Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054944
CDS Infomation

pacid=37440292 polypeptide=PGSC0003DMP400036955 locus=PGSC0003DMG400021322 ID=PGSC0003DMT400054944.v4.03 annot-version=v4.03
Sequence

ATGCAGGGAGTTCCGCCACTGGACGTGCCAGAGTTGTTAGCTTATTTGGTTAGACAGTCA
AGCCCATTTTTGGATCAAATTGGCATAAGAAGAGATATCTCCGATAAGATCGTAGAGAGT
TTATGCGGCAAACGGCGGAACAAACTTTTATTACGTGCTTTACCTGAAGGAGATTCTTCC
CTGATCGAAGGCGATAATATGAATGATGAACTAGAACTACGAATTGCCAGTGTGCTACAA
AGTACTGGTCATCATTATGAAGGTGGGTTTTGGAGCAATTCTACAAAGCAAAACATATCA
GATGGTAAAAGACATGTAGCCATAGTCACAACTGCTAGCCTACCTTGGATGACTGGAACA
GCTGTCAATCCTCTCTTCCGAGCGGCTTATTTGGCCAAGTCTGAAAGGCAGAATGTTACA
CTCTTGGTTCCATGGCTATGTAAATCGGACCAAGAACTAGTTTATCCAAACAATCTTACA
TTTAGTTCACCAGAAGAGCAGGAGCTCTACATACGGAATTGGCTTGAGGAAAGAGTCGGT
TTCAAGACTGATTTCAAGATTTCGTTTTATCCTGGAAAGTTCTCCAAGGAAAGGCGAAGT
ATACTACCAGCTGGAGATACTACTCAGTTTATCCCATCAAGGGATGCTGATATTGCAATC
TTAGAGGAGCCAGAACATCTAAATTGGTACCATCATGGCAAACGCTGGACTGATAAGTTT
AACCATGTCGTTGGTATTGTTCACACAAATTATTTGGAGTATATCAAAAGAGAGAAGAAT
GGGGCTCTTCAAGCTTTCCTTGTGAAACACGTAAATAATTGGGTCACAAGAGCGCATTGT
GACAAGGTGCTTCGCCTTTCTGCTGCTACACAGGATTTACCCAGGTCTGTGGTCTGCAAT
GTTCATGGTGTAAATCCGAAGTTTCTAAAAATTGGAGAAAAAATGGCTGCCGAAAGACAA
AGCGGTCAGCAAGTTTTCTCTAAAGGTGCATACTTCTTAGGGAAAATGGTTTGGGCAAAG
GGTTACAGGGAGTTAATAGACCTTTTAGCGAAGCACAAAAGTGACCTTGATGGTTTTAAT
ATGGATGTGTTTGGCAACGGGGAAGATGCTCATGAAGTGCAGACAACAGCTAGGACGTTA
AATTTGAATGTCAACTTCATGAAAGGCAGAGACCACGCGGATGATTCTCTTCATAGTTAT
AAAGTCTTCATAAATCCTAGTATCAGTGATGTACTCTGTACAGCTACAGCTGAGGCACTC
GCTATGGGGAAATTTGTAGTTTGTGCAGATCATCCGTCTAATGAGTTCTTCCAGGCATTT
CCTAACTGCTTGACTTATAAGACATCAGAAGACTTTGTAGAAAAGGTTAAAGAGGCAATG
ACCGGTGAGCCTCAGCCTCTCACTCCCGAGGAACAATATAAGCTTTCGTGGGAAGCTGCA
ACACAGAGATTCATCGAATATTCTGATCTCGATAAGGTTTTGACTAGTGAAAAAGGCGGT
GACAGGAGAAAAAGCAGGATCAAGGGCATAGGAAAATCAGTTTCCATGCCAAATCTCGGA
GGGATGGTTGATGGAAGTCTGGCATTTGCACAATATTGTCTCACAGGGAACGAGTTCGTG
AGGTGGTGTTCAGGTGCAACACCGGGAACACGAGATTATGACAAGCAGCATTGTGAAGAT
CTCCATCTCTTACCTCCCCAGGTAGAAAACCCAATTTATGGCTGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400036955
PEP Infomation

pacid=37440292 transcript=PGSC0003DMT400054944 locus=PGSC0003DMG400021322 ID=PGSC0003DMT400054944.v4.03 annot-version=v4.03
Sequence

MQGVPPLDVPELLAYLVRQSSPFLDQIGIRRDISDKIVESLCGKRRNKLLLRALPEGDSS
LIEGDNMNDELELRIASVLQSTGHHYEGGFWSNSTKQNISDGKRHVAIVTTASLPWMTGT
AVNPLFRAAYLAKSERQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQELYIRNWLEERVG
FKTDFKISFYPGKFSKERRSILPAGDTTQFIPSRDADIAILEEPEHLNWYHHGKRWTDKF
NHVVGIVHTNYLEYIKREKNGALQAFLVKHVNNWVTRAHCDKVLRLSAATQDLPRSVVCN
VHGVNPKFLKIGEKMAAERQSGQQVFSKGAYFLGKMVWAKGYRELIDLLAKHKSDLDGFN
MDVFGNGEDAHEVQTTARTLNLNVNFMKGRDHADDSLHSYKVFINPSISDVLCTATAEAL
AMGKFVVCADHPSNEFFQAFPNCLTYKTSEDFVEKVKEAMTGEPQPLTPEEQYKLSWEAA
TQRFIEYSDLDKVLTSEKGGDRRKSRIKGIGKSVSMPNLGGMVDGSLAFAQYCLTGNEFV
RWCSGATPGTRDYDKQHCEDLHLLPPQVENPIYGW*

Transcript Sequence

Transcript ID

PGSC0003DMT400054944
Transcript Infomation

pacid=37440292 locus=PGSC0003DMG400021322 ID=PGSC0003DMT400054944.v4.03 annot-version=v4.03
Sequence

ATGCAGGGAGTTCCGCCACTGGACGTGCCAGAGTTGTTAGCTTATTTGGTTAGACAGTCA
AGCCCATTTTTGGATCAAATTGGCATAAGAAGAGATATCTCCGATAAGATCGTAGAGAGT
TTATGCGGCAAACGGCGGAACAAACTTTTATTACGTGCTTTACCTGAAGGAGATTCTTCC
CTGATCGAAGGCGATAATATGAATGATGAACTAGAACTACGAATTGCCAGTGTGCTACAA
AGTACTGGTCATCATTATGAAGGTGGGTTTTGGAGCAATTCTACAAAGCAAAACATATCA
GATGGTAAAAGACATGTAGCCATAGTCACAACTGCTAGCCTACCTTGGATGACTGGAACA
GCTGTCAATCCTCTCTTCCGAGCGGCTTATTTGGCCAAGTCTGAAAGGCAGAATGTTACA
CTCTTGGTTCCATGGCTATGTAAATCGGACCAAGAACTAGTTTATCCAAACAATCTTACA
TTTAGTTCACCAGAAGAGCAGGAGCTCTACATACGGAATTGGCTTGAGGAAAGAGTCGGT
TTCAAGACTGATTTCAAGATTTCGTTTTATCCTGGAAAGTTCTCCAAGGAAAGGCGAAGT
ATACTACCAGCTGGAGATACTACTCAGTTTATCCCATCAAGGGATGCTGATATTGCAATC
TTAGAGGAGCCAGAACATCTAAATTGGTACCATCATGGCAAACGCTGGACTGATAAGTTT
AACCATGTCGTTGGTATTGTTCACACAAATTATTTGGAGTATATCAAAAGAGAGAAGAAT
GGGGCTCTTCAAGCTTTCCTTGTGAAACACGTAAATAATTGGGTCACAAGAGCGCATTGT
GACAAGGTGCTTCGCCTTTCTGCTGCTACACAGGATTTACCCAGGTCTGTGGTCTGCAAT
GTTCATGGTGTAAATCCGAAGTTTCTAAAAATTGGAGAAAAAATGGCTGCCGAAAGACAA
AGCGGTCAGCAAGTTTTCTCTAAAGGTGCATACTTCTTAGGGAAAATGGTTTGGGCAAAG
GGTTACAGGGAGTTAATAGACCTTTTAGCGAAGCACAAAAGTGACCTTGATGGTTTTAAT
ATGGATGTGTTTGGCAACGGGGAAGATGCTCATGAAGTGCAGACAACAGCTAGGACGTTA
AATTTGAATGTCAACTTCATGAAAGGCAGAGACCACGCGGATGATTCTCTTCATAGTTAT
AAAGTCTTCATAAATCCTAGTATCAGTGATGTACTCTGTACAGCTACAGCTGAGGCACTC
GCTATGGGGAAATTTGTAGTTTGTGCAGATCATCCGTCTAATGAGTTCTTCCAGGCATTT
CCTAACTGCTTGACTTATAAGACATCAGAAGACTTTGTAGAAAAGGTTAAAGAGGCAATG
ACCGGTGAGCCTCAGCCTCTCACTCCCGAGGAACAATATAAGCTTTCGTGGGAAGCTGCA
ACACAGAGATTCATCGAATATTCTGATCTCGATAAGGTTTTGACTAGTGAAAAAGGCGGT
GACAGGAGAAAAAGCAGGATCAAGGGCATAGGAAAATCAGTTTCCATGCCAAATCTCGGA
GGGATGGTTGATGGAAGTCTGGCATTTGCACAATATTGTCTCACAGGGAACGAGTTCGTG
AGGTGGTGTTCAGGTGCAACACCGGGAACACGAGATTATGACAAGCAGCATTGTGAAGAT
CTCCATCTCTTACCTCCCCAGGTAGAAAACCCAATTTATGGCTGGTAG