Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054593
CDS Infomation

pacid=37425333 polypeptide=PGSC0003DMP400036729 locus=PGSC0003DMG402021183 ID=PGSC0003DMT400054593.v4.03 annot-version=v4.03
Sequence

ATGGGATCGGATGAAAATGTAACAGAGACCGCTTATATCCCCATGAAGAATCGCCGACAA
GGAGGCTTTATCCCCACTTTCTTCATATTTGGAATGATGTTGTTGGATAACATAGGATTT
GTGGCAAATATGATAAGTTTTGTTGTATATTTTGCATCAGTTATGCATTTTGATTTAGCT
GGTGCAGCAACTAATACAACAAACTTTTTGGGTACTGCTTTTTTGCTCACTATTTTGGGA
GGCTTCATATCAGATGCATATATGACTCGTCTCAACACTACCTTGCTCTTTGGCATCTTC
CAATTATTGGGATACTTACTATTGATACTCCAATCCCACTTCCAAAAACTTCAACCACAG
CCCTGTGGAGAATCAACTTGCGTTCATGGCGGAAAAGCACTGCTGCTATACACTTCAGTT
TACTTAACGGCATTGGGAGCAGGGGGCATTCGGGGCTGTATTCCGGCATTAGGTGCCGAT
CAATTTGAACAGGACGACCCGAAACAGAGCAGCAAGAACATTTCCAGTTTCTTCAACTGG
TTCTTGTTAAGCATAACTATTGGAGCATCCATTGGAGTTACTATTGTGGTTTGGGTCAGT
ACAAATGTTGGATGGGATAAAGGGTTCATTATCTCTATTGTTTGCTGTTTTGCTGGCCTC
TGTATTGTTTCAATGGGTAAGCCTTTTTATAGAGTGAGAGTTCCTGGTGAAAGTCCCCTG
CTTAGAGTTTTACAGGTTTTGGTAGCAGCAGCTCGAAATTGGTCTGTGCAACTACCAACT
GATAAGCATAAACTATATGAGATACATGACCGAAATGTTTCTCCTTTAACCGAACAGCGC
CTTCCACATACCCAACAATTCAGGCAAGTGTTTCATGTTCAATGCAAGATGAAAAGGTTT
TCATGTTTATCTTATGTTGTCATGTTAATCATGGACAGTGTACTAGACAAAGCTGCAGTT
CAAACGGAGGGCACCAAAAAGCAAGGGAAATGGAGACTGTGTACTGTTACTCAAGTGGAG
GAAGTGAAAATCCTTACCAGGATGATGCCGATTCTCTTGAGTACTATCATCATGAACACA
TGTTTGGCACAGCTACAAACAATCTCAATACAACAAGGGACTCTAATGGATCCTAGCCTT
GGCAAGTTTGACGTACCTGCTGCTTCGATTCCAGTCATTCCTCTTGTATTCATGTCCGTT
CTCATTCCCATCTATGAGTTCCTCTTTGTTCCTGTAATGAGGATTGTAACTGGCCACCCA
ACTGGCATAACACACCTCCAGAGGGTCGGGGTAGGGCTCGTTCTCTCAGCTATCTCCATG
GCCATTGCAGGAGCCGTGGAAGTGAAGAGGAAGAACGAGTTCAACAACCACAACCATCGC
ACCAGCCTCTTCTGGCTCTCCTTTCATTATGCAATCTTTGGGATAGCAGACATGTTCACA
CTCGTTGGACTGATGGAATTCTTCTACTGCGAGGCTCCAGCTGGGATGAGATCTCTCTCC
ACGTCTTTCTCATTTCTGTCACTCTCCATTGGCTACTACTTGAGCTCAGCTTTTGTCGAG
CTCATCAACTCAATCACTTCAAAGCTCACTTCAAACAAGCAAGGATGGCTTCAAGGGAGA
GACATGAACAAGAACCACATCGAGCTTTTCTACTGGTTCCTAGCGATCCTTAGCTTGCTC
AACTTTGGTAACTATGTCTTTTGGGCCAACTGGTACAAGTACACAAAGGATGGTCCTATC
GATGAACAGAAACTTCTTCAACCAGATTTGTCTGTAACTATGAGTATGACCTCACAACAG
ACCATCTCTACAAGTGAAGGTGCAAGAAAAATGGAACAAAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400036729
PEP Infomation

pacid=37425333 transcript=PGSC0003DMT400054593 locus=PGSC0003DMG402021183 ID=PGSC0003DMT400054593.v4.03 annot-version=v4.03
Sequence

MGSDENVTETAYIPMKNRRQGGFIPTFFIFGMMLLDNIGFVANMISFVVYFASVMHFDLA
GAATNTTNFLGTAFLLTILGGFISDAYMTRLNTTLLFGIFQLLGYLLLILQSHFQKLQPQ
PCGESTCVHGGKALLLYTSVYLTALGAGGIRGCIPALGADQFEQDDPKQSSKNISSFFNW
FLLSITIGASIGVTIVVWVSTNVGWDKGFIISIVCCFAGLCIVSMGKPFYRVRVPGESPL
LRVLQVLVAAARNWSVQLPTDKHKLYEIHDRNVSPLTEQRLPHTQQFRQVFHVQCKMKRF
SCLSYVVMLIMDSVLDKAAVQTEGTKKQGKWRLCTVTQVEEVKILTRMMPILLSTIIMNT
CLAQLQTISIQQGTLMDPSLGKFDVPAASIPVIPLVFMSVLIPIYEFLFVPVMRIVTGHP
TGITHLQRVGVGLVLSAISMAIAGAVEVKRKNEFNNHNHRTSLFWLSFHYAIFGIADMFT
LVGLMEFFYCEAPAGMRSLSTSFSFLSLSIGYYLSSAFVELINSITSKLTSNKQGWLQGR
DMNKNHIELFYWFLAILSLLNFGNYVFWANWYKYTKDGPIDEQKLLQPDLSVTMSMTSQQ
TISTSEGARKMEQN*

Transcript Sequence

Transcript ID

PGSC0003DMT400054593
Transcript Infomation

pacid=37425333 locus=PGSC0003DMG402021183 ID=PGSC0003DMT400054593.v4.03 annot-version=v4.03
Sequence

ATGGGATCGGATGAAAATGTAACAGAGACCGCTTATATCCCCATGAAGAATCGCCGACAA
GGAGGCTTTATCCCCACTTTCTTCATATTTGGAATGATGTTGTTGGATAACATAGGATTT
GTGGCAAATATGATAAGTTTTGTTGTATATTTTGCATCAGTTATGCATTTTGATTTAGCT
GGTGCAGCAACTAATACAACAAACTTTTTGGGTACTGCTTTTTTGCTCACTATTTTGGGA
GGCTTCATATCAGATGCATATATGACTCGTCTCAACACTACCTTGCTCTTTGGCATCTTC
CAATTATTGGGATACTTACTATTGATACTCCAATCCCACTTCCAAAAACTTCAACCACAG
CCCTGTGGAGAATCAACTTGCGTTCATGGCGGAAAAGCACTGCTGCTATACACTTCAGTT
TACTTAACGGCATTGGGAGCAGGGGGCATTCGGGGCTGTATTCCGGCATTAGGTGCCGAT
CAATTTGAACAGGACGACCCGAAACAGAGCAGCAAGAACATTTCCAGTTTCTTCAACTGG
TTCTTGTTAAGCATAACTATTGGAGCATCCATTGGAGTTACTATTGTGGTTTGGGTCAGT
ACAAATGTTGGATGGGATAAAGGGTTCATTATCTCTATTGTTTGCTGTTTTGCTGGCCTC
TGTATTGTTTCAATGGGTAAGCCTTTTTATAGAGTGAGAGTTCCTGGTGAAAGTCCCCTG
CTTAGAGTTTTACAGGTTTTGGTAGCAGCAGCTCGAAATTGGTCTGTGCAACTACCAACT
GATAAGCATAAACTATATGAGATACATGACCGAAATGTTTCTCCTTTAACCGAACAGCGC
CTTCCACATACCCAACAATTCAGGCAAGTGTTTCATGTTCAATGCAAGATGAAAAGGTTT
TCATGTTTATCTTATGTTGTCATGTTAATCATGGACAGTGTACTAGACAAAGCTGCAGTT
CAAACGGAGGGCACCAAAAAGCAAGGGAAATGGAGACTGTGTACTGTTACTCAAGTGGAG
GAAGTGAAAATCCTTACCAGGATGATGCCGATTCTCTTGAGTACTATCATCATGAACACA
TGTTTGGCACAGCTACAAACAATCTCAATACAACAAGGGACTCTAATGGATCCTAGCCTT
GGCAAGTTTGACGTACCTGCTGCTTCGATTCCAGTCATTCCTCTTGTATTCATGTCCGTT
CTCATTCCCATCTATGAGTTCCTCTTTGTTCCTGTAATGAGGATTGTAACTGGCCACCCA
ACTGGCATAACACACCTCCAGAGGGTCGGGGTAGGGCTCGTTCTCTCAGCTATCTCCATG
GCCATTGCAGGAGCCGTGGAAGTGAAGAGGAAGAACGAGTTCAACAACCACAACCATCGC
ACCAGCCTCTTCTGGCTCTCCTTTCATTATGCAATCTTTGGGATAGCAGACATGTTCACA
CTCGTTGGACTGATGGAATTCTTCTACTGCGAGGCTCCAGCTGGGATGAGATCTCTCTCC
ACGTCTTTCTCATTTCTGTCACTCTCCATTGGCTACTACTTGAGCTCAGCTTTTGTCGAG
CTCATCAACTCAATCACTTCAAAGCTCACTTCAAACAAGCAAGGATGGCTTCAAGGGAGA
GACATGAACAAGAACCACATCGAGCTTTTCTACTGGTTCCTAGCGATCCTTAGCTTGCTC
AACTTTGGTAACTATGTCTTTTGGGCCAACTGGTACAAGTACACAAAGGATGGTCCTATC
GATGAACAGAAACTTCTTCAACCAGATTTGTCTGTAACTATGAGTATGACCTCACAACAG
ACCATCTCTACAAGTGAAGGTGCAAGAAAAATGGAACAAAACTAA