Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054791
CDS Infomation

pacid=37477198 polypeptide=PGSC0003DMP400036854 locus=PGSC0003DMG400021264 ID=PGSC0003DMT400054791.v4.03 annot-version=v4.03
Sequence

ATGACGACTCGGAATTTGGAGAAATTGGCATCCATTGATGCCCAACTGAGGGCTTTGGTT
CCTGGTAAGGTTTCTGAGGATGACAAGCTGGTTGAGTATGATGCTTTGCTTTTGGATAGT
TTCCTCGATATCCTTCAGGATTTGCATGGAGAGGATCTCAAGGAAACGGTCCAAGAGTGT
TATGAACTTTCTGCGGAGTACGAAGGAAAGCATGATCCAAAGAAGCTGGAGGAGCTTGGA
AATGTGTTGACAAGTTTGGATCCAGGGGATTCCATTGTCATTGCTAAAGCTTTCTCTCAC
ATGCTTAATTTGGCCAACTTGGCCGAGGAGGTGCAGATTGCCTACCGTCGACGACAAAAG
TTGAAAAAGGGGGACTTTGCTGATGAGAACAATGCAACAACTGAATCTGATATTGAAGAA
ACTTTCAAGAAACTTGTAGAGGAGTTGAAAAAGTCTCCTCAAGAAGTTTTCGATGCTCTG
AAGAATCAGACGGTGGATCTAGTCTTAACTGCTCATCCTACTCAATCTGTCCGAAGATCT
TTGCTTCAAAAGCATGGAAGGATCCGAGATTGCTTGGCTCAGCTGTATGCTAAAGACATT
ACACCCGATGATAAACAAGAGCTTGATGAGGCGTTACAGAGGGAGATTCAAGCTGCTTTC
CGCACTGATGAGATTCGGAGGACTGCTCCAACTCCACAAGATGAAATGAGAGCTGGAATG
AGCTACTTTCATGAGACTATTTGGAAGGGTGTTCCACAGTTCCTTCGCCGTGTTGACACA
GCTCTTAAAAACATAGGGATTAACGAACGACTTCCTTACAATGCTCCTCTTATTCAATTT
TCCTCCTGGATGGGTGGTGATCGGGATGGCAATCCAAGAGTGACTCCCGAGGTCACAAGA
GATGTCTGTTTATTAGCAAGAATGATGGCAGCGAACTTATACTATTCGCAAATAGAGGAG
CTCATGTTTGAGTTATCTATGTGGCGTTGCAACGATGAAGTTCGTATTCGAGCAGATGAA
CTTTACAGGTCCTCAAGGCAAGACACCAAGCACTACATAGAATTCTGGAAAACAATTCCG
CCAAGTGAACCATATCGTGTTATTCTTGGCGATGTGAGAGATAAGCTGTATCAGACACGT
GAGCGTACTCGCCAAGTGTTAGCCCATGGAATCTCTGATATTCCTGAGGATGCAACTTAC
AATAGCATTGAGCAGTTCTTGGAACCTCTTGAGCTCTGCTACAAATCTCTTTGTGATTGT
GGTGATCGTCCCATTGCCGATGGAAGCCTTCTGGATTTTCTAAGACAAGTTTCTACCTTT
GGACTCTCATTTGTGAGACTTGACATAAGACAAGAGTCAGACCGTCACACTGACGTCCTT
GATGCCATTACTCAGCATTTGGAAATTGGTTCATATCGTGAGTGGTCTGAAGAACGTAGA
CAGGAGTGGCTTCTTTCTGAACTCGGCGGCAAGAGACCTTTATTTGGACCCGATCTTCCA
AAAACAGAAGAAATTGCTGATGTCTTGGATACACTCCATGTCATAGCAGAACTTCCATCA
GACTGCTTCGGGGCATACATCATCTCAATGGCCACCGCACCATCTGATGTGCTTGCAGTT
GAGCTCCTACAACGTGAATGCCATGTGAAGCAACCTTTACGAGTGGTTCCACTTTTTGAG
AAATTGGATGATCTGGAGGCTGCTCCTGCTGCTGTTGCACGTCTCTTCTCGATTGAGTGG
TACAGAAACCGGATTAAAGGCAAACAAGAGGTCATGATTGGGTATTCGGACTCTGGTAAG
GATGCTGGTCGGTTTTCAGCAGCCTGGCAGCTATATAAGGCTCAAGAGGAGCTTGTAAAA
GTTGCCAAAGAACATGGTGTGAAGCTAATTATGTTCCATGGTAGAGGTGGTACAGTTGGA
AGAGGAGGTGGCCCCACCCATCTTGCTATATTGTCTCAACCACCTGACACTATTAACGGA
TCTCTCCGTGTCACAGTTCAGGGCGAGGTTATTGAGCAATCGTTTGGGGAGGAACACTTG
TGTTTTAGAACTCTCCAACGTTTCACTGCTGCTACCCTTGAACATGGTATGCATCCACCA
GTCTCTCCAAAACCCGAATGGCGTGCACTTATGGATGAAATTGCAGTTATTGCTACAGAG
AAGTATAGGTCAATTGTTTTCAAAGAACCCCGATTTGTTGAGTATTTCCGCTTGGCCACA
CCTGAGCTAGAGTATGGTCGAATGAACATTGGCAGCCGTCCATCAAAGCGTAAACCCAGT
GGAGGCATAGAATCACTCAGAGCTATTCCATGGATCTTCGCCTGGACCCAGACAAGGTTT
CATCTCCCGGTCTGGCTTGGCTTTGGGGCAGCATTTAGGTATGCTGTTGACAAGGATATC
AAAAACCTACGCATGTTTCACGAGATGTACAATGCATGGCCATTCTTTAGGGTAACTATT
GACTTGGTTGAGATGGTGTTCGCCAAGGGTGACCCGGGTATTGCAGCCCTGTACGACAAG
CTTCTTGTTTCAGAAGATCTGTGGTCCTTCGGTGAGCTTTTGAGGTCCAAGTATGAAGAG
ACAAGAACCCTCCTGCTCCAGATTGCTGGACACAAGGATCTTCTGGAGGGAGACCCCTAC
CTTAAACAACGACTCAGGCTGCGTGATTCCTACATCACAACCTTAAACGTGTTGCAAGCC
TACACTCTAAAGCGTATACGTGATCCAAACTACCATGTCAAGCTGAGGCCTCATATTTCC
AAGGAATACATGGAATCAAAATCAGCTGCTGAACTAGTGACGCTGAATCCGACAAGTGAA
TATGCCCCTGGATTGGAGGACACACTCATCTTGACCATGAAGGGTATTGCTGCTGGAATG
CAGAACACTGGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400036854
PEP Infomation

pacid=37477198 transcript=PGSC0003DMT400054791 locus=PGSC0003DMG400021264 ID=PGSC0003DMT400054791.v4.03 annot-version=v4.03
Sequence

MTTRNLEKLASIDAQLRALVPGKVSEDDKLVEYDALLLDSFLDILQDLHGEDLKETVQEC
YELSAEYEGKHDPKKLEELGNVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRQK
LKKGDFADENNATTESDIEETFKKLVEELKKSPQEVFDALKNQTVDLVLTAHPTQSVRRS
LLQKHGRIRDCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTAPTPQDEMRAGM
SYFHETIWKGVPQFLRRVDTALKNIGINERLPYNAPLIQFSSWMGGDRDGNPRVTPEVTR
DVCLLARMMAANLYYSQIEELMFELSMWRCNDEVRIRADELYRSSRQDTKHYIEFWKTIP
PSEPYRVILGDVRDKLYQTRERTRQVLAHGISDIPEDATYNSIEQFLEPLELCYKSLCDC
GDRPIADGSLLDFLRQVSTFGLSFVRLDIRQESDRHTDVLDAITQHLEIGSYREWSEERR
QEWLLSELGGKRPLFGPDLPKTEEIADVLDTLHVIAELPSDCFGAYIISMATAPSDVLAV
ELLQRECHVKQPLRVVPLFEKLDDLEAAPAAVARLFSIEWYRNRIKGKQEVMIGYSDSGK
DAGRFSAAWQLYKAQEELVKVAKEHGVKLIMFHGRGGTVGRGGGPTHLAILSQPPDTING
SLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRALMDEIAVIATE
KYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRF
HLPVWLGFGAAFRYAVDKDIKNLRMFHEMYNAWPFFRVTIDLVEMVFAKGDPGIAALYDK
LLVSEDLWSFGELLRSKYEETRTLLLQIAGHKDLLEGDPYLKQRLRLRDSYITTLNVLQA
YTLKRIRDPNYHVKLRPHISKEYMESKSAAELVTLNPTSEYAPGLEDTLILTMKGIAAGM
QNTG*

Transcript Sequence

Transcript ID

PGSC0003DMT400054791
Transcript Infomation

pacid=37477198 locus=PGSC0003DMG400021264 ID=PGSC0003DMT400054791.v4.03 annot-version=v4.03
Sequence

ATGACGACTCGGAATTTGGAGAAATTGGCATCCATTGATGCCCAACTGAGGGCTTTGGTT
CCTGGTAAGGTTTCTGAGGATGACAAGCTGGTTGAGTATGATGCTTTGCTTTTGGATAGT
TTCCTCGATATCCTTCAGGATTTGCATGGAGAGGATCTCAAGGAAACGGTCCAAGAGTGT
TATGAACTTTCTGCGGAGTACGAAGGAAAGCATGATCCAAAGAAGCTGGAGGAGCTTGGA
AATGTGTTGACAAGTTTGGATCCAGGGGATTCCATTGTCATTGCTAAAGCTTTCTCTCAC
ATGCTTAATTTGGCCAACTTGGCCGAGGAGGTGCAGATTGCCTACCGTCGACGACAAAAG
TTGAAAAAGGGGGACTTTGCTGATGAGAACAATGCAACAACTGAATCTGATATTGAAGAA
ACTTTCAAGAAACTTGTAGAGGAGTTGAAAAAGTCTCCTCAAGAAGTTTTCGATGCTCTG
AAGAATCAGACGGTGGATCTAGTCTTAACTGCTCATCCTACTCAATCTGTCCGAAGATCT
TTGCTTCAAAAGCATGGAAGGATCCGAGATTGCTTGGCTCAGCTGTATGCTAAAGACATT
ACACCCGATGATAAACAAGAGCTTGATGAGGCGTTACAGAGGGAGATTCAAGCTGCTTTC
CGCACTGATGAGATTCGGAGGACTGCTCCAACTCCACAAGATGAAATGAGAGCTGGAATG
AGCTACTTTCATGAGACTATTTGGAAGGGTGTTCCACAGTTCCTTCGCCGTGTTGACACA
GCTCTTAAAAACATAGGGATTAACGAACGACTTCCTTACAATGCTCCTCTTATTCAATTT
TCCTCCTGGATGGGTGGTGATCGGGATGGCAATCCAAGAGTGACTCCCGAGGTCACAAGA
GATGTCTGTTTATTAGCAAGAATGATGGCAGCGAACTTATACTATTCGCAAATAGAGGAG
CTCATGTTTGAGTTATCTATGTGGCGTTGCAACGATGAAGTTCGTATTCGAGCAGATGAA
CTTTACAGGTCCTCAAGGCAAGACACCAAGCACTACATAGAATTCTGGAAAACAATTCCG
CCAAGTGAACCATATCGTGTTATTCTTGGCGATGTGAGAGATAAGCTGTATCAGACACGT
GAGCGTACTCGCCAAGTGTTAGCCCATGGAATCTCTGATATTCCTGAGGATGCAACTTAC
AATAGCATTGAGCAGTTCTTGGAACCTCTTGAGCTCTGCTACAAATCTCTTTGTGATTGT
GGTGATCGTCCCATTGCCGATGGAAGCCTTCTGGATTTTCTAAGACAAGTTTCTACCTTT
GGACTCTCATTTGTGAGACTTGACATAAGACAAGAGTCAGACCGTCACACTGACGTCCTT
GATGCCATTACTCAGCATTTGGAAATTGGTTCATATCGTGAGTGGTCTGAAGAACGTAGA
CAGGAGTGGCTTCTTTCTGAACTCGGCGGCAAGAGACCTTTATTTGGACCCGATCTTCCA
AAAACAGAAGAAATTGCTGATGTCTTGGATACACTCCATGTCATAGCAGAACTTCCATCA
GACTGCTTCGGGGCATACATCATCTCAATGGCCACCGCACCATCTGATGTGCTTGCAGTT
GAGCTCCTACAACGTGAATGCCATGTGAAGCAACCTTTACGAGTGGTTCCACTTTTTGAG
AAATTGGATGATCTGGAGGCTGCTCCTGCTGCTGTTGCACGTCTCTTCTCGATTGAGTGG
TACAGAAACCGGATTAAAGGCAAACAAGAGGTCATGATTGGGTATTCGGACTCTGGTAAG
GATGCTGGTCGGTTTTCAGCAGCCTGGCAGCTATATAAGGCTCAAGAGGAGCTTGTAAAA
GTTGCCAAAGAACATGGTGTGAAGCTAATTATGTTCCATGGTAGAGGTGGTACAGTTGGA
AGAGGAGGTGGCCCCACCCATCTTGCTATATTGTCTCAACCACCTGACACTATTAACGGA
TCTCTCCGTGTCACAGTTCAGGGCGAGGTTATTGAGCAATCGTTTGGGGAGGAACACTTG
TGTTTTAGAACTCTCCAACGTTTCACTGCTGCTACCCTTGAACATGGTATGCATCCACCA
GTCTCTCCAAAACCCGAATGGCGTGCACTTATGGATGAAATTGCAGTTATTGCTACAGAG
AAGTATAGGTCAATTGTTTTCAAAGAACCCCGATTTGTTGAGTATTTCCGCTTGGCCACA
CCTGAGCTAGAGTATGGTCGAATGAACATTGGCAGCCGTCCATCAAAGCGTAAACCCAGT
GGAGGCATAGAATCACTCAGAGCTATTCCATGGATCTTCGCCTGGACCCAGACAAGGTTT
CATCTCCCGGTCTGGCTTGGCTTTGGGGCAGCATTTAGGTATGCTGTTGACAAGGATATC
AAAAACCTACGCATGTTTCACGAGATGTACAATGCATGGCCATTCTTTAGGGTAACTATT
GACTTGGTTGAGATGGTGTTCGCCAAGGGTGACCCGGGTATTGCAGCCCTGTACGACAAG
CTTCTTGTTTCAGAAGATCTGTGGTCCTTCGGTGAGCTTTTGAGGTCCAAGTATGAAGAG
ACAAGAACCCTCCTGCTCCAGATTGCTGGACACAAGGATCTTCTGGAGGGAGACCCCTAC
CTTAAACAACGACTCAGGCTGCGTGATTCCTACATCACAACCTTAAACGTGTTGCAAGCC
TACACTCTAAAGCGTATACGTGATCCAAACTACCATGTCAAGCTGAGGCCTCATATTTCC
AAGGAATACATGGAATCAAAATCAGCTGCTGAACTAGTGACGCTGAATCCGACAAGTGAA
TATGCCCCTGGATTGGAGGACACACTCATCTTGACCATGAAGGGTATTGCTGCTGGAATG
CAGAACACTGGCTAA