Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054945
CDS Infomation

pacid=37441092 polypeptide=PGSC0003DMP400036956 locus=PGSC0003DMG400021323 ID=PGSC0003DMT400054945.v4.03 annot-version=v4.03
Sequence

ATGGCATCTTATTTTCATGGAAATTCAGAAATACAAGAAGGAAATGATGGATTACAAACT
CTAATACTAATGAATCCTGGATATGTTGGATTTTCTGAAACACAACATCACCACGCGCCG
CCGCCGCCAGGTGGCAGCAGCAACAACATAGTTTTCTTCAACTCCAATCCTCTTGGAAAT
TCAATAAACTTATCTCACGCGCCACCACCTCCGCCACCGCCACAACAACATTTCGTCGGT
ATACCTCTCGCCACCGCCGCCTTCACCGCCCCATCCCAAGACTCCGGTAACAACAACAAC
AACGAGTCAATCTCCGCCCTTCACGGCTTCCTAGCTCGATCGTCTCAGTACGGGTTTTAC
AACCCGGCTAACGACATCACGGCGGCGCGTGAGGTCACACGCGCTCATCATCAGCAGCAG
CAAGGGCTTTCACTTAGCCTGTCCTCATCCCAGCAGCCTGGGTTTGGGAACTTCACGGCG
GCGCGTGAGATTGTTTCTTCGCCTACGCGTTCGGCTTCGGCTTCCGGGATACAACAACAA
CAACAGCAACAACAAAGTATTAGTAGTGTGCCTTTGAGTTCTAAGTACATGAAGGCTGCA
CAAGAGCTACTTGATGAAGTTGTAAATGTTGGAAAATCAATGAGAAGTACTAATAGTACT
GAAGTTGTTGTTAATAATGATGTCAAGAAATCGAAGATTATGACCGATATGGATGGACAG
ATAGATGGAGGAGCAGACAAAGACGGAACTCCAACAACTGAGCTAAGTACCGCAGAGAGG
CAAGAAATTCAAATGAAGAAAGCAAAACTTGTTAACATGCTTGACGAGGTGGAGCAGAGG
TATAGACATTATCATCACCAAATGCAGTCAGTGATACACTGGTTGGAGCAAGCTGCTGGT
ATTGGATCAGCAAGAACATATACAGCATTGGCTTTGCAGACGATTTCGAAGCAATTTAGG
TGTCTTAAGGACGCGATAATTGGTCAAATACGATCAGCAGGCAAGACGTTAGGCGAAGAA
GATAGTTTGGGAGGGAAGATTGAAGGTTCAAGGCTTAAATTTGTTGACAATCAGCTAAGA
CAGCAAAGGGCTTTGCAACAATTGGGAATGATCCAGCATAATGCTTGGAGACCTCAGAGA
GGATTGCCCGAACGAGCTGTTTCTGTTCTTCGCGCTTGGCTTTTTGAACATTTCCTCCAT
CCCTATCCCAAGGATTCAGACAAAATGATGCTAGCAAAACAAACAGGGCTAACTAGGAGT
CAGGTGTCGAATTGGTTCATCAATGCTCGAGTTCGTCTTTGGAAGCCAATGGTGGAAGAG
ATGTACTTGGAAGAGATAAAAGAACAGAACGGATTGGGTCAAGAAAAGACGAGCAAATTA
GGCGAACAGAACGAAGATTCAACAACATCAAGATCCATTGCTACACAAGACAAAAGCCCT
GGTTCAGATAGCCAAAACAAGAGTTTTGTCTCAAAACAGGACAATCATTTGCCCCAACAC
AACCCTGCTTCACCAATGCCGATGTCCAACACCACTTCCATACCTCCTATCGGTATGAAC
ATCCGTAATCAGTCTGCTGGTTTCAACCTCATTGGATCACCAGAGATCGAAAGCATCAAC
ATTACTCAAGGGAGTCCAAAGAAACCAAGGAACAACGAGATGTTGCATTCACCAAACAGC
ATTCCATCCATCAACATTGATGTAAAGCCTAACGAGCAACAAATGTCGATGAAGTTTGGT
GATGATAGGCAAGACAGAGATGGATTCTCACTAATGGGAGGACCGATGAACTTCATGGGA
GGATTCGGAGCCTATCCCATTGGAGAAATTGCTCGGTTTAGCACCGAGCAATTCTCAGCA
CCATACTCAACCAGTGGCACAGTTTCACTCACTCTTGGCCTACCACATAACGAAAACCTC
TCAATGTCAGCAACACACCACAGTTTCCTTCCAATTCCAACACAAAACATCCAAATTGGA
AGTGAACCAAATCATGAGTTTGGTAGCTTAAACACACCAACATCAGCTCACTCAACATCA
AGCGTCTACGAAAATTTCAACATTCAGAACAGAAAGAGGTTCGCCGCACCCTTGTTACCA
GATTTTGTTGCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036956
PEP Infomation

pacid=37441092 transcript=PGSC0003DMT400054945 locus=PGSC0003DMG400021323 ID=PGSC0003DMT400054945.v4.03 annot-version=v4.03
Sequence

MASYFHGNSEIQEGNDGLQTLILMNPGYVGFSETQHHHAPPPPGGSSNNIVFFNSNPLGN
SINLSHAPPPPPPPQQHFVGIPLATAAFTAPSQDSGNNNNNESISALHGFLARSSQYGFY
NPANDITAAREVTRAHHQQQQGLSLSLSSSQQPGFGNFTAAREIVSSPTRSASASGIQQQ
QQQQQSISSVPLSSKYMKAAQELLDEVVNVGKSMRSTNSTEVVVNNDVKKSKIMTDMDGQ
IDGGADKDGTPTTELSTAERQEIQMKKAKLVNMLDEVEQRYRHYHHQMQSVIHWLEQAAG
IGSARTYTALALQTISKQFRCLKDAIIGQIRSAGKTLGEEDSLGGKIEGSRLKFVDNQLR
QQRALQQLGMIQHNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKMMLAKQTGLTRS
QVSNWFINARVRLWKPMVEEMYLEEIKEQNGLGQEKTSKLGEQNEDSTTSRSIATQDKSP
GSDSQNKSFVSKQDNHLPQHNPASPMPMSNTTSIPPIGMNIRNQSAGFNLIGSPEIESIN
ITQGSPKKPRNNEMLHSPNSIPSINIDVKPNEQQMSMKFGDDRQDRDGFSLMGGPMNFMG
GFGAYPIGEIARFSTEQFSAPYSTSGTVSLTLGLPHNENLSMSATHHSFLPIPTQNIQIG
SEPNHEFGSLNTPTSAHSTSSVYENFNIQNRKRFAAPLLPDFVA*

Transcript Sequence

Transcript ID

PGSC0003DMT400054945
Transcript Infomation

pacid=37441092 locus=PGSC0003DMG400021323 ID=PGSC0003DMT400054945.v4.03 annot-version=v4.03
Sequence

ATGGCATCTTATTTTCATGGAAATTCAGAAATACAAGAAGGAAATGATGGATTACAAACT
CTAATACTAATGAATCCTGGATATGTTGGATTTTCTGAAACACAACATCACCACGCGCCG
CCGCCGCCAGGTGGCAGCAGCAACAACATAGTTTTCTTCAACTCCAATCCTCTTGGAAAT
TCAATAAACTTATCTCACGCGCCACCACCTCCGCCACCGCCACAACAACATTTCGTCGGT
ATACCTCTCGCCACCGCCGCCTTCACCGCCCCATCCCAAGACTCCGGTAACAACAACAAC
AACGAGTCAATCTCCGCCCTTCACGGCTTCCTAGCTCGATCGTCTCAGTACGGGTTTTAC
AACCCGGCTAACGACATCACGGCGGCGCGTGAGGTCACACGCGCTCATCATCAGCAGCAG
CAAGGGCTTTCACTTAGCCTGTCCTCATCCCAGCAGCCTGGGTTTGGGAACTTCACGGCG
GCGCGTGAGATTGTTTCTTCGCCTACGCGTTCGGCTTCGGCTTCCGGGATACAACAACAA
CAACAGCAACAACAAAGTATTAGTAGTGTGCCTTTGAGTTCTAAGTACATGAAGGCTGCA
CAAGAGCTACTTGATGAAGTTGTAAATGTTGGAAAATCAATGAGAAGTACTAATAGTACT
GAAGTTGTTGTTAATAATGATGTCAAGAAATCGAAGATTATGACCGATATGGATGGACAG
ATAGATGGAGGAGCAGACAAAGACGGAACTCCAACAACTGAGCTAAGTACCGCAGAGAGG
CAAGAAATTCAAATGAAGAAAGCAAAACTTGTTAACATGCTTGACGAGGTGGAGCAGAGG
TATAGACATTATCATCACCAAATGCAGTCAGTGATACACTGGTTGGAGCAAGCTGCTGGT
ATTGGATCAGCAAGAACATATACAGCATTGGCTTTGCAGACGATTTCGAAGCAATTTAGG
TGTCTTAAGGACGCGATAATTGGTCAAATACGATCAGCAGGCAAGACGTTAGGCGAAGAA
GATAGTTTGGGAGGGAAGATTGAAGGTTCAAGGCTTAAATTTGTTGACAATCAGCTAAGA
CAGCAAAGGGCTTTGCAACAATTGGGAATGATCCAGCATAATGCTTGGAGACCTCAGAGA
GGATTGCCCGAACGAGCTGTTTCTGTTCTTCGCGCTTGGCTTTTTGAACATTTCCTCCAT
CCCTATCCCAAGGATTCAGACAAAATGATGCTAGCAAAACAAACAGGGCTAACTAGGAGT
CAGGTGTCGAATTGGTTCATCAATGCTCGAGTTCGTCTTTGGAAGCCAATGGTGGAAGAG
ATGTACTTGGAAGAGATAAAAGAACAGAACGGATTGGGTCAAGAAAAGACGAGCAAATTA
GGCGAACAGAACGAAGATTCAACAACATCAAGATCCATTGCTACACAAGACAAAAGCCCT
GGTTCAGATAGCCAAAACAAGAGTTTTGTCTCAAAACAGGACAATCATTTGCCCCAACAC
AACCCTGCTTCACCAATGCCGATGTCCAACACCACTTCCATACCTCCTATCGGTATGAAC
ATCCGTAATCAGTCTGCTGGTTTCAACCTCATTGGATCACCAGAGATCGAAAGCATCAAC
ATTACTCAAGGGAGTCCAAAGAAACCAAGGAACAACGAGATGTTGCATTCACCAAACAGC
ATTCCATCCATCAACATTGATGTAAAGCCTAACGAGCAACAAATGTCGATGAAGTTTGGT
GATGATAGGCAAGACAGAGATGGATTCTCACTAATGGGAGGACCGATGAACTTCATGGGA
GGATTCGGAGCCTATCCCATTGGAGAAATTGCTCGGTTTAGCACCGAGCAATTCTCAGCA
CCATACTCAACCAGTGGCACAGTTTCACTCACTCTTGGCCTACCACATAACGAAAACCTC
TCAATGTCAGCAACACACCACAGTTTCCTTCCAATTCCAACACAAAACATCCAAATTGGA
AGTGAACCAAATCATGAGTTTGGTAGCTTAAACACACCAACATCAGCTCACTCAACATCA
AGCGTCTACGAAAATTTCAACATTCAGAACAGAAAGAGGTTCGCCGCACCCTTGTTACCA
GATTTTGTTGCCTGA