Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054755
CDS Infomation

pacid=37478033 polypeptide=PGSC0003DMP400036828 locus=PGSC0003DMG400021254 ID=PGSC0003DMT400054755.v4.03 annot-version=v4.03
Sequence

ATGTCAACATACACCCCTAAGAATATACTCATTACTGGAGCTGCCGGATTTATTGCATGT
CATGTAGCCAACAGGCTTGTTCGGAGCTACCCTGATTACAAGATTGTTGTCCTTGACAAA
CTTGACTATTGTTCAAATTTGAAGAACCTTATTCCTTCCCGATCTTCCCCTAATTTCAAG
TTTGTTAAGGGAGACATTGCTAGTGCAGATCTCGTTAACTACCTTCTCATAACTGAGTCC
ATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTTGATAACTCCTTTGGTAATAGC
TTTGAGTTCACTAAGAATAACATCTATGGTACCCATGTACTATTAGAGGCCTGCAAAGTT
ACTGGTCAGATCAAAAGGTTTATCCATGTGAGTACAGATGAGGTCTATGGGGAGACTGAT
GAGGATGCTGTTGTAGGAAACCACGAAGCCTCACAACTCCTTCCCACTAACCCATATTCA
GCCACAAAAGCTGGGGCTGAAATGCTTGTTATGGCTTATGGTAGATCATATGGGTTACCT
GTTATAACCACTAGAGGGAACAATGTCTATGGTCCTAACCAATTTCCTGAGAAACTAATC
CCTAAGTTTATACTTTTAGCCATGAGGGGAAAGCCTCTTCCTATTCATGGTGATGGTTGT
AATGTTCGTAGTTATCTCTATTGTGAGGATGTTGCTGAGGCTTTTGAAGTTGTTCTACAC
AAGGGAGAGGTCGGTCACGTTTATAACATTGGAACTACAAAAGAGAGAAGAGTGATTGAT
GTTGCCCAAGATATATGCAAACTCTTTAACATAGATTCAGAGAAAGTTATTCAGTTTGTG
GAGAACAGGCCATTTAATGACCAAAGGTACTTTCTGGATGATCAGAAGTTGAAGAACTTG
GGTTGGTCTGAGACGACCATGTGGGAAGAGGGTCTGAAAAAGACTATTGAATGGTATAAG
AATAACCCTGATTGGTGGGGGGATGTCTCTGGAGCATTGCTTCCCCATCCTAGAATGCTG
ATGATGCCTGGTGATATAGAAAGAAATTTGGATGGAGCTGAGAAATATGATTCTGGATCT
ACCGAATTCTCAGGGAAGTCCAATGAAACCAAAACGGCAGCTCCAGCTTCAAAGACCAGC
AATGTGCCTCAGAAATCCCCTTTTAAGTTCTTGATCTATGGTAGGACTGGGTGGATTGGC
GGTGTGCTAGGGAAATTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGCAGGGGACGT
TTGGAAGATCGCTCAAAGCTTTTGGCAGACATTAATTCTGTCAAGCCCACACATGTATTC
AATGCTGCTGGTGTCACTGGTAGACCCAATGTTGATTGGTGTGAGAGTCATAAACCAGAA
ACAATTCGCACAAATGTTGCTGGTACTCTAAACTTGGCAGATGTTTGCAGAGAGAATGGC
CTCCTGATGGTGAACTTTGCCACTGGCTGCATATTTGAGTATGATGCTGCACATCCAGAA
GGTTCTGGTATTGGGTTCAAAGAGGAAGACACACCCAATTTCGCTGGTTCTTTCTATTCA
AAGACCAAGGCCATGGTCGAAGATCTGTTGAAAAATTATGACAATGTTTGCACACTCAGA
GTTCGCATGCCAATATCTTCAGATCTCAGCAACCCTCGCAATTTCATTACCAAGATCAGC
CGCTACAATAAGGTGGTCAATATTCCTAACAGTATGACCATATTGGATGAGCTTCTTCCG
ATTTCAATTGAGATGGCAAAGCGTAACCTCAGAGGCATATGGAATTTCACAAACCCTGGT
GTTGTGAGCCATAATGAGATATTGGAAATGTACAAGAAATATATCGATCCAGCATTTACT
TATGCCAACTTCACAGTGGAAGAGCAGGCCAAGGTAATCGTTGCAGCTCGCAGTAACAAT
GAGATGGATGCATCAAAGTTGAAGAAAGAGTTCCCTGAGTTGCTATCAATCAAAGAGTCA
CTGATCAAGAATGTTTTTGAACCAAACAAGAAAACCTCTGCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400036828
PEP Infomation

pacid=37478033 transcript=PGSC0003DMT400054755 locus=PGSC0003DMG400021254 ID=PGSC0003DMT400054755.v4.03 annot-version=v4.03
Sequence

MSTYTPKNILITGAAGFIACHVANRLVRSYPDYKIVVLDKLDYCSNLKNLIPSRSSPNFK
FVKGDIASADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMRGKPLPIHGDGCNVRSYLYCEDVAEAFEVVLH
KGEVGHVYNIGTTKERRVIDVAQDICKLFNIDSEKVIQFVENRPFNDQRYFLDDQKLKNL
GWSETTMWEEGLKKTIEWYKNNPDWWGDVSGALLPHPRMLMMPGDIERNLDGAEKYDSGS
TEFSGKSNETKTAAPASKTSNVPQKSPFKFLIYGRTGWIGGVLGKLCEKQGIPYEYGRGR
LEDRSKLLADINSVKPTHVFNAAGVTGRPNVDWCESHKPETIRTNVAGTLNLADVCRENG
LLMVNFATGCIFEYDAAHPEGSGIGFKEEDTPNFAGSFYSKTKAMVEDLLKNYDNVCTLR
VRMPISSDLSNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPG
VVSHNEILEMYKKYIDPAFTYANFTVEEQAKVIVAARSNNEMDASKLKKEFPELLSIKES
LIKNVFEPNKKTSA*

Transcript Sequence

Transcript ID

PGSC0003DMT400054755
Transcript Infomation

pacid=37478033 locus=PGSC0003DMG400021254 ID=PGSC0003DMT400054755.v4.03 annot-version=v4.03
Sequence

ATGTCAACATACACCCCTAAGAATATACTCATTACTGGAGCTGCCGGATTTATTGCATGT
CATGTAGCCAACAGGCTTGTTCGGAGCTACCCTGATTACAAGATTGTTGTCCTTGACAAA
CTTGACTATTGTTCAAATTTGAAGAACCTTATTCCTTCCCGATCTTCCCCTAATTTCAAG
TTTGTTAAGGGAGACATTGCTAGTGCAGATCTCGTTAACTACCTTCTCATAACTGAGTCC
ATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTTGATAACTCCTTTGGTAATAGC
TTTGAGTTCACTAAGAATAACATCTATGGTACCCATGTACTATTAGAGGCCTGCAAAGTT
ACTGGTCAGATCAAAAGGTTTATCCATGTGAGTACAGATGAGGTCTATGGGGAGACTGAT
GAGGATGCTGTTGTAGGAAACCACGAAGCCTCACAACTCCTTCCCACTAACCCATATTCA
GCCACAAAAGCTGGGGCTGAAATGCTTGTTATGGCTTATGGTAGATCATATGGGTTACCT
GTTATAACCACTAGAGGGAACAATGTCTATGGTCCTAACCAATTTCCTGAGAAACTAATC
CCTAAGTTTATACTTTTAGCCATGAGGGGAAAGCCTCTTCCTATTCATGGTGATGGTTGT
AATGTTCGTAGTTATCTCTATTGTGAGGATGTTGCTGAGGCTTTTGAAGTTGTTCTACAC
AAGGGAGAGGTCGGTCACGTTTATAACATTGGAACTACAAAAGAGAGAAGAGTGATTGAT
GTTGCCCAAGATATATGCAAACTCTTTAACATAGATTCAGAGAAAGTTATTCAGTTTGTG
GAGAACAGGCCATTTAATGACCAAAGGTACTTTCTGGATGATCAGAAGTTGAAGAACTTG
GGTTGGTCTGAGACGACCATGTGGGAAGAGGGTCTGAAAAAGACTATTGAATGGTATAAG
AATAACCCTGATTGGTGGGGGGATGTCTCTGGAGCATTGCTTCCCCATCCTAGAATGCTG
ATGATGCCTGGTGATATAGAAAGAAATTTGGATGGAGCTGAGAAATATGATTCTGGATCT
ACCGAATTCTCAGGGAAGTCCAATGAAACCAAAACGGCAGCTCCAGCTTCAAAGACCAGC
AATGTGCCTCAGAAATCCCCTTTTAAGTTCTTGATCTATGGTAGGACTGGGTGGATTGGC
GGTGTGCTAGGGAAATTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGCAGGGGACGT
TTGGAAGATCGCTCAAAGCTTTTGGCAGACATTAATTCTGTCAAGCCCACACATGTATTC
AATGCTGCTGGTGTCACTGGTAGACCCAATGTTGATTGGTGTGAGAGTCATAAACCAGAA
ACAATTCGCACAAATGTTGCTGGTACTCTAAACTTGGCAGATGTTTGCAGAGAGAATGGC
CTCCTGATGGTGAACTTTGCCACTGGCTGCATATTTGAGTATGATGCTGCACATCCAGAA
GGTTCTGGTATTGGGTTCAAAGAGGAAGACACACCCAATTTCGCTGGTTCTTTCTATTCA
AAGACCAAGGCCATGGTCGAAGATCTGTTGAAAAATTATGACAATGTTTGCACACTCAGA
GTTCGCATGCCAATATCTTCAGATCTCAGCAACCCTCGCAATTTCATTACCAAGATCAGC
CGCTACAATAAGGTGGTCAATATTCCTAACAGTATGACCATATTGGATGAGCTTCTTCCG
ATTTCAATTGAGATGGCAAAGCGTAACCTCAGAGGCATATGGAATTTCACAAACCCTGGT
GTTGTGAGCCATAATGAGATATTGGAAATGTACAAGAAATATATCGATCCAGCATTTACT
TATGCCAACTTCACAGTGGAAGAGCAGGCCAAGGTAATCGTTGCAGCTCGCAGTAACAAT
GAGATGGATGCATCAAAGTTGAAGAAAGAGTTCCCTGAGTTGCTATCAATCAAAGAGTCA
CTGATCAAGAATGTTTTTGAACCAAACAAGAAAACCTCTGCATAA