Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054965
CDS Infomation

pacid=37439102 polypeptide=PGSC0003DMP400036966 locus=PGSC0003DMG400021331 ID=PGSC0003DMT400054965.v4.03 annot-version=v4.03
Sequence

ATGAATGATCTTTTCTCAGGATCGTTCTCTCGTCATGGAGAGAACGATCATGATCAAGAT
TCTCATGGAATTGAAATGGGAGACACCGGTGGAGTCAACCTAGACAAGTTTTTCGAAGAC
GTAGAAGCTATTAAAGACGAGCTGAAAAACCTCGAAAAAATCTATGCTCAGCTTCAGAGC
TCTAATGAAAAGAGTAAGACCCTTCACAACGCGAAAGCTGTGAAGGATCTTAGGTCTAAA
ATGGATGATGATGTTTCCCTGGCCTTGAAAAAGGCCAAGTTTATTAAAGTTCGTTTGGAA
GCGTTGGATAGATCCAACGCTTCCAACAGAAGCCTCCCCGAGTGTGGCCCGGGGAGCTCC
TCTGATAGGACGAGGACGTCTGTTGTGAATGGATTGAGGAAGAAACTTCATGAATCTATG
AATCAGTTTAATGAGCTGAGACAAAAGATGGCGTCGGAATATAGAGAAACGGTTCAAAGA
AGGTATTATACTGTTACTGGAGAAAATCCTGATGAAACAGTTCTTGATACACTCATATCT
ACAGGTCAAAGTGAGACATTCTTACAAAAGGCAATACAAGAACAAGGAAGAGGACAAGTG
ATGGACACAATAATGGAGATTCAAGAAAGGCATGAAGCTGTAAAGGAAATAGAGAGGAAT
TTGAAAGAACTTCATCAAGTTTTCTTGGACATGGCTGTTTTAGTGGAATCTCAAGGTGAA
CAACTTGATGATATTGAGAGCCAAGTGAATAGGGCTAATTCATATGTTAGAGGAGGTGCT
CAACAATTACAAGTGGCAAGAAAACACCAAAAGAATACAAGAAAATGGACTTGTTTTGCT
ATTATTCTTTTGCTTATCATCATCTTGATAGTGGTTCTTTCTATTCAGCCATGGAAGAAA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400036966
PEP Infomation

pacid=37439102 transcript=PGSC0003DMT400054965 locus=PGSC0003DMG400021331 ID=PGSC0003DMT400054965.v4.03 annot-version=v4.03
Sequence

MNDLFSGSFSRHGENDHDQDSHGIEMGDTGGVNLDKFFEDVEAIKDELKNLEKIYAQLQS
SNEKSKTLHNAKAVKDLRSKMDDDVSLALKKAKFIKVRLEALDRSNASNRSLPECGPGSS
SDRTRTSVVNGLRKKLHESMNQFNELRQKMASEYRETVQRRYYTVTGENPDETVLDTLIS
TGQSETFLQKAIQEQGRGQVMDTIMEIQERHEAVKEIERNLKELHQVFLDMAVLVESQGE
QLDDIESQVNRANSYVRGGAQQLQVARKHQKNTRKWTCFAIILLLIIILIVVLSIQPWKK
*

Transcript Sequence

Transcript ID

PGSC0003DMT400054965
Transcript Infomation

pacid=37439102 locus=PGSC0003DMG400021331 ID=PGSC0003DMT400054965.v4.03 annot-version=v4.03
Sequence

ATGAATGATCTTTTCTCAGGATCGTTCTCTCGTCATGGAGAGAACGATCATGATCAAGAT
TCTCATGGAATTGAAATGGGAGACACCGGTGGAGTCAACCTAGACAAGTTTTTCGAAGAC
GTAGAAGCTATTAAAGACGAGCTGAAAAACCTCGAAAAAATCTATGCTCAGCTTCAGAGC
TCTAATGAAAAGAGTAAGACCCTTCACAACGCGAAAGCTGTGAAGGATCTTAGGTCTAAA
ATGGATGATGATGTTTCCCTGGCCTTGAAAAAGGCCAAGTTTATTAAAGTTCGTTTGGAA
GCGTTGGATAGATCCAACGCTTCCAACAGAAGCCTCCCCGAGTGTGGCCCGGGGAGCTCC
TCTGATAGGACGAGGACGTCTGTTGTGAATGGATTGAGGAAGAAACTTCATGAATCTATG
AATCAGTTTAATGAGCTGAGACAAAAGATGGCGTCGGAATATAGAGAAACGGTTCAAAGA
AGGTATTATACTGTTACTGGAGAAAATCCTGATGAAACAGTTCTTGATACACTCATATCT
ACAGGTCAAAGTGAGACATTCTTACAAAAGGCAATACAAGAACAAGGAAGAGGACAAGTG
ATGGACACAATAATGGAGATTCAAGAAAGGCATGAAGCTGTAAAGGAAATAGAGAGGAAT
TTGAAAGAACTTCATCAAGTTTTCTTGGACATGGCTGTTTTAGTGGAATCTCAAGGTGAA
CAACTTGATGATATTGAGAGCCAAGTGAATAGGGCTAATTCATATGTTAGAGGAGGTGCT
CAACAATTACAAGTGGCAAGAAAACACCAAAAGAATACAAGAAAATGGACTTGTTTTGCT
ATTATTCTTTTGCTTATCATCATCTTGATAGTGGTTCTTTCTATTCAGCCATGGAAGAAA
TGA