Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054599
CDS Infomation

pacid=37429157 polypeptide=PGSC0003DMP400036732 locus=PGSC0003DMG400021186 ID=PGSC0003DMT400054599.v4.03 annot-version=v4.03
Sequence

ATGAAAGTCAAAGGGAGGGAGGTGTTTGTGATAATTCCTCTTTTGGTATTAGTTGTGTTT
GTTGAAATTGGGGAAGCTCAAACAAAGACTTTGCTGGTAAATTGTGGTACAAATTCTAGT
GTGAATGCAGATGGTAGCAAATGGATAGGTGATTCTGATCCTGGTAGTAATGTCACTTTG
AGTTCATCAGGTATTGAGGCATCTACTGACTCATTTAATGGTGATCCATCTTATGAGTCA
CTCTACAAAACTGCCAGATTTTTTTCGGAAAGTTTTAACTATACTTTCAAAGGATCACCT
GGTAGTTATTTCCTTAGGCTCCATTTCTATCCCTTTACATTTAGGAATCGCGATGCGAAT
GAGTCGTATTTTGCTGTTGCTGCAAATGGTTTGAAGTTGGTTTCGGAGTTTAATGTTGCT
GGTGAGATTTTGCTCAAGAACTCGCTCTTGGAAGGTTCTGGAGGCAACTCCAGTATCTTT
TCATTGGTGAAGGAGTATTTTGTGACTTCTGATATCGATGTCTTTGTGCTCGAGTTTATT
CCGAATAAGGATTCATTTGGATTTGTTAATGCCATTGAGATCATCCCTGTGACTGATAAG
CTATTTGTTGACTCCATCAGTAAAGTTGGTGGCAATGGTGCTAACAGTTCTTTAAATTTG
AGTAAACGAGGGATTCAGACTATGTACAGGTTGAACATTGGTGGTTCAGCAATTAAATCC
ACTCAAGATTCAGGGTTCAGGAGGAAGTGGGAGGCAGATTCAAGCTATATGATCATCGCA
GATGCAGGTTCAGAAGCCAAAAACCATTCCAACATTACTTATGCTTCCCCGAATGACACC
TCTGTTGCTCCGCTTCTTGTGTATGAAACAGCAAGAATTATGAGCAACACAGATGTCATG
GAGAAGCGGTTGAACATGTCATGGAAATTAGATGTGGATCCAGATTTTGATTATGTAATC
CGCTTACATTTCTGTGAGTTTGACTATAATAAACCAAATCAAAGGATCTTCAAAATTTAT
ATAAATAACAAAACTGCAGCAGACAACTACGACATTTTCTCAAGAGCTGGGGGAATGAAC
AAGGCATACCATGAGGATTACTTCGATGCGATATCCTCGAAAAGCAGTAGTCTCTGGGTT
CAACTTGGTCCAGATACAACGACTGGTTCTGCAGGCACTGATGCTCTTTTGAATGGTTTG
GAGGTTTTCAAGTTGAGTAGGAATGGTAATCTTGCCTACATACAGAAATATGAGGATGTT
CCAGAAAAATCGACTTCGAAAAATTTAATCCTGTGGGTAGGAATTGGAGCAGGTGTTGCA
TCCATTATCTTTCTTGCAGGATTAGTCATGGTTATTATATGGCTGTGTAGAAGGCAGAGT
AGCAAAGATGACACAAAGAAAACCTCACCTGGATGGAGGCCTTTATTCCTTCATGCAGCT
GCTGTGACCAATACTGGTAATGGTAAGGGATCTATACAATATCAAAATCTTGGAACTCTA
AGATCTGGAAGGCGGTTTACTCTAGCAGAGATTAAAGGAGCTACAAACAACTTTGATGAA
AGCTTAGTGATTGGAGTGGGAGGATTTGGTAAAGTTTTCAAAGCAGAACTCGATGATGGC
ACCCTTGCTGCAATCAAGCGAGCCAATCCTCAATCTCAGCAAGGACTGAAAGAATTTGAA
ACAGAAATCGAAATGCTTTCTAAGCTAAGGCATAGGCATTTGGTCTCCATGATAGGTTTC
TGTGATGAACAAAATGAAATGATTTTGGTCTATGAGTACATGGCCAATGGAACTCTCAGG
AGTCATCTCTTTGGCAGTGATCTACCATCCCTAAGCTGGAAGCAAAGACTAGAGGCGTGC
ATTGGTTCAGCTCGTGGTCTGCATTACCTTCACACAGGGTCAGAGCGGGGAATTATCCAT
AGGGATATCAAGACAACCAACATATTGTTAGACGAGAATTTTGTGGCGAAAATGGCTGAT
TTTGGGCTGTCTAAAACTGGCCCTTCTTTGGAGCATACTCATGTCAGTACAGCAGTGAAA
GGAAGTTTTGGTTATCTGGATCCCGAGTATTTCAGGCGGCAGCAGTTGACTGAGAAATCT
GATGTTTACTCCTTTGGGGTTGTGCTGTTTGAAGTTATATGTGCGCGCCCTGTTATAAAT
CCAAGCTTACCAAGAGATCAGATCAATCTTGCAGAATGGGCTATGCGGTTTCAACGAAAA
AGATCTCTTGAAACCATCATTGACGAACAACTCGCAGGACAATATTCCACAGAATCGTTA
ATGAAATTTGGAGAAATTGCTGAGAAATGTCTGTCAGACGAGGGAAAGTTGAGACCAACA
ATGGGAGAAGTCCTATGGCATCTGGAATATGTTTTGCAAATTCATGAGGCTTGGCTGCGG
AAGAATGCAGGGGAAGACTCTGCTTCTGATATTCGTGTTCTAGAGACTGTTGAGGAGAGA
GGAACTGAAACTTCTGAAGACCAGACTCATGTTGAATCAAAAAACAAAGAAGAGGGTGAA
CCTGCAACAAGTGCCAGTGGCACTACAGATGCCATGGCTAATGGAGTAGATGATTTTTCA
CAATTCCTCGGTCAAAACGGAAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036732
PEP Infomation

pacid=37429157 transcript=PGSC0003DMT400054599 locus=PGSC0003DMG400021186 ID=PGSC0003DMT400054599.v4.03 annot-version=v4.03
Sequence

MKVKGREVFVIIPLLVLVVFVEIGEAQTKTLLVNCGTNSSVNADGSKWIGDSDPGSNVTL
SSSGIEASTDSFNGDPSYESLYKTARFFSESFNYTFKGSPGSYFLRLHFYPFTFRNRDAN
ESYFAVAANGLKLVSEFNVAGEILLKNSLLEGSGGNSSIFSLVKEYFVTSDIDVFVLEFI
PNKDSFGFVNAIEIIPVTDKLFVDSISKVGGNGANSSLNLSKRGIQTMYRLNIGGSAIKS
TQDSGFRRKWEADSSYMIIADAGSEAKNHSNITYASPNDTSVAPLLVYETARIMSNTDVM
EKRLNMSWKLDVDPDFDYVIRLHFCEFDYNKPNQRIFKIYINNKTAADNYDIFSRAGGMN
KAYHEDYFDAISSKSSSLWVQLGPDTTTGSAGTDALLNGLEVFKLSRNGNLAYIQKYEDV
PEKSTSKNLILWVGIGAGVASIIFLAGLVMVIIWLCRRQSSKDDTKKTSPGWRPLFLHAA
AVTNTGNGKGSIQYQNLGTLRSGRRFTLAEIKGATNNFDESLVIGVGGFGKVFKAELDDG
TLAAIKRANPQSQQGLKEFETEIEMLSKLRHRHLVSMIGFCDEQNEMILVYEYMANGTLR
SHLFGSDLPSLSWKQRLEACIGSARGLHYLHTGSERGIIHRDIKTTNILLDENFVAKMAD
FGLSKTGPSLEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVICARPVIN
PSLPRDQINLAEWAMRFQRKRSLETIIDEQLAGQYSTESLMKFGEIAEKCLSDEGKLRPT
MGEVLWHLEYVLQIHEAWLRKNAGEDSASDIRVLETVEERGTETSEDQTHVESKNKEEGE
PATSASGTTDAMANGVDDFSQFLGQNGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400054599
Transcript Infomation

pacid=37429157 locus=PGSC0003DMG400021186 ID=PGSC0003DMT400054599.v4.03 annot-version=v4.03
Sequence

ATGAAAGTCAAAGGGAGGGAGGTGTTTGTGATAATTCCTCTTTTGGTATTAGTTGTGTTT
GTTGAAATTGGGGAAGCTCAAACAAAGACTTTGCTGGTAAATTGTGGTACAAATTCTAGT
GTGAATGCAGATGGTAGCAAATGGATAGGTGATTCTGATCCTGGTAGTAATGTCACTTTG
AGTTCATCAGGTATTGAGGCATCTACTGACTCATTTAATGGTGATCCATCTTATGAGTCA
CTCTACAAAACTGCCAGATTTTTTTCGGAAAGTTTTAACTATACTTTCAAAGGATCACCT
GGTAGTTATTTCCTTAGGCTCCATTTCTATCCCTTTACATTTAGGAATCGCGATGCGAAT
GAGTCGTATTTTGCTGTTGCTGCAAATGGTTTGAAGTTGGTTTCGGAGTTTAATGTTGCT
GGTGAGATTTTGCTCAAGAACTCGCTCTTGGAAGGTTCTGGAGGCAACTCCAGTATCTTT
TCATTGGTGAAGGAGTATTTTGTGACTTCTGATATCGATGTCTTTGTGCTCGAGTTTATT
CCGAATAAGGATTCATTTGGATTTGTTAATGCCATTGAGATCATCCCTGTGACTGATAAG
CTATTTGTTGACTCCATCAGTAAAGTTGGTGGCAATGGTGCTAACAGTTCTTTAAATTTG
AGTAAACGAGGGATTCAGACTATGTACAGGTTGAACATTGGTGGTTCAGCAATTAAATCC
ACTCAAGATTCAGGGTTCAGGAGGAAGTGGGAGGCAGATTCAAGCTATATGATCATCGCA
GATGCAGGTTCAGAAGCCAAAAACCATTCCAACATTACTTATGCTTCCCCGAATGACACC
TCTGTTGCTCCGCTTCTTGTGTATGAAACAGCAAGAATTATGAGCAACACAGATGTCATG
GAGAAGCGGTTGAACATGTCATGGAAATTAGATGTGGATCCAGATTTTGATTATGTAATC
CGCTTACATTTCTGTGAGTTTGACTATAATAAACCAAATCAAAGGATCTTCAAAATTTAT
ATAAATAACAAAACTGCAGCAGACAACTACGACATTTTCTCAAGAGCTGGGGGAATGAAC
AAGGCATACCATGAGGATTACTTCGATGCGATATCCTCGAAAAGCAGTAGTCTCTGGGTT
CAACTTGGTCCAGATACAACGACTGGTTCTGCAGGCACTGATGCTCTTTTGAATGGTTTG
GAGGTTTTCAAGTTGAGTAGGAATGGTAATCTTGCCTACATACAGAAATATGAGGATGTT
CCAGAAAAATCGACTTCGAAAAATTTAATCCTGTGGGTAGGAATTGGAGCAGGTGTTGCA
TCCATTATCTTTCTTGCAGGATTAGTCATGGTTATTATATGGCTGTGTAGAAGGCAGAGT
AGCAAAGATGACACAAAGAAAACCTCACCTGGATGGAGGCCTTTATTCCTTCATGCAGCT
GCTGTGACCAATACTGGTAATGGTAAGGGATCTATACAATATCAAAATCTTGGAACTCTA
AGATCTGGAAGGCGGTTTACTCTAGCAGAGATTAAAGGAGCTACAAACAACTTTGATGAA
AGCTTAGTGATTGGAGTGGGAGGATTTGGTAAAGTTTTCAAAGCAGAACTCGATGATGGC
ACCCTTGCTGCAATCAAGCGAGCCAATCCTCAATCTCAGCAAGGACTGAAAGAATTTGAA
ACAGAAATCGAAATGCTTTCTAAGCTAAGGCATAGGCATTTGGTCTCCATGATAGGTTTC
TGTGATGAACAAAATGAAATGATTTTGGTCTATGAGTACATGGCCAATGGAACTCTCAGG
AGTCATCTCTTTGGCAGTGATCTACCATCCCTAAGCTGGAAGCAAAGACTAGAGGCGTGC
ATTGGTTCAGCTCGTGGTCTGCATTACCTTCACACAGGGTCAGAGCGGGGAATTATCCAT
AGGGATATCAAGACAACCAACATATTGTTAGACGAGAATTTTGTGGCGAAAATGGCTGAT
TTTGGGCTGTCTAAAACTGGCCCTTCTTTGGAGCATACTCATGTCAGTACAGCAGTGAAA
GGAAGTTTTGGTTATCTGGATCCCGAGTATTTCAGGCGGCAGCAGTTGACTGAGAAATCT
GATGTTTACTCCTTTGGGGTTGTGCTGTTTGAAGTTATATGTGCGCGCCCTGTTATAAAT
CCAAGCTTACCAAGAGATCAGATCAATCTTGCAGAATGGGCTATGCGGTTTCAACGAAAA
AGATCTCTTGAAACCATCATTGACGAACAACTCGCAGGACAATATTCCACAGAATCGTTA
ATGAAATTTGGAGAAATTGCTGAGAAATGTCTGTCAGACGAGGGAAAGTTGAGACCAACA
ATGGGAGAAGTCCTATGGCATCTGGAATATGTTTTGCAAATTCATGAGGCTTGGCTGCGG
AAGAATGCAGGGGAAGACTCTGCTTCTGATATTCGTGTTCTAGAGACTGTTGAGGAGAGA
GGAACTGAAACTTCTGAAGACCAGACTCATGTTGAATCAAAAAACAAAGAAGAGGGTGAA
CCTGCAACAAGTGCCAGTGGCACTACAGATGCCATGGCTAATGGAGTAGATGATTTTTCA
CAATTCCTCGGTCAAAACGGAAGGTGA