Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054712
CDS Infomation

pacid=37480071 polypeptide=PGSC0003DMP400036801 locus=PGSC0003DMG400021241 ID=PGSC0003DMT400054712.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGCCTTTAAAGAAACCTATGTCAAACGTCTCTGAAGCTGCTTCAACAAAAACT
CCTTACAAAGAGAAGAATGCTTGGGCCATTCCCCTTGGATCTGCCGCATATCATACATCA
ACTGATACAAGCTTGTTCTCTAGCTCATTGCCTGTGCTACCTCATGCAAAGTTAAACTTC
AATGAGTCCGAGCACTATGGTCAATCCATTGATGATAGCTCACCTAGCTTAAGCAAGCTT
CAATTGGAAGATAAAATTAAAGATCCGTTAGAAGAGGTTGAGTCAAGTCCAGTTGGGTTC
TTGCTTCCAGGGGATGAAGATGAGCTACTAGCAGGCTTAATGGATGACTTTGATCTTAGT
GGATTACCGTCTCAACTGGAGGACTTGGAAGATGATTTTTTTGGCAGTGGAGGACTAGAA
ATGGAACCTGAGGATCAAAATAATTTACTTAATGGTTTTGCAACCTTAAGCATGTACGAT
GGTATTCCTGGAAGCAGTAGTGGACATTATAGTGTTCCAAATGGTGCTGCAACTGTTGTG
GGGGAACACCCATATGGAGAGCATCCATCAAGGACATTATTCGTTCGAAATATTAACAGC
AATGTAGAGGACTCGGAGTTGAAATCTCTCTTTGAGCAATTTGGTGATATCAGAACCCTA
TATACTGCATGCAAGCATAGGGGCTTTGTGATGATATCTTACTATGACATCCGAGCTGCT
CGAACCGCAATGCGTGCTCTACAAAATAAGCCCTTGAGACGAAGAAAGCTCGACATTCAT
TTTTCCATTCCTAAGGAAAATCCATCAGAGAAAGATATTAACCAAGGAACTCTTGTCGTG
TTCAACTTGGATCCATCGGTATCCAATGAGGATCTTCGGCAAATCTTTGGAGTGTATGGG
GAAGTCAAGGAGATCAGAGAGACACCACATAAACGCCATCATAAATTCATCGAATTCTAC
GATGTCAGAGCAGCCGATGCAGCTCTTAAAGCATTAAATCGTAGTGACATAGCTGGAAAG
CGGATAAAACTTGAACCCAGCCGGCCTGGTGGAGCCCGTCGAAATTTGATGCAGCAACTA
ACTCAAGAATTGGAACACGATGAAATTCGATCATTTAGGCACTCAGTTGGATCACCGGTT
GCCAGCTCTCCTCCAGGCAGCTGGTCAAACTTCGGCAGTCCAGTTGAACCCAACCCATTG
CGAGGTTATAGTCAATCACCTGGTCTGAGAAATCTCAGCCCTGTAAACGGTAATCTTATG
CCAGGGCTGGCCTCTATTCTTCCTGGACACCTCTCAAGTCCGAAGATTGCACCCATTGGT
AAAGATCCTGCAAGGGTTGGGCATTTGAATCAGGTAACTTCTAGTCCAAAGTCGTCGCAA
GGAGTGGGTTATCAGCATTCTTTTTCAGTCCCTGAGCAGAAACCAGCTTTAAGCATGGGA
TCTACGCCATTTGGTAACTCTAAGGCATCCGGTACTGGAACACTTTCTGGTCCACAGTTT
CTGTGGGGTAGTCCCCCTATTCACTCAGAGCGTTCTGACTCTCCTATCTGGCCAGCTTCA
TCAATGGCACATCCATTCGCATCAAATGGACAAGGACAAGGCTATCTCCATTCACGTAGG
CAAAGCTCTTTCCTTGGATCACATCACGTGGGGTCTGCTCCATCCGGAAATCCTCTGGAT
AGGCATTTTGGTTTTTTCCCGGAATCTCCTCAAACATCATATATAAACCCACATGCATTT
GGCAGTGGAGGTTCTAGTCATAACAGTGCAAGTCAGGTGATGAATATAGGTAGCCTTGGA
GCAATGAACATGGGTGGTGCTCTTACTGGGAACTTTACTGGAAGTGGTTCTCCTAGCTCT
AGAATGATGCCATTGACAAGGAATGGACCTATATTTTTCGGAAATGGTTCATATGGAGGA
GCAGGAACAGTTAATGGTGAAGGACTGATTGAACGTGGTCGAAATCGAAAAATTGAAAGT
GGTGGTAATCAGATTGACAACAAGAAACAGTATCAGCTTGATTTGGAGAAGATCATGAGT
GGAGGAGATACAAGGACCACCTTGATGATTAAGAACATCCCAAACAAGTACACTTCAAAG
ATGCTACTTGCAGCAATTGATGAGTCTCATAAGAGTACATACGATTTCATCTATTTGCCA
ATTGATTTCAAGAATAAATGTAATGTTGGTTATGCCTTCATTAACATGGTGTCTCCTGCA
CATATCGTCTCCTTTTATGAGGCATTCAATGGAAAGAAGTGGGAAAAGTTTAACAGTGAA
AAAGTTGCATCATTGGCTTATGCACGTATCCAGGGAAAGGTAGCTCTGGTTACTCACTTC
CAGAACTCAAGCTTGATGAATGAAGACAAAAGATGCCGACCAATTCTTTTCCAGTCAGAG
GGCCAAGAGGCAGCTGATGAGGAAACGTTGCCATCCAGCAATCTGAATATATGTATCCGC
CGGCCTGATGGGTCATATTCAGGAGATTCTCTTGATAGCCCAACAGGCGATCTAGATGGG
AGACCAGAGCTATTCACCGGAAGCAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036801
PEP Infomation

pacid=37480071 transcript=PGSC0003DMT400054712 locus=PGSC0003DMG400021241 ID=PGSC0003DMT400054712.v4.03 annot-version=v4.03
Sequence

MEKPLKKPMSNVSEAASTKTPYKEKNAWAIPLGSAAYHTSTDTSLFSSSLPVLPHAKLNF
NESEHYGQSIDDSSPSLSKLQLEDKIKDPLEEVESSPVGFLLPGDEDELLAGLMDDFDLS
GLPSQLEDLEDDFFGSGGLEMEPEDQNNLLNGFATLSMYDGIPGSSSGHYSVPNGAATVV
GEHPYGEHPSRTLFVRNINSNVEDSELKSLFEQFGDIRTLYTACKHRGFVMISYYDIRAA
RTAMRALQNKPLRRRKLDIHFSIPKENPSEKDINQGTLVVFNLDPSVSNEDLRQIFGVYG
EVKEIRETPHKRHHKFIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQL
TQELEHDEIRSFRHSVGSPVASSPPGSWSNFGSPVEPNPLRGYSQSPGLRNLSPVNGNLM
PGLASILPGHLSSPKIAPIGKDPARVGHLNQVTSSPKSSQGVGYQHSFSVPEQKPALSMG
STPFGNSKASGTGTLSGPQFLWGSPPIHSERSDSPIWPASSMAHPFASNGQGQGYLHSRR
QSSFLGSHHVGSAPSGNPLDRHFGFFPESPQTSYINPHAFGSGGSSHNSASQVMNIGSLG
AMNMGGALTGNFTGSGSPSSRMMPLTRNGPIFFGNGSYGGAGTVNGEGLIERGRNRKIES
GGNQIDNKKQYQLDLEKIMSGGDTRTTLMIKNIPNKYTSKMLLAAIDESHKSTYDFIYLP
IDFKNKCNVGYAFINMVSPAHIVSFYEAFNGKKWEKFNSEKVASLAYARIQGKVALVTHF
QNSSLMNEDKRCRPILFQSEGQEAADEETLPSSNLNICIRRPDGSYSGDSLDSPTGDLDG
RPELFTGSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400054712
Transcript Infomation

pacid=37480071 locus=PGSC0003DMG400021241 ID=PGSC0003DMT400054712.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGCCTTTAAAGAAACCTATGTCAAACGTCTCTGAAGCTGCTTCAACAAAAACT
CCTTACAAAGAGAAGAATGCTTGGGCCATTCCCCTTGGATCTGCCGCATATCATACATCA
ACTGATACAAGCTTGTTCTCTAGCTCATTGCCTGTGCTACCTCATGCAAAGTTAAACTTC
AATGAGTCCGAGCACTATGGTCAATCCATTGATGATAGCTCACCTAGCTTAAGCAAGCTT
CAATTGGAAGATAAAATTAAAGATCCGTTAGAAGAGGTTGAGTCAAGTCCAGTTGGGTTC
TTGCTTCCAGGGGATGAAGATGAGCTACTAGCAGGCTTAATGGATGACTTTGATCTTAGT
GGATTACCGTCTCAACTGGAGGACTTGGAAGATGATTTTTTTGGCAGTGGAGGACTAGAA
ATGGAACCTGAGGATCAAAATAATTTACTTAATGGTTTTGCAACCTTAAGCATGTACGAT
GGTATTCCTGGAAGCAGTAGTGGACATTATAGTGTTCCAAATGGTGCTGCAACTGTTGTG
GGGGAACACCCATATGGAGAGCATCCATCAAGGACATTATTCGTTCGAAATATTAACAGC
AATGTAGAGGACTCGGAGTTGAAATCTCTCTTTGAGCAATTTGGTGATATCAGAACCCTA
TATACTGCATGCAAGCATAGGGGCTTTGTGATGATATCTTACTATGACATCCGAGCTGCT
CGAACCGCAATGCGTGCTCTACAAAATAAGCCCTTGAGACGAAGAAAGCTCGACATTCAT
TTTTCCATTCCTAAGGAAAATCCATCAGAGAAAGATATTAACCAAGGAACTCTTGTCGTG
TTCAACTTGGATCCATCGGTATCCAATGAGGATCTTCGGCAAATCTTTGGAGTGTATGGG
GAAGTCAAGGAGATCAGAGAGACACCACATAAACGCCATCATAAATTCATCGAATTCTAC
GATGTCAGAGCAGCCGATGCAGCTCTTAAAGCATTAAATCGTAGTGACATAGCTGGAAAG
CGGATAAAACTTGAACCCAGCCGGCCTGGTGGAGCCCGTCGAAATTTGATGCAGCAACTA
ACTCAAGAATTGGAACACGATGAAATTCGATCATTTAGGCACTCAGTTGGATCACCGGTT
GCCAGCTCTCCTCCAGGCAGCTGGTCAAACTTCGGCAGTCCAGTTGAACCCAACCCATTG
CGAGGTTATAGTCAATCACCTGGTCTGAGAAATCTCAGCCCTGTAAACGGTAATCTTATG
CCAGGGCTGGCCTCTATTCTTCCTGGACACCTCTCAAGTCCGAAGATTGCACCCATTGGT
AAAGATCCTGCAAGGGTTGGGCATTTGAATCAGGTAACTTCTAGTCCAAAGTCGTCGCAA
GGAGTGGGTTATCAGCATTCTTTTTCAGTCCCTGAGCAGAAACCAGCTTTAAGCATGGGA
TCTACGCCATTTGGTAACTCTAAGGCATCCGGTACTGGAACACTTTCTGGTCCACAGTTT
CTGTGGGGTAGTCCCCCTATTCACTCAGAGCGTTCTGACTCTCCTATCTGGCCAGCTTCA
TCAATGGCACATCCATTCGCATCAAATGGACAAGGACAAGGCTATCTCCATTCACGTAGG
CAAAGCTCTTTCCTTGGATCACATCACGTGGGGTCTGCTCCATCCGGAAATCCTCTGGAT
AGGCATTTTGGTTTTTTCCCGGAATCTCCTCAAACATCATATATAAACCCACATGCATTT
GGCAGTGGAGGTTCTAGTCATAACAGTGCAAGTCAGGTGATGAATATAGGTAGCCTTGGA
GCAATGAACATGGGTGGTGCTCTTACTGGGAACTTTACTGGAAGTGGTTCTCCTAGCTCT
AGAATGATGCCATTGACAAGGAATGGACCTATATTTTTCGGAAATGGTTCATATGGAGGA
GCAGGAACAGTTAATGGTGAAGGACTGATTGAACGTGGTCGAAATCGAAAAATTGAAAGT
GGTGGTAATCAGATTGACAACAAGAAACAGTATCAGCTTGATTTGGAGAAGATCATGAGT
GGAGGAGATACAAGGACCACCTTGATGATTAAGAACATCCCAAACAAGTACACTTCAAAG
ATGCTACTTGCAGCAATTGATGAGTCTCATAAGAGTACATACGATTTCATCTATTTGCCA
ATTGATTTCAAGAATAAATGTAATGTTGGTTATGCCTTCATTAACATGGTGTCTCCTGCA
CATATCGTCTCCTTTTATGAGGCATTCAATGGAAAGAAGTGGGAAAAGTTTAACAGTGAA
AAAGTTGCATCATTGGCTTATGCACGTATCCAGGGAAAGGTAGCTCTGGTTACTCACTTC
CAGAACTCAAGCTTGATGAATGAAGACAAAAGATGCCGACCAATTCTTTTCCAGTCAGAG
GGCCAAGAGGCAGCTGATGAGGAAACGTTGCCATCCAGCAATCTGAATATATGTATCCGC
CGGCCTGATGGGTCATATTCAGGAGATTCTCTTGATAGCCCAACAGGCGATCTAGATGGG
AGACCAGAGCTATTCACCGGAAGCAGCTGA