Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054570
CDS Infomation

pacid=37426451 polypeptide=PGSC0003DMP400036721 locus=PGSC0003DMG400021177 ID=PGSC0003DMT400054570.v4.03 annot-version=v4.03
Sequence

ATGAACAAAGAAGGAAGAGTTGAGGAGGAGGAAGAAGAAGAACAAACCTTCGAAGAATTG
GGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCA
ATTCAGCGAGTTGCTATTCCTCTAATCCTCGAAGGGAAAGATGTGGTTGCTCGAGCTAAG
ACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAG
TCATCTTCAGTCAAGAATCTTGCTCCTACTGCATTGATTCTTGTACCTACAAGGGAATTG
TGTCAACAGGTTTGTTCGGAGGCTAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGG
CTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGAGAACTACGTTGGCGGGGCCT
CCGGAAATTGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATT
CAAGCGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTTGATGAGGCAGATCTTCTT
TTGTCATATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGC
CAGTGCCTTCTGATGTCTGCAACCTCAAGTTCTGACGTTGAAAAGCTGAAGAAGCTTATT
TTACACAATCCCTACATCCTAACCTTGCCTGAGGTGGGAGAAACAAAGGATGACATTATC
CCAAAAAATGTTCAGCAATTTTATATTTCTTGTGCTGCTCGTGATAAGCTTGTCCATATC
CTTGCCCTCTTGAAGCTTGAGTTGGTTCAGAAAAAAGTCTTGATATTTACAAATTCAATT
GACATGAGTTTTAGACTCAAACTATTCTTTGAGCAGTTTGGGATCAAGTCTGCAGTGTTA
AATGCTGAGCTGCCTCAGAGTTCTCGTCTACACATCCTTGAGGAATTTAATGCTGGGCTA
TTTGATTACTTGATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAACAGGTTGATGAT
AAAAATGGCAGTGAGCAAAAAAAATCAAAAAGACATCGAAAGCATAAATTGGATGCAGAG
TTTGGTGTGGTCAGAGGGATAGACTTCAAAAATGTGCATACTGTGATAAATTATGAGATG
CCTCAAACAGCTGCAGGCTATGTACATCGAATTGGACGTACTGGAAGAGCATATAATACT
GGAGCATCTGTCTCTCTTGTTTCTGATGAAGAGACAGAAATATTTGAAGAGATTAAATCT
TTACTGGGGGAAAATGAAGACAAGGTGTCACAGTTTATTGCCCCATTCCCATTGCTGAGT
AAAAATGCAGTGGAGTCTTTGCATTACCGAGCTGAGGATGTTGCAAGGAGTGTTACAAAA
ATTGCAGTAAGAGAATCACGGGCTCAGGATCTGAGGAATGAGATTCTTAATTCTCAAAAA
TTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAGATCTTTTGAAGCATGATAAGATG
TTAAGCAAGAAAGCACCTGCCCCACACCTACGTGATGTACCTGACTACCTATTGGATCCA
ACAACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTAAT
CCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACA
TTTTCAGCTGAGGCACCTAAGCGAGCAGGGAAAGGTGGGATGAAGAGAAAGGTAAAAGAT
ACTGATAATGGCCATAAACAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400036721
PEP Infomation

pacid=37426451 transcript=PGSC0003DMT400054570 locus=PGSC0003DMG400021177 ID=PGSC0003DMT400054570.v4.03 annot-version=v4.03
Sequence

MNKEGRVEEEEEEEQTFEELGLDPRLIRALTKKTIDKPTPIQRVAIPLILEGKDVVARAK
TGSGKTFAYLLPLLHKLFTQSSSVKNLAPTALILVPTRELCQQVCSEANSLIELCRVQLR
LVQLTSSMSVSELRTTLAGPPEIVISTPACIQTCLSNGVIQAKAVQDSLSILILDEADLL
LSYGYEDDLKALTSHVPRRCQCLLMSATSSSDVEKLKKLILHNPYILTLPEVGETKDDII
PKNVQQFYISCAARDKLVHILALLKLELVQKKVLIFTNSIDMSFRLKLFFEQFGIKSAVL
NAELPQSSRLHILEEFNAGLFDYLIATDESQSEGKEQVDDKNGSEQKKSKRHRKHKLDAE
FGVVRGIDFKNVHTVINYEMPQTAAGYVHRIGRTGRAYNTGASVSLVSDEETEIFEEIKS
LLGENEDKVSQFIAPFPLLSKNAVESLHYRAEDVARSVTKIAVRESRAQDLRNEILNSQK
LKAHFQDNPKDLDLLKHDKMLSKKAPAPHLRDVPDYLLDPTTQEASKIVKLARAAMGNTN
PSRGKGSKGRFKRSRDPLKTFSAEAPKRAGKGGMKRKVKDTDNGHKQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400054570
Transcript Infomation

pacid=37426451 locus=PGSC0003DMG400021177 ID=PGSC0003DMT400054570.v4.03 annot-version=v4.03
Sequence

ATGAACAAAGAAGGAAGAGTTGAGGAGGAGGAAGAAGAAGAACAAACCTTCGAAGAATTG
GGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCA
ATTCAGCGAGTTGCTATTCCTCTAATCCTCGAAGGGAAAGATGTGGTTGCTCGAGCTAAG
ACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAG
TCATCTTCAGTCAAGAATCTTGCTCCTACTGCATTGATTCTTGTACCTACAAGGGAATTG
TGTCAACAGGTTTGTTCGGAGGCTAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGG
CTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGAGAACTACGTTGGCGGGGCCT
CCGGAAATTGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATT
CAAGCGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTTGATGAGGCAGATCTTCTT
TTGTCATATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGC
CAGTGCCTTCTGATGTCTGCAACCTCAAGTTCTGACGTTGAAAAGCTGAAGAAGCTTATT
TTACACAATCCCTACATCCTAACCTTGCCTGAGGTGGGAGAAACAAAGGATGACATTATC
CCAAAAAATGTTCAGCAATTTTATATTTCTTGTGCTGCTCGTGATAAGCTTGTCCATATC
CTTGCCCTCTTGAAGCTTGAGTTGGTTCAGAAAAAAGTCTTGATATTTACAAATTCAATT
GACATGAGTTTTAGACTCAAACTATTCTTTGAGCAGTTTGGGATCAAGTCTGCAGTGTTA
AATGCTGAGCTGCCTCAGAGTTCTCGTCTACACATCCTTGAGGAATTTAATGCTGGGCTA
TTTGATTACTTGATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAACAGGTTGATGAT
AAAAATGGCAGTGAGCAAAAAAAATCAAAAAGACATCGAAAGCATAAATTGGATGCAGAG
TTTGGTGTGGTCAGAGGGATAGACTTCAAAAATGTGCATACTGTGATAAATTATGAGATG
CCTCAAACAGCTGCAGGCTATGTACATCGAATTGGACGTACTGGAAGAGCATATAATACT
GGAGCATCTGTCTCTCTTGTTTCTGATGAAGAGACAGAAATATTTGAAGAGATTAAATCT
TTACTGGGGGAAAATGAAGACAAGGTGTCACAGTTTATTGCCCCATTCCCATTGCTGAGT
AAAAATGCAGTGGAGTCTTTGCATTACCGAGCTGAGGATGTTGCAAGGAGTGTTACAAAA
ATTGCAGTAAGAGAATCACGGGCTCAGGATCTGAGGAATGAGATTCTTAATTCTCAAAAA
TTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAGATCTTTTGAAGCATGATAAGATG
TTAAGCAAGAAAGCACCTGCCCCACACCTACGTGATGTACCTGACTACCTATTGGATCCA
ACAACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTAAT
CCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACA
TTTTCAGCTGAGGCACCTAAGCGAGCAGGGAAAGGTGGGATGAAGAGAAAGGTAAAAGAT
ACTGATAATGGCCATAAACAGTAA