Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054764
CDS Infomation

pacid=37479562 polypeptide=PGSC0003DMP400036836 locus=PGSC0003DMG400021259 ID=PGSC0003DMT400054764.v4.03 annot-version=v4.03
Sequence

ATGACAATAACTAATTTGAACGCACCGTCACCCGAGGAGATTGTCCTCCCATCGGCACCG
GCACCAACTCCGACTCCGGCACCAGCACTAACTCCGGCATTGGCACCAGCACCAACTCCG
TCACCGGGACTAACTCCGGCACCGGCACCAACTCCGGCACCGGCGCCAACATTGCTTGAA
CAAAAGGACAATGCAATGAACAAGTCTTGTGGAAAGATAATCAATTGTAAAGAAGCGAAA
AATCAAGTGTTGTTCTCCGTTCCGATGATCGTCGTGAACGGTTGTTTCTACTTCATCAGC
CTCGTCTCCGTCATGTTCGCCGGACACCTCGGGAAACTCGAGCTTGCTTCATCGAATCTT
GCTAATTCATGGGCCATGGTTACTGGTTTCTCTTTCATGGTCGGACTAAGTGGTGCACTT
GAGACATTATGTGGCCAAGGATACGGCGCGAAAATGTTTAGGATGCTAGGGATACATCTT
CAAACATCAAGCATCATATCATTCTTCTTTTCTGTTGTTGTTTCTGTCATCTGGTGGTAT
TCGGATCGAATTCTGATTTTACTTCATCAAGAACCTGCCATAGCACATGAAGCAGGGGTG
TTCTTGAAGTTCCTCATACCTGGATTGATTGCATATGCTTTCTTGCAAAACATTGTGAGG
TTTCTTCAAGCTCAATCGATCATATTACCTTTAGCTTGCATCGCGGTTGCAGCTCTAGTT
GTCCACATTGGCATTGCATATGCTCTGGTTCATTGGACACATCTTGCTTACAAAGGAGCA
GCGTTAGCAGTATCGATTTCATTTTGGCTCACATTCATTACGTTGAGTCTATACGTGCTT
TTCTCCAAGAAATTTAGTCATATAAGGCCCGAAGGTCTCTCATCCGAGCCACTTCAACAT
CTTCTTTCAAACTTGAAGTTGGCTTTGCCCTCTGCAGGCATGGTGTGCTTGGAGTATTGG
GCATTTGAGATTCTTGTGTTATTAGCTGGTTTGATGCCAAACGCGGAAACAACTACTTCT
GTCGTTGCAATGTGTGTAAATACAGAAACCATAGCCTACATGATATCTTATGGCCTCAGT
GCAGCTGCAAGCACAAGGGTGTCAAACGAGATAGGAGCAGGAAATATCCGCAAAGCTAAA
CAAGCTATGGCTGTTACTCTCAAGTTAGCTATTGTTGCTGCACTCATAGTTGATTTAGCC
CTAGGTTTTGGCCATAATGCCTGGGCTGGCCTCTTCAGTGATGAAGCAGAGATTATTCAC
AAATTTGCCTCAATGACACCTCTCCTATTAGTCTCTTTCTTGTTCGATTTCATACAAGGA
ATTCTATCAGGAGTGGCAAGAGGATGTGGATGGCAACGTTTCGCAATGTGCATCAACTTG
GCAAGTTTCTATTTCTTTGGTATGACAATAGGCGCGGTCCTGGCTTTCAAGTTCAACAAA
GGATATAAGGGTTTATGGGTAGGGTTGATTTGTGGTCTAGCATGCCAATCTACTAGCTTG
TTGCTATTGACATTCTTTATAAAATGGGGAAAAGAAGATCAAGTCTCAAATGATACCAGC
AATGAAAATGAACCCCAGCCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400036836
PEP Infomation

pacid=37479562 transcript=PGSC0003DMT400054764 locus=PGSC0003DMG400021259 ID=PGSC0003DMT400054764.v4.03 annot-version=v4.03
Sequence

MTITNLNAPSPEEIVLPSAPAPTPTPAPALTPALAPAPTPSPGLTPAPAPTPAPAPTLLE
QKDNAMNKSCGKIINCKEAKNQVLFSVPMIVVNGCFYFISLVSVMFAGHLGKLELASSNL
ANSWAMVTGFSFMVGLSGALETLCGQGYGAKMFRMLGIHLQTSSIISFFFSVVVSVIWWY
SDRILILLHQEPAIAHEAGVFLKFLIPGLIAYAFLQNIVRFLQAQSIILPLACIAVAALV
VHIGIAYALVHWTHLAYKGAALAVSISFWLTFITLSLYVLFSKKFSHIRPEGLSSEPLQH
LLSNLKLALPSAGMVCLEYWAFEILVLLAGLMPNAETTTSVVAMCVNTETIAYMISYGLS
AAASTRVSNEIGAGNIRKAKQAMAVTLKLAIVAALIVDLALGFGHNAWAGLFSDEAEIIH
KFASMTPLLLVSFLFDFIQGILSGVARGCGWQRFAMCINLASFYFFGMTIGAVLAFKFNK
GYKGLWVGLICGLACQSTSLLLLTFFIKWGKEDQVSNDTSNENEPQP*

Transcript Sequence

Transcript ID

PGSC0003DMT400054764
Transcript Infomation

pacid=37479562 locus=PGSC0003DMG400021259 ID=PGSC0003DMT400054764.v4.03 annot-version=v4.03
Sequence

ATGACAATAACTAATTTGAACGCACCGTCACCCGAGGAGATTGTCCTCCCATCGGCACCG
GCACCAACTCCGACTCCGGCACCAGCACTAACTCCGGCATTGGCACCAGCACCAACTCCG
TCACCGGGACTAACTCCGGCACCGGCACCAACTCCGGCACCGGCGCCAACATTGCTTGAA
CAAAAGGACAATGCAATGAACAAGTCTTGTGGAAAGATAATCAATTGTAAAGAAGCGAAA
AATCAAGTGTTGTTCTCCGTTCCGATGATCGTCGTGAACGGTTGTTTCTACTTCATCAGC
CTCGTCTCCGTCATGTTCGCCGGACACCTCGGGAAACTCGAGCTTGCTTCATCGAATCTT
GCTAATTCATGGGCCATGGTTACTGGTTTCTCTTTCATGGTCGGACTAAGTGGTGCACTT
GAGACATTATGTGGCCAAGGATACGGCGCGAAAATGTTTAGGATGCTAGGGATACATCTT
CAAACATCAAGCATCATATCATTCTTCTTTTCTGTTGTTGTTTCTGTCATCTGGTGGTAT
TCGGATCGAATTCTGATTTTACTTCATCAAGAACCTGCCATAGCACATGAAGCAGGGGTG
TTCTTGAAGTTCCTCATACCTGGATTGATTGCATATGCTTTCTTGCAAAACATTGTGAGG
TTTCTTCAAGCTCAATCGATCATATTACCTTTAGCTTGCATCGCGGTTGCAGCTCTAGTT
GTCCACATTGGCATTGCATATGCTCTGGTTCATTGGACACATCTTGCTTACAAAGGAGCA
GCGTTAGCAGTATCGATTTCATTTTGGCTCACATTCATTACGTTGAGTCTATACGTGCTT
TTCTCCAAGAAATTTAGTCATATAAGGCCCGAAGGTCTCTCATCCGAGCCACTTCAACAT
CTTCTTTCAAACTTGAAGTTGGCTTTGCCCTCTGCAGGCATGGTGTGCTTGGAGTATTGG
GCATTTGAGATTCTTGTGTTATTAGCTGGTTTGATGCCAAACGCGGAAACAACTACTTCT
GTCGTTGCAATGTGTGTAAATACAGAAACCATAGCCTACATGATATCTTATGGCCTCAGT
GCAGCTGCAAGCACAAGGGTGTCAAACGAGATAGGAGCAGGAAATATCCGCAAAGCTAAA
CAAGCTATGGCTGTTACTCTCAAGTTAGCTATTGTTGCTGCACTCATAGTTGATTTAGCC
CTAGGTTTTGGCCATAATGCCTGGGCTGGCCTCTTCAGTGATGAAGCAGAGATTATTCAC
AAATTTGCCTCAATGACACCTCTCCTATTAGTCTCTTTCTTGTTCGATTTCATACAAGGA
ATTCTATCAGGAGTGGCAAGAGGATGTGGATGGCAACGTTTCGCAATGTGCATCAACTTG
GCAAGTTTCTATTTCTTTGGTATGACAATAGGCGCGGTCCTGGCTTTCAAGTTCAACAAA
GGATATAAGGGTTTATGGGTAGGGTTGATTTGTGGTCTAGCATGCCAATCTACTAGCTTG
TTGCTATTGACATTCTTTATAAAATGGGGAAAAGAAGATCAAGTCTCAAATGATACCAGC
AATGAAAATGAACCCCAGCCTTAA