Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054863
CDS Infomation

pacid=37477051 polypeptide=PGSC0003DMP400036899 locus=PGSC0003DMG400021296 ID=PGSC0003DMT400054863.v4.03 annot-version=v4.03
Sequence

ATGGAAATTCCAACCGAAACCCCAATAAAGAAACCAAAGCGATTGACATCCGTTGTGTGG
AACCATTTTGAAAGAGTTCGAAAGGCAGATATCTGTTATGCCGTCTGTGTGCATTGCAAA
AAGAAGCTTAGTGGATCAAGTAACAGCGGAACAACTCATCTGAGGAATCATTTGTTGCGG
TGTCTAAAAAGATCCAACTATGATGTTACCCAAATACTTGCAGCGAAGAGAAAGAAAAAA
GACCCTACTCTTGCAGTTGTCACCTATGAAGAAGGACAAAGGAAAGAAGAAACCATTAGT
CCTGTGACAACCTTTAAGTTTGATCCAGAGGTAAAGAAAGAGGAAGTTAACGTGCCTATC
AACCTTGGCAGTGTTAGATTTGATCAAGAGCGGAGCCGTCTGGATCTTGCCCGTATGATT
ATGTTACATGGTTATCCTTTAGCCATGGTTGACCATATTGGATTCAAAATATTTGTCAAG
AATTTACAGCCACAATTTGAGGTTTTGACTAATAGTGCTGTTGAACTAGATTGTATGACT
ATTTATGCAAAAGAGAAACAGAAGATGTATGAAGCGATCCATAACTTGCATGGAAGAATT
AGTCTTTCTGCTGATGTTTGGGATTCATCGGAAAATGCACGGTATATGTGCTTGACTGCT
TTTTACATTGATGAAGACTGGAAGCTTCAGAAGAAAATGCTGAATTTCATCACACTGGAC
CCTTCTCACACAGATGACATACTTTCAGAAGTTGTTATAAAAAGTTTGACAGACTGGGCC
ATTGATCGTAAGTTGTTTTCTATGACTTTCGATCATTGTACGGGCTATGAAGAACTGATT
TTTAGGATCAAAGACTGGCTTTCTCAAAACAGGCCTCTGTTAAAGAATGGTGAATTGTTT
GATGTGCGCTGTGCAGTACAGTTAATGAAATCAATTGTTTCCGATGTCATGGAAGCAATT
CGAGATGTGACCCACAAGGTCCGAGAAAGCATAAGGCATGTTAAAAGTTCACAAGTAACC
CTAGGAAAATTCAATGAGATTGCTCAGCAAGCTGCGATTAGTGGTGAGAGACCTTTGATT
CTTGACTGCGGACAGCAGTGGAGTTCAACATACTTAATGCTTGAAGCTGCCTTAGACTAT
AGGGGAGCCTTCTGTCTACTAGAAGAGCATGACCCTACCTACACTAGTGCCTTGTCTGAA
ACAGAGTGGGATCATGCTAGTGCCGTTGCTGGCTATGTGAAACTTTTTGTTGAAGTTACT
AATGTTTTCACAACAAATAAGTATTCAACTGCCAACATATATTTCCCAGAAATATGTGAT
ATTCACATCCAGTTGATTGAATGGTGTAAGAATCCTGATAATTTTCTAAGTGATATAGCA
CTGAAGATGAAAGAAAAGTTTGACAGATACTGGAGCAAGTGCAGTTTGACTTTGGCAATA
GCAGCAATACTGGATCCAAGGTTCAAGATGAAGTTGGTGGAGTATTACTATCCTCAGATT
TATGATTCTGATGCGCCAAATCAGATCAAAGCAGTATCTGATGCCATAAGGGAGCTTTCC
AATGAGTATGCTATGGGCTCATCTTCGCTTGATCCAGATACGGCTGGTGCTTCTGGCAGC
TTAGCCAGTACCACTATTGGCACGAGGGACAGACTTAGGGGTTTCGACAAGTTTCTCCAT
GAAACTTCACAAAGCCACAACATGACATCAGATCTTGACAAATACTTGGAAGAGCCAGTC
TTTCCTCGCAATTATGATTTCAGCATATTGAATTGGTGGAAAGTTCACACACCAAGGTAC
CCTATATTATCGATGATGGCACGTGATATCTTGGGAGTTCCTGCATCCACTCTTGGACCA
GAGTTGGCATTCAATAACAGAGGCAGGGTGCTTGATCATCATCGCAGTTCACTGAATCCA
GGTGCTAGAGAAGCTCTGATATGTGGTCAAGACTGGTTGCGCATGGAATCTGAAGAATAT
AACTCACCTCACATCTACACTGCTGTGCCACTTACGGTGGAATCAAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400036899
PEP Infomation

pacid=37477051 transcript=PGSC0003DMT400054863 locus=PGSC0003DMG400021296 ID=PGSC0003DMT400054863.v4.03 annot-version=v4.03
Sequence

MEIPTETPIKKPKRLTSVVWNHFERVRKADICYAVCVHCKKKLSGSSNSGTTHLRNHLLR
CLKRSNYDVTQILAAKRKKKDPTLAVVTYEEGQRKEETISPVTTFKFDPEVKKEEVNVPI
NLGSVRFDQERSRLDLARMIMLHGYPLAMVDHIGFKIFVKNLQPQFEVLTNSAVELDCMT
IYAKEKQKMYEAIHNLHGRISLSADVWDSSENARYMCLTAFYIDEDWKLQKKMLNFITLD
PSHTDDILSEVVIKSLTDWAIDRKLFSMTFDHCTGYEELIFRIKDWLSQNRPLLKNGELF
DVRCAVQLMKSIVSDVMEAIRDVTHKVRESIRHVKSSQVTLGKFNEIAQQAAISGERPLI
LDCGQQWSSTYLMLEAALDYRGAFCLLEEHDPTYTSALSETEWDHASAVAGYVKLFVEVT
NVFTTNKYSTANIYFPEICDIHIQLIEWCKNPDNFLSDIALKMKEKFDRYWSKCSLTLAI
AAILDPRFKMKLVEYYYPQIYDSDAPNQIKAVSDAIRELSNEYAMGSSSLDPDTAGASGS
LASTTIGTRDRLRGFDKFLHETSQSHNMTSDLDKYLEEPVFPRNYDFSILNWWKVHTPRY
PILSMMARDILGVPASTLGPELAFNNRGRVLDHHRSSLNPGAREALICGQDWLRMESEEY
NSPHIYTAVPLTVESK*

Transcript Sequence

Transcript ID

PGSC0003DMT400054863
Transcript Infomation

pacid=37477051 locus=PGSC0003DMG400021296 ID=PGSC0003DMT400054863.v4.03 annot-version=v4.03
Sequence

ATGGAAATTCCAACCGAAACCCCAATAAAGAAACCAAAGCGATTGACATCCGTTGTGTGG
AACCATTTTGAAAGAGTTCGAAAGGCAGATATCTGTTATGCCGTCTGTGTGCATTGCAAA
AAGAAGCTTAGTGGATCAAGTAACAGCGGAACAACTCATCTGAGGAATCATTTGTTGCGG
TGTCTAAAAAGATCCAACTATGATGTTACCCAAATACTTGCAGCGAAGAGAAAGAAAAAA
GACCCTACTCTTGCAGTTGTCACCTATGAAGAAGGACAAAGGAAAGAAGAAACCATTAGT
CCTGTGACAACCTTTAAGTTTGATCCAGAGGTAAAGAAAGAGGAAGTTAACGTGCCTATC
AACCTTGGCAGTGTTAGATTTGATCAAGAGCGGAGCCGTCTGGATCTTGCCCGTATGATT
ATGTTACATGGTTATCCTTTAGCCATGGTTGACCATATTGGATTCAAAATATTTGTCAAG
AATTTACAGCCACAATTTGAGGTTTTGACTAATAGTGCTGTTGAACTAGATTGTATGACT
ATTTATGCAAAAGAGAAACAGAAGATGTATGAAGCGATCCATAACTTGCATGGAAGAATT
AGTCTTTCTGCTGATGTTTGGGATTCATCGGAAAATGCACGGTATATGTGCTTGACTGCT
TTTTACATTGATGAAGACTGGAAGCTTCAGAAGAAAATGCTGAATTTCATCACACTGGAC
CCTTCTCACACAGATGACATACTTTCAGAAGTTGTTATAAAAAGTTTGACAGACTGGGCC
ATTGATCGTAAGTTGTTTTCTATGACTTTCGATCATTGTACGGGCTATGAAGAACTGATT
TTTAGGATCAAAGACTGGCTTTCTCAAAACAGGCCTCTGTTAAAGAATGGTGAATTGTTT
GATGTGCGCTGTGCAGTACAGTTAATGAAATCAATTGTTTCCGATGTCATGGAAGCAATT
CGAGATGTGACCCACAAGGTCCGAGAAAGCATAAGGCATGTTAAAAGTTCACAAGTAACC
CTAGGAAAATTCAATGAGATTGCTCAGCAAGCTGCGATTAGTGGTGAGAGACCTTTGATT
CTTGACTGCGGACAGCAGTGGAGTTCAACATACTTAATGCTTGAAGCTGCCTTAGACTAT
AGGGGAGCCTTCTGTCTACTAGAAGAGCATGACCCTACCTACACTAGTGCCTTGTCTGAA
ACAGAGTGGGATCATGCTAGTGCCGTTGCTGGCTATGTGAAACTTTTTGTTGAAGTTACT
AATGTTTTCACAACAAATAAGTATTCAACTGCCAACATATATTTCCCAGAAATATGTGAT
ATTCACATCCAGTTGATTGAATGGTGTAAGAATCCTGATAATTTTCTAAGTGATATAGCA
CTGAAGATGAAAGAAAAGTTTGACAGATACTGGAGCAAGTGCAGTTTGACTTTGGCAATA
GCAGCAATACTGGATCCAAGGTTCAAGATGAAGTTGGTGGAGTATTACTATCCTCAGATT
TATGATTCTGATGCGCCAAATCAGATCAAAGCAGTATCTGATGCCATAAGGGAGCTTTCC
AATGAGTATGCTATGGGCTCATCTTCGCTTGATCCAGATACGGCTGGTGCTTCTGGCAGC
TTAGCCAGTACCACTATTGGCACGAGGGACAGACTTAGGGGTTTCGACAAGTTTCTCCAT
GAAACTTCACAAAGCCACAACATGACATCAGATCTTGACAAATACTTGGAAGAGCCAGTC
TTTCCTCGCAATTATGATTTCAGCATATTGAATTGGTGGAAAGTTCACACACCAAGGTAC
CCTATATTATCGATGATGGCACGTGATATCTTGGGAGTTCCTGCATCCACTCTTGGACCA
GAGTTGGCATTCAATAACAGAGGCAGGGTGCTTGATCATCATCGCAGTTCACTGAATCCA
GGTGCTAGAGAAGCTCTGATATGTGGTCAAGACTGGTTGCGCATGGAATCTGAAGAATAT
AACTCACCTCACATCTACACTGCTGTGCCACTTACGGTGGAATCAAAGTAG