Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054719
CDS Infomation

pacid=37480300 polypeptide=PGSC0003DMP400036805 locus=PGSC0003DMG400021243 ID=PGSC0003DMT400054719.v4.03 annot-version=v4.03
Sequence

ATGGCATCTCCGACGATTCAGAGATCAACCCATTTATCATCTACACCCACATCTTCTTCA
TCTCCCCTTCAACGTCTCTCAACTTTCAAAGACAGATCCATCAATCCCACCCCTACTGCT
ACCGTTACTCCTACTCCAACCTCCGGCCTTACCCCATTCACACCTGCCTCTTCCCCTCTC
GATTCCTTCACTTCCGATCCCATTTTCTCGTCCTTCCTATCCTCTGACTTTGATTCCACA
CGTTTCTCCTCCGCCGCACTTTCCTCCGGTTCTACCGCTTCACGTATCGAGAAGCTTCAA
GAAGGTCTCCGTCTCCTTGACCATCAGCTTCGTCATGAAGTGCTTACACGTCATCATGAT
TTGCTCAATCAGCTTACTTCCTTACGTGCTGCTGAATCTGCACTTTCGACTCTTCGTTCG
TCGGTTTCGTCTCTTCAGTCATCGCTCCGTCGGGTCCGTTCTGAACTCTCTGATCCTCAT
CAAGTAATTGAAGCGAAGACACTTCAGCTTTCGAATCTTCATTCAGCTACTGAGCTTCTT
CAGTCGACAATTAGGACTATTCGGTTGTCTAAAAAGCTCAGGGATCTCATGGATTCGACT
CAAGACCAGGAGAAATTGGATCTTTCGAAAGCTGCTCAGCTACATTTTGAGATACTATCG
CTTTATAATGAGTACCATTTAGCCGGGATTGATGTGGTTGATTTGGAACTCAAGTGGGTT
CTTGAAATTGGGCAAAAATTACGGGCTGAAGGGATGAAGGTTTTGGAAAAAGGACTTGAA
GGTTTGAATCAAGCTGAAGTTGGGGCTGGGCTTCAGGTGTTTTATAATATGGGGGAGTTG
AGGGGAACTGTGGATGGGTTAGTTAGTAAGTATAAGGCAATGGGAGTGAAGAGTATAACG
ACGGCTTTGGATATGAAAGCTATATCTGTTGGTGGCGGATTTGGGCCGGGAGGGGTGCAG
AGAAGTGGGACACCACAATTTGGGGGAAGTGCAAAGGCGAAGGATGCATTGTGGCAAAGG
ATGAGTGGTTGTATGGACCAGTTGCATTCCATTGTGGTTGCTGTTTGGCATTTGCAGAGG
GTTTTATCGAAGAAAAGAGACCCCTTTACGCATGTCTTGCTGCTTGATGAGGTCATGCAG
GAAGGTGATCCAATATTGACAGATCGTGTTTGGGAGGCACTGGGTAAATCTTTTGCGAAC
CAAATGAAGTCCACTTTCAGCACATCAAGTTTTGTTAAGGAGATATTCACTCTTGGATAT
CCAAAACTCTTCTCTATGTTAGAAAACCTGCTTGAAAGAATTTCACGTGATACAGATGTC
AAAGGAGTTCCACCAGCTCTCAGTTCAGAAGCAAAGGACCAAATGTTATCTTCCATTGAA
ATATTCCAGACTGCTTTCCTAACCCTCTGTCTGAGCCGTCTTTCAGAACTTGTTAATACT
GTATTTCCAGTGTCCAGTCGTGGAACTGTTCCTTCAAAAGATCACATAGCAAGGATTATA
TCACGAATTCAAGAAGAAATAGAAGCCGTCCAGATGGATGCTCGGTTAACTCTTCTTGTC
TTGCGTGAGATCAACAAAGTTCTGCTCCTGCTTTCAGAAAGAACAGAATACCAGATATCT
GCAGGGCCTGAGGCACGACAGATAACAGGTCCTGCAACTCCAGCACAGGTGAAGAACTTT
GCATTATGCCAGCATCTGCAAGAAATTCATACCCGCATATCATCTATGGTGTCAGGATTA
CCATCTATTGCAACCGATATTCTGTCTCCCGCTCTGGGATCTATCTATGGGGTTGCAGGT
GATTCAGTGACACCACTATTCCAATCAATGCTTGATCGACTAGAGTCATGCATCTTGCAA
ATTCATGATCAAAATTTTGGTAGTCTCGGTATGGATGCTGCTATGGACAATAATGCATCA
CCTTATATGGAAGAGTTGCAGAAGAGTATTCTCCATTTCCGTAGTGAATTCCTGTCCAGG
CTGTTGCCTTCTTCGTCAAATAGCTTGACTACAGGTTCAGAAACTATTTGTACTACCCTC
GTGAGGAGCATGGCTTCTAGAGTTCTGATATTTTTCATCAGGCATGCTTCACTCGTTAGA
CCTCTCTCAGAATCAGGCAAGTTAAGATTAGCCAGGGACATGGCTGAGCTGGAATTGGCA
GTTGGCCAAAACTTGTTTCCAGTTGAACAACTCGGTGCCCCATATCGAGCACTTAGAGCA
TTTCGTCCTGTTATATTCCTGGAAACATCTCAACTTGCTTCATCCCCACTTCGTCAAGAT
CTACCACCAAGTGTCATACTGCACCATCTTTACTCACGCGGTCCTGAAGAGCTTCAATCA
CCCTTGCAAAGGAATAGACTTACTCCAATGCAGTATTCACTGTGGATGGATTCACAAGGT
GAGGACCAGATCTGGAAAGGCATTAAAGCTACACTGGACGATTATGCTGCTAAGGTACGT
TCAAGAGGAGACAAAGAATTTAGTCCCGTCTATCCTTTAATGATAGAAATTGGTTCCTCT
CTATCTGGGAATCGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400036805
PEP Infomation

pacid=37480300 transcript=PGSC0003DMT400054719 locus=PGSC0003DMG400021243 ID=PGSC0003DMT400054719.v4.03 annot-version=v4.03
Sequence

MASPTIQRSTHLSSTPTSSSSPLQRLSTFKDRSINPTPTATVTPTPTSGLTPFTPASSPL
DSFTSDPIFSSFLSSDFDSTRFSSAALSSGSTASRIEKLQEGLRLLDHQLRHEVLTRHHD
LLNQLTSLRAAESALSTLRSSVSSLQSSLRRVRSELSDPHQVIEAKTLQLSNLHSATELL
QSTIRTIRLSKKLRDLMDSTQDQEKLDLSKAAQLHFEILSLYNEYHLAGIDVVDLELKWV
LEIGQKLRAEGMKVLEKGLEGLNQAEVGAGLQVFYNMGELRGTVDGLVSKYKAMGVKSIT
TALDMKAISVGGGFGPGGVQRSGTPQFGGSAKAKDALWQRMSGCMDQLHSIVVAVWHLQR
VLSKKRDPFTHVLLLDEVMQEGDPILTDRVWEALGKSFANQMKSTFSTSSFVKEIFTLGY
PKLFSMLENLLERISRDTDVKGVPPALSSEAKDQMLSSIEIFQTAFLTLCLSRLSELVNT
VFPVSSRGTVPSKDHIARIISRIQEEIEAVQMDARLTLLVLREINKVLLLLSERTEYQIS
AGPEARQITGPATPAQVKNFALCQHLQEIHTRISSMVSGLPSIATDILSPALGSIYGVAG
DSVTPLFQSMLDRLESCILQIHDQNFGSLGMDAAMDNNASPYMEELQKSILHFRSEFLSR
LLPSSSNSLTTGSETICTTLVRSMASRVLIFFIRHASLVRPLSESGKLRLARDMAELELA
VGQNLFPVEQLGAPYRALRAFRPVIFLETSQLASSPLRQDLPPSVILHHLYSRGPEELQS
PLQRNRLTPMQYSLWMDSQGEDQIWKGIKATLDDYAAKVRSRGDKEFSPVYPLMIEIGSS
LSGNR*

Transcript Sequence

Transcript ID

PGSC0003DMT400054719
Transcript Infomation

pacid=37480300 locus=PGSC0003DMG400021243 ID=PGSC0003DMT400054719.v4.03 annot-version=v4.03
Sequence

ATGGCATCTCCGACGATTCAGAGATCAACCCATTTATCATCTACACCCACATCTTCTTCA
TCTCCCCTTCAACGTCTCTCAACTTTCAAAGACAGATCCATCAATCCCACCCCTACTGCT
ACCGTTACTCCTACTCCAACCTCCGGCCTTACCCCATTCACACCTGCCTCTTCCCCTCTC
GATTCCTTCACTTCCGATCCCATTTTCTCGTCCTTCCTATCCTCTGACTTTGATTCCACA
CGTTTCTCCTCCGCCGCACTTTCCTCCGGTTCTACCGCTTCACGTATCGAGAAGCTTCAA
GAAGGTCTCCGTCTCCTTGACCATCAGCTTCGTCATGAAGTGCTTACACGTCATCATGAT
TTGCTCAATCAGCTTACTTCCTTACGTGCTGCTGAATCTGCACTTTCGACTCTTCGTTCG
TCGGTTTCGTCTCTTCAGTCATCGCTCCGTCGGGTCCGTTCTGAACTCTCTGATCCTCAT
CAAGTAATTGAAGCGAAGACACTTCAGCTTTCGAATCTTCATTCAGCTACTGAGCTTCTT
CAGTCGACAATTAGGACTATTCGGTTGTCTAAAAAGCTCAGGGATCTCATGGATTCGACT
CAAGACCAGGAGAAATTGGATCTTTCGAAAGCTGCTCAGCTACATTTTGAGATACTATCG
CTTTATAATGAGTACCATTTAGCCGGGATTGATGTGGTTGATTTGGAACTCAAGTGGGTT
CTTGAAATTGGGCAAAAATTACGGGCTGAAGGGATGAAGGTTTTGGAAAAAGGACTTGAA
GGTTTGAATCAAGCTGAAGTTGGGGCTGGGCTTCAGGTGTTTTATAATATGGGGGAGTTG
AGGGGAACTGTGGATGGGTTAGTTAGTAAGTATAAGGCAATGGGAGTGAAGAGTATAACG
ACGGCTTTGGATATGAAAGCTATATCTGTTGGTGGCGGATTTGGGCCGGGAGGGGTGCAG
AGAAGTGGGACACCACAATTTGGGGGAAGTGCAAAGGCGAAGGATGCATTGTGGCAAAGG
ATGAGTGGTTGTATGGACCAGTTGCATTCCATTGTGGTTGCTGTTTGGCATTTGCAGAGG
GTTTTATCGAAGAAAAGAGACCCCTTTACGCATGTCTTGCTGCTTGATGAGGTCATGCAG
GAAGGTGATCCAATATTGACAGATCGTGTTTGGGAGGCACTGGGTAAATCTTTTGCGAAC
CAAATGAAGTCCACTTTCAGCACATCAAGTTTTGTTAAGGAGATATTCACTCTTGGATAT
CCAAAACTCTTCTCTATGTTAGAAAACCTGCTTGAAAGAATTTCACGTGATACAGATGTC
AAAGGAGTTCCACCAGCTCTCAGTTCAGAAGCAAAGGACCAAATGTTATCTTCCATTGAA
ATATTCCAGACTGCTTTCCTAACCCTCTGTCTGAGCCGTCTTTCAGAACTTGTTAATACT
GTATTTCCAGTGTCCAGTCGTGGAACTGTTCCTTCAAAAGATCACATAGCAAGGATTATA
TCACGAATTCAAGAAGAAATAGAAGCCGTCCAGATGGATGCTCGGTTAACTCTTCTTGTC
TTGCGTGAGATCAACAAAGTTCTGCTCCTGCTTTCAGAAAGAACAGAATACCAGATATCT
GCAGGGCCTGAGGCACGACAGATAACAGGTCCTGCAACTCCAGCACAGGTGAAGAACTTT
GCATTATGCCAGCATCTGCAAGAAATTCATACCCGCATATCATCTATGGTGTCAGGATTA
CCATCTATTGCAACCGATATTCTGTCTCCCGCTCTGGGATCTATCTATGGGGTTGCAGGT
GATTCAGTGACACCACTATTCCAATCAATGCTTGATCGACTAGAGTCATGCATCTTGCAA
ATTCATGATCAAAATTTTGGTAGTCTCGGTATGGATGCTGCTATGGACAATAATGCATCA
CCTTATATGGAAGAGTTGCAGAAGAGTATTCTCCATTTCCGTAGTGAATTCCTGTCCAGG
CTGTTGCCTTCTTCGTCAAATAGCTTGACTACAGGTTCAGAAACTATTTGTACTACCCTC
GTGAGGAGCATGGCTTCTAGAGTTCTGATATTTTTCATCAGGCATGCTTCACTCGTTAGA
CCTCTCTCAGAATCAGGCAAGTTAAGATTAGCCAGGGACATGGCTGAGCTGGAATTGGCA
GTTGGCCAAAACTTGTTTCCAGTTGAACAACTCGGTGCCCCATATCGAGCACTTAGAGCA
TTTCGTCCTGTTATATTCCTGGAAACATCTCAACTTGCTTCATCCCCACTTCGTCAAGAT
CTACCACCAAGTGTCATACTGCACCATCTTTACTCACGCGGTCCTGAAGAGCTTCAATCA
CCCTTGCAAAGGAATAGACTTACTCCAATGCAGTATTCACTGTGGATGGATTCACAAGGT
GAGGACCAGATCTGGAAAGGCATTAAAGCTACACTGGACGATTATGCTGCTAAGGTACGT
TCAAGAGGAGACAAAGAATTTAGTCCCGTCTATCCTTTAATGATAGAAATTGGTTCCTCT
CTATCTGGGAATCGTTAG