGTGTGGTACAAATAGTAGGGGCT
TATGAGGATGCTGTTGAAGTACATGTCGTGATGGAGCTTTGTGCGGGTGGGGAGCTTTTC
GACAGGATTTTACAGAGAGGACATTACAGTGAGAAGAAGGCAGCTGAACTCGCTAGGGTA
ATTGTAGGTGTCGTGGAAGCATGTCATTCCATGGGTGTCATGCATAGGGACCTCAAACCC
GAGAACTTTCTTTTTATCAACCAGGATGAAGATTCGCCCTTGAAGACAATCGACTTTGGG
TTATCAGTGTTCTTCAAGCCAGGTGAAATCTTCACTGATGTTGTCGGAAGCCCTTATTAT
GTTGCCCCAGAAGTGTTGCGGAAGCATTATGGTTTAGAATGTGATATATGGAGTGCTGGA
GTGATCATTTATATTTTACTAAGTGGAGTTCCCCCCTTCTGGGAAGAGACGGAGCAAGGA
ATATTTGAACAGGTTCTAAAAGGGGAACTTGACTTTGTATCAGAACCTTGGCCATCTATA
TCAGAAAGTGCAAAAGATCTTGTCAGAAAGATGCTTGTGAGAGATCCAAAAAAGAGGCTA
ACAGCTCATGAAGTACTTTGTCACCCATGGGTCCGTGTTGGCGGTGTAGCTCCAGATAAG
CCTCTTGATTCTGCTGTTCTGACTCGTCTCAATCAATTTTCTGCAATGAACAAATTAAAA
AAGATAGCAGTTAGAGTTATTGCTGAAAGCCTATCTGCAGAGGAAATTGCAGGACTCAAG
GAAATGTTCAAAATGCTAGATACCGATAATAGTGGAAATATTACGTTGGAGGAACTGAAG
AAAGGTTTGGAACGAGTAGGTGCCGATCTGAAGGATTCAGAAATAACTAGTTTAATGCAA
GCGGCAGATACTGATAATAGTGGTACCATTGACTACGGCGAGTTTATAGCAGCTATGCTC
CATCTAAATAAAATTCAGAAGGAAGATCACATGTATGCAGCTTTTTCTTATTTCGATCAA
GATGGTAGCGGATACATCACAAAGGACGAGCTCCAACAAGCTTGTGAGAAGTTCGGGATG
AGCAACATCCCCATCGAAGAACTTATGCGTGAAGTTGATCAAGATAATGATGGACGGATC
GATTACAATGAATTTGTAGCAATGATGCAAGACACCGGTTTTGGCGAAATGGGGAGCAGA
AGGAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400036988
PEP Infomation

pacid=37437259 transcript=PGSC0003DMT400054991 locus=PGSC0003DMG400021342 ID=PGSC0003DMT400054991.v4.03 annot-version=v4.03
Sequence

MGNTCIGPKLGNNGFLQSVTAVVWKTRQQEHLPLANKGDSNSHKTQEHSSVGSSKKVDGN
DTNRFGGTQSTPPPHLKISGDDTNEKNSSSNVNNKPVEGVKQNKPSHVKRVSSIGLKIDS
VLGRKTGNLKEICSLGRKLGQGQFGTTYLCVDKVHGKELACKSIAKRKLNTEEDVEDVRR
EIQIMHHLAGHPSVVQIVGAYEDAVEVHVVMELCAGGELFDRILQRGHYSEKKAAELARV
IVGVVEACHSMGVMHRDLKPENFLFINQDEDSPLKTIDFGLSVFFKPGEIFTDVVGSPYY
VAPEVLRKHYGLECDIWSAGVIIYILLSGVPPFWEETEQGIFEQVLKGELDFVSEPWPSI
SESAKDLVRKMLVRDPKKRLTAHEVLCHPWVRVGGVAPDKPLDSAVLTRLNQFSAMNKLK
KIAVRVIAESLSAEEIAGLKEMFKMLDTDNSGNITLEELKKGLERVGADLKDSEITSLMQ
AADTDNSGTIDYGEFIAAMLHLNKIQKEDHMYAAFSYFDQDGSGYITKDELQQACEKFGM
SNIPIEELMREVDQDNDGRIDYNEFVAMMQDTGFGEMGSRRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400054991
Transcript Infomation

pacid=37437259 locus=PGSC0003DMG400021342 ID=PGSC0003DMT400054991.v4.03 annot-version=v4.03
Sequence

ATGGGGAATACATGTATAGGACCCAAATTGGGTAACAATGGGTTCTTGCAATCAGTAACA
GCAGTTGTTTGGAAAACAAGACAACAAGAACATTTACCTCTTGCAAATAAAGGGGACTCA
AATTCCCACAAAACCCAAGAGCATTCATCCGTCGGATCGTCGAAGAAAGTAGATGGAAAT
GATACTAATAGATTTGGTGGTACTCAGAGTACTCCACCCCCACACCTTAAGATTAGTGGA
GATGATACTAATGAGAAGAATTCATCATCAAATGTTAATAATAAGCCAGTGGAAGGAGTG
AAACAGAATAAGCCTAGTCATGTTAAGCGAGTATCGAGCATTGGGCTTAAAATCGACTCT
GTTTTGGGAAGAAAAACTGGTAATTTGAAGGAGATTTGTAGTTTAGGGAGGAAGCTTGGA
CAAGGTCAATTCGGGACGACATATTTATGTGTGGACAAGGTACATGGAAAGGAGTTGGCG
TGTAAGTCCATTGCTAAGAGGAAGTTGAATACCGAGGAGGATGTCGAGGATGTAAGAAGG
GAGATTCAGATTATGCACCATTTGGCAGGGCACCCTAGTGTGGTACAAATAGTAGGGGCT
TATGAGGATGCTGTTGAAGTACATGTCGTGATGGAGCTTTGTGCGGGTGGGGAGCTTTTC
GACAGGATTTTACAGAGAGGACATTACAGTGAGAAGAAGGCAGCTGAACTCGCTAGGGTA
ATTGTAGGTGTCGTGGAAGCATGTCATTCCATGGGTGTCATGCATAGGGACCTCAAACCC
GAGAACTTTCTTTTTATCAACCAGGATGAAGATTCGCCCTTGAAGACAATCGACTTTGGG
TTATCAGTGTTCTTCAAGCCAGGTGAAATCTTCACTGATGTTGTCGGAAGCCCTTATTAT
GTTGCCCCAGAAGTGTTGCGGAAGCATTATGGTTTAGAATGTGATATATGGAGTGCTGGA
GTGATCATTTATATTTTACTAAGTGGAGTTCCCCCCTTCTGGGAAGAGACGGAGCAAGGA
ATATTTGAACAGGTTCTAAAAGGGGAACTTGACTTTGTATCAGAACCTTGGCCATCTATA
TCAGAAAGTGCAAAAGATCTTGTCAGAAAGATGCTTGTGAGAGATCCAAAAAAGAGGCTA
ACAGCTCATGAAGTACTTTGTCACCCATGGGTCCGTGTTGGCGGTGTAGCTCCAGATAAG
CCTCTTGATTCTGCTGTTCTGACTCGTCTCAATCAATTTTCTGCAATGAACAAATTAAAA
AAGATAGCAGTTAGAGTTATTGCTGAAAGCCTATCTGCAGAGGAAATTGCAGGACTCAAG
GAAATGTTCAAAATGCTAGATACCGATAATAGTGGAAATATTACGTTGGAGGAACTGAAG
AAAGGTTTGGAACGAGTAGGTGCCGATCTGAAGGATTCAGAAATAACTAGTTTAATGCAA
GCGGCAGATACTGATAATAGTGGTACCATTGACTACGGCGAGTTTATAGCAGCTATGCTC
CATCTAAATAAAATTCAGAAGGAAGATCACATGTATGCAGCTTTTTCTTATTTCGATCAA
GATGGTAGCGGATACATCACAAAGGACGAGCTCCAACAAGCTTGTGAGAAGTTCGGGATG
AGCAACATCCCCATCGAAGAACTTATGCGTGAAGTTGATCAAGATAATGATGGACGGATC
GATTACAATGAATTTGTAGCAATGATGCAAGACACCGGTTTTGGCGAAATGGGGAGCAGA
AGGAGGTAA