Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054761
CDS Infomation

pacid=37476609 polypeptide=PGSC0003DMP400036833 locus=PGSC0003DMG400021257 ID=PGSC0003DMT400054761.v4.03 annot-version=v4.03
Sequence

ATGGCGGATATCGAAACCCTAGGCATCGTCGATGAGATTCAAGCTCTTGTATCAGACAAA
CTTCAAGTGGTTTCGTACAAGTGGCTGAGTCGAAATTTTTTGGTGTCATCAAATTCTGCA
AAGAGGTTGCTTCAGGAATTTGTTGAAAAGCATGGAAGTGGTCTTGAAGTAGTCTACAGC
TTGTCTGGCTGGTTGAAAGATAGCCCTTCAACCTACCATATAAGACTTGTCTCTTCTGCT
AACCTCGCAGAAGCCAAGAAAGAATTTTCGGATGATTGCTCAGTCCAGGTCTATAGCGTG
CAAGCTTGCATCCCAAAGGATCCAGTGGCCCTCTGGAATTCTGAATTTGTCCAGGCCGAA
GAGCTATTTAGGCAGTCCCTCTCAGTTGATAATTGTTTGCTTGATAATAGGTTTTGTGGA
GTTTCAAATCCTTTCATCACGCGCAGCGGTGGAGGAACAATTCCAAGCACTAATACTGTT
CCTCAGGTGAAAAGTGAAGCTTCAGGACTTCGTAATAGTAACTCTACTGCTCAAGTGAAA
CCTGAGCTGAAAAAGGTTCAACTACCAAGTCCTAGTGCCAGTGTGCCATCTTCACATGTG
GTTGATGCCAAAAGTGAGAGTCGTGGCACATCAGGTCCTGGAGAGGGTAGTAAGTTTGTT
GCAGATAAACACAAAGTTGCTCAACTTCCACCTGCTAAGAAGGCAGTTCAGTCTGAAAAA
ACTTCTTCTAAAAATGGTGGGGCATTGGCTAATATGTGGGGTCGTGTACCTACAAAGCCA
AAAGTCGAAATTGTTTCAGCTGCTACCAGTGATGCCACACCAAATCCTGTTGGTAATGCG
GCTCAGATATGTACTCCAGAAGGAGTAGAAGATAGGATCAGTGATGACGATGATCAACAA
GTCAGCATCAGGAGAACATCAAATGGTGAGGGGAATAGAAAAAGGAGGGTAATTTTTGAT
TTTTCGGATGAAGAAGATGAATTCAAGGATGCTGTCAACCTAGCCTCACCTGATCCTCCA
AAGCAGAAATCTATTTTAGGGTCAAAACAAACTCCTAGTACTCCAGAACTGGAAAAGCGG
GAAGTCAAGAAAGTAAAGGAGGCTGGCAGCAAGAGTAATGAGCAAGAAACATTCTCAAAA
AAGAGTCATGAGCAAGAAACATTCTCAAAAAGGAGTCATGAGCAAGAAAGAAAACCTTTA
CCTACCAGCGAACCTAAGTCTTCTAAGTTGCATTCTTCAGAGATTATTTCAGAACATGCC
AGTCCTAAGAATGCTGCTGTAAAGGATGAAGTCACCAATGCTGCTCCAACTTCCCCTAAA
AGAAGAAAAGTAATGAAGACACGAATTGACGAACGTGGAAGAGAAGTGACCGAGGTTGTT
TGGGAAGGTGAAGATACAGAAATAAAGGCTGACAGTAATACAATGAAGAAAGCTGACAAC
AATCCAGTTAATAGTACTGGTGACAGAGCACCTATGGCTAAGAAGTCTCCCGCTCTGGGA
AGTTCCGCACCTACAAATCAAGCCAGTAAAGCAGGAAACAAGAAAGCTGGAAATAAGGAT
CCTAAACAAGGAAATATCCTATCATTTTTTAAGAAGAAGGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400036833
PEP Infomation

pacid=37476609 transcript=PGSC0003DMT400054761 locus=PGSC0003DMG400021257 ID=PGSC0003DMT400054761.v4.03 annot-version=v4.03
Sequence

MADIETLGIVDEIQALVSDKLQVVSYKWLSRNFLVSSNSAKRLLQEFVEKHGSGLEVVYS
LSGWLKDSPSTYHIRLVSSANLAEAKKEFSDDCSVQVYSVQACIPKDPVALWNSEFVQAE
ELFRQSLSVDNCLLDNRFCGVSNPFITRSGGGTIPSTNTVPQVKSEASGLRNSNSTAQVK
PELKKVQLPSPSASVPSSHVVDAKSESRGTSGPGEGSKFVADKHKVAQLPPAKKAVQSEK
TSSKNGGALANMWGRVPTKPKVEIVSAATSDATPNPVGNAAQICTPEGVEDRISDDDDQQ
VSIRRTSNGEGNRKRRVIFDFSDEEDEFKDAVNLASPDPPKQKSILGSKQTPSTPELEKR
EVKKVKEAGSKSNEQETFSKKSHEQETFSKRSHEQERKPLPTSEPKSSKLHSSEIISEHA
SPKNAAVKDEVTNAAPTSPKRRKVMKTRIDERGREVTEVVWEGEDTEIKADSNTMKKADN
NPVNSTGDRAPMAKKSPALGSSAPTNQASKAGNKKAGNKDPKQGNILSFFKKKA*

Transcript Sequence

Transcript ID

PGSC0003DMT400054761
Transcript Infomation

pacid=37476609 locus=PGSC0003DMG400021257 ID=PGSC0003DMT400054761.v4.03 annot-version=v4.03
Sequence

ATGGCGGATATCGAAACCCTAGGCATCGTCGATGAGATTCAAGCTCTTGTATCAGACAAA
CTTCAAGTGGTTTCGTACAAGTGGCTGAGTCGAAATTTTTTGGTGTCATCAAATTCTGCA
AAGAGGTTGCTTCAGGAATTTGTTGAAAAGCATGGAAGTGGTCTTGAAGTAGTCTACAGC
TTGTCTGGCTGGTTGAAAGATAGCCCTTCAACCTACCATATAAGACTTGTCTCTTCTGCT
AACCTCGCAGAAGCCAAGAAAGAATTTTCGGATGATTGCTCAGTCCAGGTCTATAGCGTG
CAAGCTTGCATCCCAAAGGATCCAGTGGCCCTCTGGAATTCTGAATTTGTCCAGGCCGAA
GAGCTATTTAGGCAGTCCCTCTCAGTTGATAATTGTTTGCTTGATAATAGGTTTTGTGGA
GTTTCAAATCCTTTCATCACGCGCAGCGGTGGAGGAACAATTCCAAGCACTAATACTGTT
CCTCAGGTGAAAAGTGAAGCTTCAGGACTTCGTAATAGTAACTCTACTGCTCAAGTGAAA
CCTGAGCTGAAAAAGGTTCAACTACCAAGTCCTAGTGCCAGTGTGCCATCTTCACATGTG
GTTGATGCCAAAAGTGAGAGTCGTGGCACATCAGGTCCTGGAGAGGGTAGTAAGTTTGTT
GCAGATAAACACAAAGTTGCTCAACTTCCACCTGCTAAGAAGGCAGTTCAGTCTGAAAAA
ACTTCTTCTAAAAATGGTGGGGCATTGGCTAATATGTGGGGTCGTGTACCTACAAAGCCA
AAAGTCGAAATTGTTTCAGCTGCTACCAGTGATGCCACACCAAATCCTGTTGGTAATGCG
GCTCAGATATGTACTCCAGAAGGAGTAGAAGATAGGATCAGTGATGACGATGATCAACAA
GTCAGCATCAGGAGAACATCAAATGGTGAGGGGAATAGAAAAAGGAGGGTAATTTTTGAT
TTTTCGGATGAAGAAGATGAATTCAAGGATGCTGTCAACCTAGCCTCACCTGATCCTCCA
AAGCAGAAATCTATTTTAGGGTCAAAACAAACTCCTAGTACTCCAGAACTGGAAAAGCGG
GAAGTCAAGAAAGTAAAGGAGGCTGGCAGCAAGAGTAATGAGCAAGAAACATTCTCAAAA
AAGAGTCATGAGCAAGAAACATTCTCAAAAAGGAGTCATGAGCAAGAAAGAAAACCTTTA
CCTACCAGCGAACCTAAGTCTTCTAAGTTGCATTCTTCAGAGATTATTTCAGAACATGCC
AGTCCTAAGAATGCTGCTGTAAAGGATGAAGTCACCAATGCTGCTCCAACTTCCCCTAAA
AGAAGAAAAGTAATGAAGACACGAATTGACGAACGTGGAAGAGAAGTGACCGAGGTTGTT
TGGGAAGGTGAAGATACAGAAATAAAGGCTGACAGTAATACAATGAAGAAAGCTGACAAC
AATCCAGTTAATAGTACTGGTGACAGAGCACCTATGGCTAAGAAGTCTCCCGCTCTGGGA
AGTTCCGCACCTACAAATCAAGCCAGTAAAGCAGGAAACAAGAAAGCTGGAAATAAGGAT
CCTAAACAAGGAAATATCCTATCATTTTTTAAGAAGAAGGCTTAG