Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054669
CDS Infomation

pacid=37425409 polypeptide=PGSC0003DMP400036770 locus=PGSC0003DMG400021213 ID=PGSC0003DMT400054669.v4.03 annot-version=v4.03
Sequence

ATGGACCGTGGGAACTACCGACGTGGTGGCGGTGATGATAACGCCGGCAGAGGTGGAGGT
AACCGTGGTCGTGGTCGTGGTCAAGGACAAGGCCGTGGTGGTGGTGGAAGGGGTGAGCCT
CAGATCGGAGGTGGAAGGGGTGGCCCCCAGGTCGGTGGTGGAAGGGGTGGGCCCCAAATG
GGTCAGCCTCCACAGCAATGGGGGAATCAGCCAAGGGGATCGGGTCAGTATCAGATTCGT
GGGGCTCCGCAAAATCAGCCGGGTCAGAACTATCCGGTTAGTCAGAATCCGGGTCGTGGC
GGTACTTGGGTCAACCAACCGGTCCAACGTGGTGGTGGTGGTAGCGCTTGGCCACGGCCA
CAACAGCAGGGTAGTGGCGTTCCAAACACTGCTTGGGCCCGACCACCACCGCAGCAGCCA
CAGCAACAGGGTAGTGGCAGCGGAGTTGCTACTGCTTGGGCGCGGCCACCGCCGCAGAGG
AGTCAGGAACATGGTGGTGGAAATCAGCAGCACCAGGTTGTAGATCGTCCTCCTCCTCAA
TCTTCTGATCCTGTTCAAGTTGATCTGGGGTCCCTGAAAATTACAGATCAGAGTCCATCA
TCTCCTCCAAAAAGTTGCAAGGAAAAACGTGTACCTATTGCACGACCTGATACTGGAAAA
ATTGCCGTCAAGTCAATTACGCTGCTTGCTAATCATTTTCCTGTTAGATTTAATCCCCAG
ACTACCATTATGCATTATGATGTGGATATTCAACAGAAGGCTGATGGGAATCGGCCTGTG
AAGAAGCTAACAAACAAGTCTGTTCTCCATATGATAAGAGAAAAGTTGTGTACGGATGAC
CCTACTCGATTTCCCATAGATAAAACTGCATATGACGGTAAGAAGAACATTTTCAGTGCT
GTTCAACTTCCTACTGGGTGTTTTGCTGTGAACTGGTCTGACGGGGAAGATGTTAAGTTA
CGCTCTTATGACATTACCATCAAGCTTGTTGCTGAATTAAAACTTTGCAAGTTGAAAGAA
TATTTGAGTGGAAGCCTATCACATATTCCTCGTGATATACTACAAGGAATGGAGTTGGTT
ATGAAAGAAAATCCTACTAGGTGCAGGACTTCTGTAGGTCGTTGTTTCTACTCTAATGAG
CACCTGGCTGACCATGACTTTCGTTTTGGTGTTGCTGCATATAGAGGTTTTCAGCAGAGC
CTAAAGCCTACATCTGGAGGGCTTGCGTTGTGCTTAGATTACTCAGTCTTGGCACTCCGG
AAACCAATGCCAGTGCTAGATTTTCTGAAGGAATATTTAGGAGAATCTAACGAAAATACT
TTCAGGAACAACATTCGAGCTGCAAAGGGTGCATTGGTTGGTTTGAAAGTCAGGGTAATT
CATCGTCGTACAAGCCAGAAGTTTCTTATTAAGCAGCTAACTGACTGCAAGACTCGTGAA
ATTACTTTTCCCCTTGAAGATCCAGAAGGCAAAGATCCCCCAAGGGATGTTTATCTTGTT
GACTACTTCAGGGATAAATATCAGCGGGAGATTAGGTTCAAGGATTTTCCTTCATTAGAT
ATTGGAAAAGGTAATAAGAAAAACTATGTCCCGATGGAATTCTGTGTCTTGGTTGAGGGA
CAACGGTATCCTAAGGAGGATTTGGATAAGGATACTGCCTTGTTTTTGAAGAACATATCA
CTAGCTCGACCCCAAGAGAGAAGGGAGGCAATTTGTGAAATGGTACGGGCTGAAGATGGG
CCGTGCGGGGATATCACCCGTAATTTTGAGATTGGAGTTGATAGGAACATGACCCGTGTT
CCGGGTCGTATTCTTCCTCCCCCTGATTTGAAGCTAGGCGGTCAAAGTCGACTTCCTGTG
AATGATAAATGCCAGTGGAATCTTGTTGGGAAATCTGTGGTGGAAGGCAAGGCGCTTCAA
CGATGGGCTTTGATAGATTTTAGCTCTCAGGATCGCAAACCCTTCTTTAGGCTACGAGTT
GATGAATTTGTCTTCAGATTGAAAGATCGGTGCAGAAAGTTGAGTATTAATATGGAAGAA
CCTGCTGTAGTACATTTTACTGACATGAATGAACTCTCTGCAGTTGGCAAGGTTGAAAAT
CTCCTCAAAGGTGTGGTTGCTGCAGCTGACCAGGAAATCAAGGGTAAACTTCAAATGATA
GTTTGTGTTATGACATCAAAGCATAATGGGTACAAATATCTTAAATGGGTATCTGAGACA
AAAATTGGCGTAGTAACCCAGTGTTGCTTGTCTCCTAATGCCAACAAGGGACAGGATCAA
TATCTTGCAAACCTCTGTATGAAGATAAATGCAAAACTTGGGGGCAGCAATATGGAACTT
ATGGATAGACTCCCTAATTTTGGAAGTGAAGACAATGTCATGTTCATTGGAGCTGATGTT
AATCATCCTGCTGCAAAGAATGTGACATGTCCATCCATAGCAGCTGTTGTTGCCACCGTC
AACTGGCCAGCTGCTAATAAATATGCCGCTAGAGTTTCTCCACAGGAACACAGGACTGAA
AAGATTCTAGAGTTCGGGAAAATGTGTAAAGACCTAGTTCGTACTTATGCGGAACTCAAT
TCGGTTAAACCAAACAAAATTGTTGTTTTCCGTGATGGTGTGAGTGAGGGTCAGTTTGAT
ATGGTACTCAATGAAGAGTTGGTTGATTTGGCGAAGGCTATATACGACAGTAACTATCAA
CCAGCAATCACTCTTGTTGTGGCTCAGAAGAGACACCATACACGACTATTTCCTGAGGGT
GGCCCTGCCAATGTGCCTCCTGGTACTGTTGTGGATACAATAATTGTTCATCCATCTGAT
TTTGACTTCTACCTTTGCAGCCACTTTGGAGGGTTGGGTACCAGCAAGCCAACTCACTAT
CATGTTCTATGGGATGATAATGGTTTCAATTCTGACCGCTTACAGAAGCTTATATACAAC
ATGTGCTTCACTTTTGCACGGTGCACTAAACCGGTTTCACTTGTTCCACCAGTTTACTAT
GCAGACCTTGTTGCTTACAGGGGACGGATGTTCCAAGAGGTGCTTATGGAGATGAACTCT
CCTAGGTCTACAACTTCATCTTCTCCAACTGCCTCATTTCAACAAAGATTTTATGATTTG
CACCCTGATTTGCAGGACATAATGTTTTTCGTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036770
PEP Infomation

pacid=37425409 transcript=PGSC0003DMT400054669 locus=PGSC0003DMG400021213 ID=PGSC0003DMT400054669.v4.03 annot-version=v4.03
Sequence

MDRGNYRRGGGDDNAGRGGGNRGRGRGQGQGRGGGGRGEPQIGGGRGGPQVGGGRGGPQM
GQPPQQWGNQPRGSGQYQIRGAPQNQPGQNYPVSQNPGRGGTWVNQPVQRGGGGSAWPRP
QQQGSGVPNTAWARPPPQQPQQQGSGSGVATAWARPPPQRSQEHGGGNQQHQVVDRPPPQ
SSDPVQVDLGSLKITDQSPSSPPKSCKEKRVPIARPDTGKIAVKSITLLANHFPVRFNPQ
TTIMHYDVDIQQKADGNRPVKKLTNKSVLHMIREKLCTDDPTRFPIDKTAYDGKKNIFSA
VQLPTGCFAVNWSDGEDVKLRSYDITIKLVAELKLCKLKEYLSGSLSHIPRDILQGMELV
MKENPTRCRTSVGRCFYSNEHLADHDFRFGVAAYRGFQQSLKPTSGGLALCLDYSVLALR
KPMPVLDFLKEYLGESNENTFRNNIRAAKGALVGLKVRVIHRRTSQKFLIKQLTDCKTRE
ITFPLEDPEGKDPPRDVYLVDYFRDKYQREIRFKDFPSLDIGKGNKKNYVPMEFCVLVEG
QRYPKEDLDKDTALFLKNISLARPQERREAICEMVRAEDGPCGDITRNFEIGVDRNMTRV
PGRILPPPDLKLGGQSRLPVNDKCQWNLVGKSVVEGKALQRWALIDFSSQDRKPFFRLRV
DEFVFRLKDRCRKLSINMEEPAVVHFTDMNELSAVGKVENLLKGVVAAADQEIKGKLQMI
VCVMTSKHNGYKYLKWVSETKIGVVTQCCLSPNANKGQDQYLANLCMKINAKLGGSNMEL
MDRLPNFGSEDNVMFIGADVNHPAAKNVTCPSIAAVVATVNWPAANKYAARVSPQEHRTE
KILEFGKMCKDLVRTYAELNSVKPNKIVVFRDGVSEGQFDMVLNEELVDLAKAIYDSNYQ
PAITLVVAQKRHHTRLFPEGGPANVPPGTVVDTIIVHPSDFDFYLCSHFGGLGTSKPTHY
HVLWDDNGFNSDRLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRMFQEVLMEMNS
PRSTTSSSPTASFQQRFYDLHPDLQDIMFFV*

Transcript Sequence

Transcript ID

PGSC0003DMT400054669
Transcript Infomation

pacid=37425409 locus=PGSC0003DMG400021213 ID=PGSC0003DMT400054669.v4.03 annot-version=v4.03
Sequence

ATGGACCGTGGGAACTACCGACGTGGTGGCGGTGATGATAACGCCGGCAGAGGTGGAGGT
AACCGTGGTCGTGGTCGTGGTCAAGGACAAGGCCGTGGTGGTGGTGGAAGGGGTGAGCCT
CAGATCGGAGGTGGAAGGGGTGGCCCCCAGGTCGGTGGTGGAAGGGGTGGGCCCCAAATG
GGTCAGCCTCCACAGCAATGGGGGAATCAGCCAAGGGGATCGGGTCAGTATCAGATTCGT
GGGGCTCCGCAAAATCAGCCGGGTCAGAACTATCCGGTTAGTCAGAATCCGGGTCGTGGC
GGTACTTGGGTCAACCAACCGGTCCAACGTGGTGGTGGTGGTAGCGCTTGGCCACGGCCA
CAACAGCAGGGTAGTGGCGTTCCAAACACTGCTTGGGCCCGACCACCACCGCAGCAGCCA
CAGCAACAGGGTAGTGGCAGCGGAGTTGCTACTGCTTGGGCGCGGCCACCGCCGCAGAGG
AGTCAGGAACATGGTGGTGGAAATCAGCAGCACCAGGTTGTAGATCGTCCTCCTCCTCAA
TCTTCTGATCCTGTTCAAGTTGATCTGGGGTCCCTGAAAATTACAGATCAGAGTCCATCA
TCTCCTCCAAAAAGTTGCAAGGAAAAACGTGTACCTATTGCACGACCTGATACTGGAAAA
ATTGCCGTCAAGTCAATTACGCTGCTTGCTAATCATTTTCCTGTTAGATTTAATCCCCAG
ACTACCATTATGCATTATGATGTGGATATTCAACAGAAGGCTGATGGGAATCGGCCTGTG
AAGAAGCTAACAAACAAGTCTGTTCTCCATATGATAAGAGAAAAGTTGTGTACGGATGAC
CCTACTCGATTTCCCATAGATAAAACTGCATATGACGGTAAGAAGAACATTTTCAGTGCT
GTTCAACTTCCTACTGGGTGTTTTGCTGTGAACTGGTCTGACGGGGAAGATGTTAAGTTA
CGCTCTTATGACATTACCATCAAGCTTGTTGCTGAATTAAAACTTTGCAAGTTGAAAGAA
TATTTGAGTGGAAGCCTATCACATATTCCTCGTGATATACTACAAGGAATGGAGTTGGTT
ATGAAAGAAAATCCTACTAGGTGCAGGACTTCTGTAGGTCGTTGTTTCTACTCTAATGAG
CACCTGGCTGACCATGACTTTCGTTTTGGTGTTGCTGCATATAGAGGTTTTCAGCAGAGC
CTAAAGCCTACATCTGGAGGGCTTGCGTTGTGCTTAGATTACTCAGTCTTGGCACTCCGG
AAACCAATGCCAGTGCTAGATTTTCTGAAGGAATATTTAGGAGAATCTAACGAAAATACT
TTCAGGAACAACATTCGAGCTGCAAAGGGTGCATTGGTTGGTTTGAAAGTCAGGGTAATT
CATCGTCGTACAAGCCAGAAGTTTCTTATTAAGCAGCTAACTGACTGCAAGACTCGTGAA
ATTACTTTTCCCCTTGAAGATCCAGAAGGCAAAGATCCCCCAAGGGATGTTTATCTTGTT
GACTACTTCAGGGATAAATATCAGCGGGAGATTAGGTTCAAGGATTTTCCTTCATTAGAT
ATTGGAAAAGGTAATAAGAAAAACTATGTCCCGATGGAATTCTGTGTCTTGGTTGAGGGA
CAACGGTATCCTAAGGAGGATTTGGATAAGGATACTGCCTTGTTTTTGAAGAACATATCA
CTAGCTCGACCCCAAGAGAGAAGGGAGGCAATTTGTGAAATGGTACGGGCTGAAGATGGG
CCGTGCGGGGATATCACCCGTAATTTTGAGATTGGAGTTGATAGGAACATGACCCGTGTT
CCGGGTCGTATTCTTCCTCCCCCTGATTTGAAGCTAGGCGGTCAAAGTCGACTTCCTGTG
AATGATAAATGCCAGTGGAATCTTGTTGGGAAATCTGTGGTGGAAGGCAAGGCGCTTCAA
CGATGGGCTTTGATAGATTTTAGCTCTCAGGATCGCAAACCCTTCTTTAGGCTACGAGTT
GATGAATTTGTCTTCAGATTGAAAGATCGGTGCAGAAAGTTGAGTATTAATATGGAAGAA
CCTGCTGTAGTACATTTTACTGACATGAATGAACTCTCTGCAGTTGGCAAGGTTGAAAAT
CTCCTCAAAGGTGTGGTTGCTGCAGCTGACCAGGAAATCAAGGGTAAACTTCAAATGATA
GTTTGTGTTATGACATCAAAGCATAATGGGTACAAATATCTTAAATGGGTATCTGAGACA
AAAATTGGCGTAGTAACCCAGTGTTGCTTGTCTCCTAATGCCAACAAGGGACAGGATCAA
TATCTTGCAAACCTCTGTATGAAGATAAATGCAAAACTTGGGGGCAGCAATATGGAACTT
ATGGATAGACTCCCTAATTTTGGAAGTGAAGACAATGTCATGTTCATTGGAGCTGATGTT
AATCATCCTGCTGCAAAGAATGTGACATGTCCATCCATAGCAGCTGTTGTTGCCACCGTC
AACTGGCCAGCTGCTAATAAATATGCCGCTAGAGTTTCTCCACAGGAACACAGGACTGAA
AAGATTCTAGAGTTCGGGAAAATGTGTAAAGACCTAGTTCGTACTTATGCGGAACTCAAT
TCGGTTAAACCAAACAAAATTGTTGTTTTCCGTGATGGTGTGAGTGAGGGTCAGTTTGAT
ATGGTACTCAATGAAGAGTTGGTTGATTTGGCGAAGGCTATATACGACAGTAACTATCAA
CCAGCAATCACTCTTGTTGTGGCTCAGAAGAGACACCATACACGACTATTTCCTGAGGGT
GGCCCTGCCAATGTGCCTCCTGGTACTGTTGTGGATACAATAATTGTTCATCCATCTGAT
TTTGACTTCTACCTTTGCAGCCACTTTGGAGGGTTGGGTACCAGCAAGCCAACTCACTAT
CATGTTCTATGGGATGATAATGGTTTCAATTCTGACCGCTTACAGAAGCTTATATACAAC
ATGTGCTTCACTTTTGCACGGTGCACTAAACCGGTTTCACTTGTTCCACCAGTTTACTAT
GCAGACCTTGTTGCTTACAGGGGACGGATGTTCCAAGAGGTGCTTATGGAGATGAACTCT
CCTAGGTCTACAACTTCATCTTCTCCAACTGCCTCATTTCAACAAAGATTTTATGATTTG
CACCCTGATTTGCAGGACATAATGTTTTTCGTCTGA