Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054660
CDS Infomation

pacid=37424820 polypeptide=PGSC0003DMP400036767 locus=PGSC0003DMG400021210 ID=PGSC0003DMT400054660.v4.03 annot-version=v4.03
Sequence

ATGGGAAGTTCTGCTGAACCATCATCTTCTATAAGCTTTACTTCAACTTCCAACACGTCG
AATGGGTCCATTGGCATAGGCCAAAACACATGTGCTTGTGGTGGATCTGAGACAGGGAGT
AGTAATGAAATCATCAGCTTAAGTAAACTCAGTAATAATTTAGAGCAACTCTTGTTAGAT
TCCAGCTCTGAGTTTAGTGATGCTGAGATTGTTGTTGAGGGTGATTCACTTGGTGTTCAT
CGTTGTATATTAGCTGCCAGGAGTAGTTTTTTTCGGGATCTTTTTAGGAACGAAAACGGA
AATTGTGGAAAGGAAGGTAAGCCAAGTTACTCTATGATTGATATATTGCCTTGTGGTAAG
GTTGGATATGAGGCTTTCCGTACTTTCTTAAGCTATTTGTACTCGGGAAAATTGAAGCAT
TTCCCTCCAGAGGCATCAACGTGTGTCGACAGTTTATGTTCCCATGACTTTTGCAGACCA
GCAATCAATTTTCATGTTGAGTTGATGTATGCCTCTTTCGTGTTTCAGGTTCCAGAGCTG
GTGTCACTTTTTCTGCGACGCCTTATCAGTTTTGTCGGGAAGGCTGTTCTGGAAGATGTT
ATCCCAATACTTGGAGTTGCTTTCCATTGCCAATTGAGCGAGCTTCTCACTCATTGTGTT
GATAGAGTAGCGCGATCAGATCTTGAAAGCACATGTATTGAGAAGGAGGTTCCCTTTAAA
GTTGCAGAGAGTATTAAGTTATCGCAGCTGAAATGTCAGGGTGATGAAAGTAAGGTTCTA
CCCGTGGATCCGTTGCATGAAAAGAGAAAAAATAGGATATACAAGGCATTGGATTCGGAT
GATGTTGAACTTGTCAAGCTTCTACTTAATGAGTCTGACATAAGTTTAGATGGAGCCTAC
GCTCTTCATTACGCTGTTGCATATTGTGACCCCAAGGTTGTTACTGAGGTTCTTGGACTG
GGTGTTGCTAATGTCAACCTTCGGAATACACGTGGTTACACTGTGCTTCACATTGCTGCC
ATGCGTAAGGAACCCTCAATCATTGTATCACTTTTGACTAAGGGAGCTCATGCATCAGAA
ATTACATTGGATGGGCAGAGTGCTGTTAGCATCTGTAGGAGGCTGACTAGGCCTAAGGAG
TACCATGCAAAAACAGAACAAGGCCAGGAAGCAAACAAAGATCGGGTATGTATTGATGTT
TTGGAGAGAGAGATGCGTCGCAACCCAATGACCAGAGATGCATTATTTTCTTCCCCCATG
TTGGCCGATGATCTGCCCATGAAACTGCTCTACCTGGAAAACAGAGTGGCATTTGCACGA
TTATTGTTCCCTCTTGAAGCCAAACTAGCCATGGAAATTGCAACTGCTGAGACAACAGCT
GAATTCGCGGATCATTTGGCATCTAAAGGTTCATCTGGAAACTTGAGGGAGGTTGATCTG
AATGAGACACCCATAATGCAGAAAGAAAGACTCTCGAAGACAGTTGAGCTGGGCAAACGC
TACTTTCCTCATTGCTCCCAAGTTCTGGATAAGTTTATGGAGGATGACTTACCCGACTTT
ATTTTCCTTGAGAAGGGCACTCCAGAGGAACAAAAGATCAAGAGGCGGCGATTTAAGGAG
CTCAAAGATGATGTTCAAAGGGCATTTAACAAAGACAAGGCTGGCCTTCATTGCTCTGGC
TTGTCTTCCTCATCATCTTCCACAACTTTTAAAGACGGTGCAAGTGTCAAAGCTAGGAAC
CTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400036767
PEP Infomation

pacid=37424820 transcript=PGSC0003DMT400054660 locus=PGSC0003DMG400021210 ID=PGSC0003DMT400054660.v4.03 annot-version=v4.03
Sequence

MGSSAEPSSSISFTSTSNTSNGSIGIGQNTCACGGSETGSSNEIISLSKLSNNLEQLLLD
SSSEFSDAEIVVEGDSLGVHRCILAARSSFFRDLFRNENGNCGKEGKPSYSMIDILPCGK
VGYEAFRTFLSYLYSGKLKHFPPEASTCVDSLCSHDFCRPAINFHVELMYASFVFQVPEL
VSLFLRRLISFVGKAVLEDVIPILGVAFHCQLSELLTHCVDRVARSDLESTCIEKEVPFK
VAESIKLSQLKCQGDESKVLPVDPLHEKRKNRIYKALDSDDVELVKLLLNESDISLDGAY
ALHYAVAYCDPKVVTEVLGLGVANVNLRNTRGYTVLHIAAMRKEPSIIVSLLTKGAHASE
ITLDGQSAVSICRRLTRPKEYHAKTEQGQEANKDRVCIDVLEREMRRNPMTRDALFSSPM
LADDLPMKLLYLENRVAFARLLFPLEAKLAMEIATAETTAEFADHLASKGSSGNLREVDL
NETPIMQKERLSKTVELGKRYFPHCSQVLDKFMEDDLPDFIFLEKGTPEEQKIKRRRFKE
LKDDVQRAFNKDKAGLHCSGLSSSSSSTTFKDGASVKARNL*

Transcript Sequence

Transcript ID

PGSC0003DMT400054660
Transcript Infomation

pacid=37424820 locus=PGSC0003DMG400021210 ID=PGSC0003DMT400054660.v4.03 annot-version=v4.03
Sequence

ATGGGAAGTTCTGCTGAACCATCATCTTCTATAAGCTTTACTTCAACTTCCAACACGTCG
AATGGGTCCATTGGCATAGGCCAAAACACATGTGCTTGTGGTGGATCTGAGACAGGGAGT
AGTAATGAAATCATCAGCTTAAGTAAACTCAGTAATAATTTAGAGCAACTCTTGTTAGAT
TCCAGCTCTGAGTTTAGTGATGCTGAGATTGTTGTTGAGGGTGATTCACTTGGTGTTCAT
CGTTGTATATTAGCTGCCAGGAGTAGTTTTTTTCGGGATCTTTTTAGGAACGAAAACGGA
AATTGTGGAAAGGAAGGTAAGCCAAGTTACTCTATGATTGATATATTGCCTTGTGGTAAG
GTTGGATATGAGGCTTTCCGTACTTTCTTAAGCTATTTGTACTCGGGAAAATTGAAGCAT
TTCCCTCCAGAGGCATCAACGTGTGTCGACAGTTTATGTTCCCATGACTTTTGCAGACCA
GCAATCAATTTTCATGTTGAGTTGATGTATGCCTCTTTCGTGTTTCAGGTTCCAGAGCTG
GTGTCACTTTTTCTGCGACGCCTTATCAGTTTTGTCGGGAAGGCTGTTCTGGAAGATGTT
ATCCCAATACTTGGAGTTGCTTTCCATTGCCAATTGAGCGAGCTTCTCACTCATTGTGTT
GATAGAGTAGCGCGATCAGATCTTGAAAGCACATGTATTGAGAAGGAGGTTCCCTTTAAA
GTTGCAGAGAGTATTAAGTTATCGCAGCTGAAATGTCAGGGTGATGAAAGTAAGGTTCTA
CCCGTGGATCCGTTGCATGAAAAGAGAAAAAATAGGATATACAAGGCATTGGATTCGGAT
GATGTTGAACTTGTCAAGCTTCTACTTAATGAGTCTGACATAAGTTTAGATGGAGCCTAC
GCTCTTCATTACGCTGTTGCATATTGTGACCCCAAGGTTGTTACTGAGGTTCTTGGACTG
GGTGTTGCTAATGTCAACCTTCGGAATACACGTGGTTACACTGTGCTTCACATTGCTGCC
ATGCGTAAGGAACCCTCAATCATTGTATCACTTTTGACTAAGGGAGCTCATGCATCAGAA
ATTACATTGGATGGGCAGAGTGCTGTTAGCATCTGTAGGAGGCTGACTAGGCCTAAGGAG
TACCATGCAAAAACAGAACAAGGCCAGGAAGCAAACAAAGATCGGGTATGTATTGATGTT
TTGGAGAGAGAGATGCGTCGCAACCCAATGACCAGAGATGCATTATTTTCTTCCCCCATG
TTGGCCGATGATCTGCCCATGAAACTGCTCTACCTGGAAAACAGAGTGGCATTTGCACGA
TTATTGTTCCCTCTTGAAGCCAAACTAGCCATGGAAATTGCAACTGCTGAGACAACAGCT
GAATTCGCGGATCATTTGGCATCTAAAGGTTCATCTGGAAACTTGAGGGAGGTTGATCTG
AATGAGACACCCATAATGCAGAAAGAAAGACTCTCGAAGACAGTTGAGCTGGGCAAACGC
TACTTTCCTCATTGCTCCCAAGTTCTGGATAAGTTTATGGAGGATGACTTACCCGACTTT
ATTTTCCTTGAGAAGGGCACTCCAGAGGAACAAAAGATCAAGAGGCGGCGATTTAAGGAG
CTCAAAGATGATGTTCAAAGGGCATTTAACAAAGACAAGGCTGGCCTTCATTGCTCTGGC
TTGTCTTCCTCATCATCTTCCACAACTTTTAAAGACGGTGCAAGTGTCAAAGCTAGGAAC
CTATGA