Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054952
CDS Infomation

pacid=37436991 polypeptide=PGSC0003DMP400036962 locus=PGSC0003DMG400021329 ID=PGSC0003DMT400054952.v4.03 annot-version=v4.03
Sequence

ATGAAACTCAGAATCAGATGCTTCGAAACCAAAGAAACCATCAAAATCGATGTACAATCT
TCATCCTGCACTCTTCAAGAACTCAAAAATCGAATCTCTCAAGCATTACCATCATCATCA
ACACCAAATTCCGTTCATCTTTCTCTCAATCGAAAGGACGAACTTCAATCTTCTGAAGAA
GATACGCTTCAATCGATTGGAATTACCTCAGGTGATCTCATCTTCTTCACTCAAAATCCA
ATTGGGTTTTCAATTTCAACTGAAACCCATATCCCCAAATTGAAAAAATCGGACACCCAA
ATCGTCCAAGAATCTGAAATAGTGAAAAAACTGGACACCCAAATTGTTCAAGAATCTGAA
ACAGTGAAAGAAATGGACACCCAAATCGACCAATCGGAACCCCACGAGACGAAAACTCAA
AATTCTATACCTGGGGGTGAGGAAATGGAGGAGTTTATGGAGGTAGATGATAATGGAGAT
TACAGTGATGTGAATTTTACGAAATCGTTTTCTGTACCTGGGTTTTTGAGGAAAGTGTTT
ACAGAGGAGCTAAACGATGACGATGGTAGCCGTGACCATAAGCTGTTGGTGGTTGCTGTT
CATGCTGTTTTTGTAGAATCTGGGTTTGTTCTTCTTGACCCTATTACGTTTACTGAAGTT
AGTGTATCTCAATTTTTGAAATATTGGTCTTCGGGATCTCGAAAGACACTGTTTTACACC
TTACCTGAGGTTATTGATCATGTAAAAGGAGGTAATTGTAATGTGATTCACTGTATTGAG
TTAAAGTATCAGTCTTTAGGGAAGTTCTTTATTGCTCATGGGTCATTATCAGGTGGGGGG
TCGGTTTCCACGTTTAGAGTGACGTTAAACGAAGATCAATTGGTTCCGTTTTTGAATGTT
GTGTGGGCTAATTGTGGATTGAATGAGGTAGTAGATGGGGATTTTGGAGAGAAGGAAGTG
TTTGTGTTTTGGAGGAATGTAAAGGATGGGCTTGTATTGCCATTGTTGATTGATTTGTGT
GAAAAGTCTGGTTTGGTGCTTCCACCGTGCTTTACACGACTTCCGACTGACCTTAAGTTG
AAGATTTTGGAGTCACTTCCGGGTGTTGAGATAGCGAAAGTGAGTTGTTTGAGCTCTGAA
TTGCGATATTTGGGTTCAAGTGATGATTTGTGGAAGAAGAAATATGCGGGGCAGTTTGGT
GATGGTGCGATATCGGGAGAAGGAGGACATTGGAAAGAGAAGTTTGTTAAGTCTTGGGAG
AGTAGGAAGAGAAGGAAAGTGATTAATAGAAGAAGAGTGGTTGATGGGTTGCGAATTTTA
GGGGGGCGTCATCCATTTCCGGTACCTTGGATGCCACATGTAATAGGTGGAGATTATGAT
CTTTTCCCTCCACAATTTGATAATACTGGAAATCCGTTAGGGCGGGCACCACCTTCTCGA
TTGCTTCATCCGTGGTCAAACCATGTACGTCGTTGTCATCTTGGAGGACATAGGAGCAAC
TTCCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036962
PEP Infomation

pacid=37436991 transcript=PGSC0003DMT400054952 locus=PGSC0003DMG400021329 ID=PGSC0003DMT400054952.v4.03 annot-version=v4.03
Sequence

MKLRIRCFETKETIKIDVQSSSCTLQELKNRISQALPSSSTPNSVHLSLNRKDELQSSEE
DTLQSIGITSGDLIFFTQNPIGFSISTETHIPKLKKSDTQIVQESEIVKKLDTQIVQESE
TVKEMDTQIDQSEPHETKTQNSIPGGEEMEEFMEVDDNGDYSDVNFTKSFSVPGFLRKVF
TEELNDDDGSRDHKLLVVAVHAVFVESGFVLLDPITFTEVSVSQFLKYWSSGSRKTLFYT
LPEVIDHVKGGNCNVIHCIELKYQSLGKFFIAHGSLSGGGSVSTFRVTLNEDQLVPFLNV
VWANCGLNEVVDGDFGEKEVFVFWRNVKDGLVLPLLIDLCEKSGLVLPPCFTRLPTDLKL
KILESLPGVEIAKVSCLSSELRYLGSSDDLWKKKYAGQFGDGAISGEGGHWKEKFVKSWE
SRKRRKVINRRRVVDGLRILGGRHPFPVPWMPHVIGGDYDLFPPQFDNTGNPLGRAPPSR
LLHPWSNHVRRCHLGGHRSNFP*

Transcript Sequence

Transcript ID

PGSC0003DMT400054952
Transcript Infomation

pacid=37436991 locus=PGSC0003DMG400021329 ID=PGSC0003DMT400054952.v4.03 annot-version=v4.03
Sequence

ATGAAACTCAGAATCAGATGCTTCGAAACCAAAGAAACCATCAAAATCGATGTACAATCT
TCATCCTGCACTCTTCAAGAACTCAAAAATCGAATCTCTCAAGCATTACCATCATCATCA
ACACCAAATTCCGTTCATCTTTCTCTCAATCGAAAGGACGAACTTCAATCTTCTGAAGAA
GATACGCTTCAATCGATTGGAATTACCTCAGGTGATCTCATCTTCTTCACTCAAAATCCA
ATTGGGTTTTCAATTTCAACTGAAACCCATATCCCCAAATTGAAAAAATCGGACACCCAA
ATCGTCCAAGAATCTGAAATAGTGAAAAAACTGGACACCCAAATTGTTCAAGAATCTGAA
ACAGTGAAAGAAATGGACACCCAAATCGACCAATCGGAACCCCACGAGACGAAAACTCAA
AATTCTATACCTGGGGGTGAGGAAATGGAGGAGTTTATGGAGGTAGATGATAATGGAGAT
TACAGTGATGTGAATTTTACGAAATCGTTTTCTGTACCTGGGTTTTTGAGGAAAGTGTTT
ACAGAGGAGCTAAACGATGACGATGGTAGCCGTGACCATAAGCTGTTGGTGGTTGCTGTT
CATGCTGTTTTTGTAGAATCTGGGTTTGTTCTTCTTGACCCTATTACGTTTACTGAAGTT
AGTGTATCTCAATTTTTGAAATATTGGTCTTCGGGATCTCGAAAGACACTGTTTTACACC
TTACCTGAGGTTATTGATCATGTAAAAGGAGGTAATTGTAATGTGATTCACTGTATTGAG
TTAAAGTATCAGTCTTTAGGGAAGTTCTTTATTGCTCATGGGTCATTATCAGGTGGGGGG
TCGGTTTCCACGTTTAGAGTGACGTTAAACGAAGATCAATTGGTTCCGTTTTTGAATGTT
GTGTGGGCTAATTGTGGATTGAATGAGGTAGTAGATGGGGATTTTGGAGAGAAGGAAGTG
TTTGTGTTTTGGAGGAATGTAAAGGATGGGCTTGTATTGCCATTGTTGATTGATTTGTGT
GAAAAGTCTGGTTTGGTGCTTCCACCGTGCTTTACACGACTTCCGACTGACCTTAAGTTG
AAGATTTTGGAGTCACTTCCGGGTGTTGAGATAGCGAAAGTGAGTTGTTTGAGCTCTGAA
TTGCGATATTTGGGTTCAAGTGATGATTTGTGGAAGAAGAAATATGCGGGGCAGTTTGGT
GATGGTGCGATATCGGGAGAAGGAGGACATTGGAAAGAGAAGTTTGTTAAGTCTTGGGAG
AGTAGGAAGAGAAGGAAAGTGATTAATAGAAGAAGAGTGGTTGATGGGTTGCGAATTTTA
GGGGGGCGTCATCCATTTCCGGTACCTTGGATGCCACATGTAATAGGTGGAGATTATGAT
CTTTTCCCTCCACAATTTGATAATACTGGAAATCCGTTAGGGCGGGCACCACCTTCTCGA
TTGCTTCATCCGTGGTCAAACCATGTACGTCGTTGTCATCTTGGAGGACATAGGAGCAAC
TTCCCTTGA