Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054788
CDS Infomation

pacid=37480129 polypeptide=PGSC0003DMP400036851 locus=PGSC0003DMG401021263 ID=PGSC0003DMT400054788.v4.03 annot-version=v4.03
Sequence

ATGGCGGCCTCCTCTTCCATTTTCTTAGTTTATTTCTTTCTACCCTTATTTTCCACAGCA
ACCCTCCACAGTTCTTCTCTTTATAGATCCCAACTCATCACTCAGCAAGAATCTTTACCC
AAAAGTGCCACCCCCATAACTTTTTTTGAAGTCACAAAACCTATAAAATTACCCAAAACC
AAACCTTGTTCATACCTAATTCTTGAACATGATTTTGGTTCCACTTACAGAAAACCCCCA
ATTCTTGCTAATTACACACCCCCTTTAAATTGCCCATCTCAGAAATTTTCCAAGATTGTG
CTGGAATGGAGAGCAACTTGTAAAGGTAGGCAATTTGATAGAATTTTTGGTGTTTGGGTT
AGTGGGGTTGAGATTTTCAGAAGCTGCACTGCTGAACCAACTAAAAATGGGATCTTTTGG
ACTGTCCAGAAGGACATTACTAGATATTCTTCTTTGCTTTTGAAAAATCAAATCTTTGCT
GTTTATTTAGGGAATATTGTTGATAGTACATATACAGGTGTGTACCATGTGGAAATTTTT
GTTCATTTTTATCCTGCTGAAGTGAAATTGGGTAAATTTGATTCTGGGGCTGATTTGATT
GTTCCCATTTCAAGAAATATGCATTTGAATGATGGGTTGTGGTTTGAGATTGAAAATTCA
ACAGATGTACAGTCGAAGGATTTCAAGATTCCCCCAAATGTGTATAGGGCTGTATTGGAA
GTTTATGTTTCATTTCATGAGAATGATGAGTCTTGGTATGGGAATCCACCTAATGAGTAT
ATCAGTTCGAATAATCTTACTATCGCGGGGAATGGAGCTTTCAGGGAGGTGGTGGTTAGT
TTGGATGAAATGGTAGTTGGTGTAGTTTGGCCTTTTACTGTGATCTATACTGGGGGTGTT
AATCCCCTCTTTTGGAGACCGATTAGTGGAATTGGATCGTTCGATCTTCCTTCTTATGAC
ATTGAATTTACCCCGTTGTTAGGAAAGATTTTAGATGGAAATAGTCATAAGATTTCATTT
AGAGTCACGGATGCTCTGAACGTGTGGTATGTTGATGCAAATTTGCATCTTTGGTTGGAC
GGGAAAAGTAAGAAAACGGAAGGGAAGTTGTTGAGATACAGCTTATTGCCCCTTTCTTTA
TCAGTGCTGACCAATTTTACAGGTTTTGATGGATCCTTTATCACAAACGCTAGTAGGTCC
ATCACATTGACCGGAATGGTGAAGTCATCTTATGGAACAATCACTACTAAGTCGTCTCAA
AGTTTAAGTTATAGCAACTATATGGTAATGGGGAATGAAGGGAACTTGCAAATAGTGGAT
CAGATAATCGAATTCAATGATACTGTTTATGCCACGACGCCATCTTCTTCTGTTCACTCG
CTTGAGTCCTTCAAAAAGTATCTGTTCAAGTGGTATTCTGACAATGTAGATCAAGGAAAC
CAAAGTTATGCCTCGATATCAAACTTGACATTGGGATTAGAGGACAAGAGGGTAAAGGCT
TCCAAGTACGGATCCTCGACCAGCTCTGTTAATAATTTGCAAAAAGCGCAGGGCAATATG
CTTGTAAAAGGCCAGTTAGTAGTAAAAGGACTTGGGAGTACCCAACAAGTATATAAATAT
AACGATGATTTGTACTGCTACTCCAGGAACATAAGCAGCTCAAATTACACGATACTTTAC
GATAAGGTAAGCAATAGCTGCAGCAAGAGTACTTGGTCTCGTTTGCCTTTGAAGATTGGC
AAAAGGCTGTCTCTTCCTAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036851
PEP Infomation

pacid=37480129 transcript=PGSC0003DMT400054788 locus=PGSC0003DMG401021263 ID=PGSC0003DMT400054788.v4.03 annot-version=v4.03
Sequence

MAASSSIFLVYFFLPLFSTATLHSSSLYRSQLITQQESLPKSATPITFFEVTKPIKLPKT
KPCSYLILEHDFGSTYRKPPILANYTPPLNCPSQKFSKIVLEWRATCKGRQFDRIFGVWV
SGVEIFRSCTAEPTKNGIFWTVQKDITRYSSLLLKNQIFAVYLGNIVDSTYTGVYHVEIF
VHFYPAEVKLGKFDSGADLIVPISRNMHLNDGLWFEIENSTDVQSKDFKIPPNVYRAVLE
VYVSFHENDESWYGNPPNEYISSNNLTIAGNGAFREVVVSLDEMVVGVVWPFTVIYTGGV
NPLFWRPISGIGSFDLPSYDIEFTPLLGKILDGNSHKISFRVTDALNVWYVDANLHLWLD
GKSKKTEGKLLRYSLLPLSLSVLTNFTGFDGSFITNASRSITLTGMVKSSYGTITTKSSQ
SLSYSNYMVMGNEGNLQIVDQIIEFNDTVYATTPSSSVHSLESFKKYLFKWYSDNVDQGN
QSYASISNLTLGLEDKRVKASKYGSSTSSVNNLQKAQGNMLVKGQLVVKGLGSTQQVYKY
NDDLYCYSRNISSSNYTILYDKVSNSCSKSTWSRLPLKIGKRLSLPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400054788
Transcript Infomation

pacid=37480129 locus=PGSC0003DMG401021263 ID=PGSC0003DMT400054788.v4.03 annot-version=v4.03
Sequence

ATGGCGGCCTCCTCTTCCATTTTCTTAGTTTATTTCTTTCTACCCTTATTTTCCACAGCA
ACCCTCCACAGTTCTTCTCTTTATAGATCCCAACTCATCACTCAGCAAGAATCTTTACCC
AAAAGTGCCACCCCCATAACTTTTTTTGAAGTCACAAAACCTATAAAATTACCCAAAACC
AAACCTTGTTCATACCTAATTCTTGAACATGATTTTGGTTCCACTTACAGAAAACCCCCA
ATTCTTGCTAATTACACACCCCCTTTAAATTGCCCATCTCAGAAATTTTCCAAGATTGTG
CTGGAATGGAGAGCAACTTGTAAAGGTAGGCAATTTGATAGAATTTTTGGTGTTTGGGTT
AGTGGGGTTGAGATTTTCAGAAGCTGCACTGCTGAACCAACTAAAAATGGGATCTTTTGG
ACTGTCCAGAAGGACATTACTAGATATTCTTCTTTGCTTTTGAAAAATCAAATCTTTGCT
GTTTATTTAGGGAATATTGTTGATAGTACATATACAGGTGTGTACCATGTGGAAATTTTT
GTTCATTTTTATCCTGCTGAAGTGAAATTGGGTAAATTTGATTCTGGGGCTGATTTGATT
GTTCCCATTTCAAGAAATATGCATTTGAATGATGGGTTGTGGTTTGAGATTGAAAATTCA
ACAGATGTACAGTCGAAGGATTTCAAGATTCCCCCAAATGTGTATAGGGCTGTATTGGAA
GTTTATGTTTCATTTCATGAGAATGATGAGTCTTGGTATGGGAATCCACCTAATGAGTAT
ATCAGTTCGAATAATCTTACTATCGCGGGGAATGGAGCTTTCAGGGAGGTGGTGGTTAGT
TTGGATGAAATGGTAGTTGGTGTAGTTTGGCCTTTTACTGTGATCTATACTGGGGGTGTT
AATCCCCTCTTTTGGAGACCGATTAGTGGAATTGGATCGTTCGATCTTCCTTCTTATGAC
ATTGAATTTACCCCGTTGTTAGGAAAGATTTTAGATGGAAATAGTCATAAGATTTCATTT
AGAGTCACGGATGCTCTGAACGTGTGGTATGTTGATGCAAATTTGCATCTTTGGTTGGAC
GGGAAAAGTAAGAAAACGGAAGGGAAGTTGTTGAGATACAGCTTATTGCCCCTTTCTTTA
TCAGTGCTGACCAATTTTACAGGTTTTGATGGATCCTTTATCACAAACGCTAGTAGGTCC
ATCACATTGACCGGAATGGTGAAGTCATCTTATGGAACAATCACTACTAAGTCGTCTCAA
AGTTTAAGTTATAGCAACTATATGGTAATGGGGAATGAAGGGAACTTGCAAATAGTGGAT
CAGATAATCGAATTCAATGATACTGTTTATGCCACGACGCCATCTTCTTCTGTTCACTCG
CTTGAGTCCTTCAAAAAGTATCTGTTCAAGTGGTATTCTGACAATGTAGATCAAGGAAAC
CAAAGTTATGCCTCGATATCAAACTTGACATTGGGATTAGAGGACAAGAGGGTAAAGGCT
TCCAAGTACGGATCCTCGACCAGCTCTGTTAATAATTTGCAAAAAGCGCAGGGCAATATG
CTTGTAAAAGGCCAGTTAGTAGTAAAAGGACTTGGGAGTACCCAACAAGTATATAAATAT
AACGATGATTTGTACTGCTACTCCAGGAACATAAGCAGCTCAAATTACACGATACTTTAC
GATAAGGTAAGCAATAGCTGCAGCAAGAGTACTTGGTCTCGTTTGCCTTTGAAGATTGGC
AAAAGGCTGTCTCTTCCTAGTTGA