Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054611
CDS Infomation

pacid=37428239 polypeptide=PGSC0003DMP400036743 locus=PGSC0003DMG402021193 ID=PGSC0003DMT400054611.v4.03 annot-version=v4.03
Sequence

ATGAAGAACCTGAAAAAGAAGAAAGCTTCAGCTCAAAACACCCAGAAGGGTAGTAAGAAG
AGATTTTCAGTTGAAAGCGACCCATTTTTCAATGAAGACAACGACTTGAAAAGGCGAAAG
AGATTTGGAGATGATGAAGATATTGAGAGCAGTGATGATTCAGAGGACATTTATGGGTCT
GATGATGAAGGAGTGGATAGGAATGAGAGGAAGGATGAAGAAGAGGAGGAGGAGGAGGAG
ACGGCAGCTGAGAAGAGAAAGAGGCTGGCGGAGACATTTTTGCATAGTATGAGGGAGTCG
AAGAGGAAGGAAGAGGAAGAAAGAGAGAGTGGAGAGGAATATGATAGAGAGGAGAGGGAA
GCAATGAGAGACTCATGGATGGTAGACATGTTGCAGAAGGAGCAGATGGAGGGCAGTGGT
CGTTCCAGAAAAGCTATTGCTTCCAGGATTCAAAAGCCTACTGAGGGATTTCACCTTTTA
GTGAAACATCGACAGTCTGTAACTGCTGTGACTTTATCTGATGATGACTTAAAGGGATTT
TCATCTTCTAAAGATGGTACTATTGTTAGCTGGGACGTGGACAGTGGAAAGACAGAAAAG
TATGCATGGCCTACTGATGAAGCTTTGAAATCACATGGTGCAAAGGAGCCACAAGGTCGG
GCAACAAAACATAGTAAGCATGTTTTAGCTTTGGCTGTCAGTTCTGATGGACGCTATTTG
GCAAGTGGAGGCTTGGACCGTCACATTCATTTGTGGGATGTCCGAACACGGCAGCATATT
AAGGCATTCCCTGGTCATAAGGGACCTGTTTCATGTTTGACATTCAGACAAGGATCTTCT
GAACTGTTTTCAGGGTCGTTTGATCGATCCATCAAGATATGGAATGTCGAAGATAGAGCT
TATGTAAATACTTTATTTGGTCATCAAAGTGAAGTTCTAACCATTGATTCTTTGAGGAAA
GAAAGGGTTTTGACAGTTGGACGAGACCGAACCATGCACTTATGGAAGGTTCCAGAGGAA
TCTCAATTGATATTTCGTGCTCCAGCAACTTCCCTTGAATGCTGTTGTTTCATCAATAAT
GATGAGTTTCTATCTGGTTCTGATGATGGAAGTATTGAGCACTGGAACGTAACAAGGAAG
AAGCCTGTCCACATTGTAAAAAATGCACATGCTTCATTGCAATCAGTGGGAATTGAACAG
AGCAATGGGGCACTATCAAATGGCCACATGGAAAATGGCACCCTTAATCCTCAGTGTCAT
TCCTCATCAGCACTCTCTTGGGTTAGTGCGCTGACAGTCTGCAGAAATAGTGATCTTGCA
GCATCAGGAGCTGGCAACGGGTCCGTTCAACTGTGGACAATTGAAAATGAATCAAAAGGC
ATCCGGCCATTGTTTGAGCTCCCAGTGGCTGGATTTATAAATTCCTTAGTTTTTTCAAAA
TCAGGACAGTTCTTGGTTGCTGCAGTAGGGCAGGAACCTCGCCTAGGAAGGTGGGGACGT
ATTGCTGATGTTCGAAATGGAGTTTTTGTGCATCCTTTGAAGCATTCGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036743
PEP Infomation

pacid=37428239 transcript=PGSC0003DMT400054611 locus=PGSC0003DMG402021193 ID=PGSC0003DMT400054611.v4.03 annot-version=v4.03
Sequence

MKNLKKKKASAQNTQKGSKKRFSVESDPFFNEDNDLKRRKRFGDDEDIESSDDSEDIYGS
DDEGVDRNERKDEEEEEEEETAAEKRKRLAETFLHSMRESKRKEEEERESGEEYDREERE
AMRDSWMVDMLQKEQMEGSGRSRKAIASRIQKPTEGFHLLVKHRQSVTAVTLSDDDLKGF
SSSKDGTIVSWDVDSGKTEKYAWPTDEALKSHGAKEPQGRATKHSKHVLALAVSSDGRYL
ASGGLDRHIHLWDVRTRQHIKAFPGHKGPVSCLTFRQGSSELFSGSFDRSIKIWNVEDRA
YVNTLFGHQSEVLTIDSLRKERVLTVGRDRTMHLWKVPEESQLIFRAPATSLECCCFINN
DEFLSGSDDGSIEHWNVTRKKPVHIVKNAHASLQSVGIEQSNGALSNGHMENGTLNPQCH
SSSALSWVSALTVCRNSDLAASGAGNGSVQLWTIENESKGIRPLFELPVAGFINSLVFSK
SGQFLVAAVGQEPRLGRWGRIADVRNGVFVHPLKHS*

Transcript Sequence

Transcript ID

PGSC0003DMT400054611
Transcript Infomation

pacid=37428239 locus=PGSC0003DMG402021193 ID=PGSC0003DMT400054611.v4.03 annot-version=v4.03
Sequence

ATGAAGAACCTGAAAAAGAAGAAAGCTTCAGCTCAAAACACCCAGAAGGGTAGTAAGAAG
AGATTTTCAGTTGAAAGCGACCCATTTTTCAATGAAGACAACGACTTGAAAAGGCGAAAG
AGATTTGGAGATGATGAAGATATTGAGAGCAGTGATGATTCAGAGGACATTTATGGGTCT
GATGATGAAGGAGTGGATAGGAATGAGAGGAAGGATGAAGAAGAGGAGGAGGAGGAGGAG
ACGGCAGCTGAGAAGAGAAAGAGGCTGGCGGAGACATTTTTGCATAGTATGAGGGAGTCG
AAGAGGAAGGAAGAGGAAGAAAGAGAGAGTGGAGAGGAATATGATAGAGAGGAGAGGGAA
GCAATGAGAGACTCATGGATGGTAGACATGTTGCAGAAGGAGCAGATGGAGGGCAGTGGT
CGTTCCAGAAAAGCTATTGCTTCCAGGATTCAAAAGCCTACTGAGGGATTTCACCTTTTA
GTGAAACATCGACAGTCTGTAACTGCTGTGACTTTATCTGATGATGACTTAAAGGGATTT
TCATCTTCTAAAGATGGTACTATTGTTAGCTGGGACGTGGACAGTGGAAAGACAGAAAAG
TATGCATGGCCTACTGATGAAGCTTTGAAATCACATGGTGCAAAGGAGCCACAAGGTCGG
GCAACAAAACATAGTAAGCATGTTTTAGCTTTGGCTGTCAGTTCTGATGGACGCTATTTG
GCAAGTGGAGGCTTGGACCGTCACATTCATTTGTGGGATGTCCGAACACGGCAGCATATT
AAGGCATTCCCTGGTCATAAGGGACCTGTTTCATGTTTGACATTCAGACAAGGATCTTCT
GAACTGTTTTCAGGGTCGTTTGATCGATCCATCAAGATATGGAATGTCGAAGATAGAGCT
TATGTAAATACTTTATTTGGTCATCAAAGTGAAGTTCTAACCATTGATTCTTTGAGGAAA
GAAAGGGTTTTGACAGTTGGACGAGACCGAACCATGCACTTATGGAAGGTTCCAGAGGAA
TCTCAATTGATATTTCGTGCTCCAGCAACTTCCCTTGAATGCTGTTGTTTCATCAATAAT
GATGAGTTTCTATCTGGTTCTGATGATGGAAGTATTGAGCACTGGAACGTAACAAGGAAG
AAGCCTGTCCACATTGTAAAAAATGCACATGCTTCATTGCAATCAGTGGGAATTGAACAG
AGCAATGGGGCACTATCAAATGGCCACATGGAAAATGGCACCCTTAATCCTCAGTGTCAT
TCCTCATCAGCACTCTCTTGGGTTAGTGCGCTGACAGTCTGCAGAAATAGTGATCTTGCA
GCATCAGGAGCTGGCAACGGGTCCGTTCAACTGTGGACAATTGAAAATGAATCAAAAGGC
ATCCGGCCATTGTTTGAGCTCCCAGTGGCTGGATTTATAAATTCCTTAGTTTTTTCAAAA
TCAGGACAGTTCTTGGTTGCTGCAGTAGGGCAGGAACCTCGCCTAGGAAGGTGGGGACGT
ATTGCTGATGTTCGAAATGGAGTTTTTGTGCATCCTTTGAAGCATTCGTGA