Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054501
CDS Infomation

pacid=37424256 polypeptide=PGSC0003DMP400036673 locus=PGSC0003DMG400021151 ID=PGSC0003DMT400054501.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCTTCAAGAATTACTAGCTGATGAAGGTTTTGAAAGTACTAAAAAAACACCT
GCAAGAACTCATAGAAAAGTTAAGTTCAAAGACAGAGAAGACTCGAACAATATTGCTCTG
CCTATTTACATTTGCCATGACAGAAGATCATCCTTGGATTTCTCCAAGACTAAATCCCGA
AGACCCTTTTCGAGTACTACTTCTTCTGTTCATTCGTCACAAAAATCGAATGTTAAGTCC
ACTCATACTCATGTTGAAGGAAATATTCCAAGAAGAGATGAGCCTGCTATTGATGAAATT
GCTATAAGAGCAGTGATTTCTATACTTAGTGGCTTTGTAGGACAATATTCGAGGGATAAA
GATTTTCGCGAAGCTATTAAGGAGAAATGTTATGCTTGTTTTGTGAGAAAGAAGAATTAT
TCGGATGATGGGATTTTTGCTGATATAGAATTGGCTATTGAGAGTATAGAGAGATTAGTT
GATAGTATTGATGATACTAAAAGGGAAGTTAAAGTTAAGTCATTGCAATACTCTATTAGG
CTATTGACAATTGTGGCATCTTTGAATTCCAATAACTCTGGAAATGCCTCAACTTGTGGA
ATTCCCAATTCTAATCTCTCTGCTTGTGCACAGCTCTACTTATCTATCGTCTACAAGCTC
GAAAAAAATGATAGAATTGCAGCTAGGCATCTCCTTCAGGTGTTTGTTGATTCGCCATAT
CTTGCTCGGACACACTTGCTTCCTGAGCTTTGGGAGCATTTGTTTCTTCCTCACCTTCTT
CATCTCAAGATTTGGCATACACAAGAATTGGAAGTTCTATCGAGTTTGGAATATGCTGAA
AAGGAGAAGCACATGAAGGCCTTAAACAAGCTCTATAATGACCATGTTGATATTGGTACA
ACAAAGTTTGCTCTTTACTATAAACAATGGCTCAAGGTTGGTGCCCAAGCCCCTGCTGTT
CCTTCTGTGCCTTTGCCTTCTAAAGTGGGATATTCGACTTCAAGAAGACGCTCTATGGAT
TCTGTCACTTCCAATTCCTCCGTCAAGAACAACTCATTATATCATGCTGTTTTTGGCCCA
ATTACGGAGAGGAAATCCATGGATGCTGCAAGAAATGGAATTTGGGACTATGAGGAGGAA
GAAAAGGAGAAGATTTCATCCATTGGAGATGACTTAAAGCAAGGCAATTACAGTCCAAAA
AAAACAGTGGTTCATCGAAGATCATCGAGTCAAAGTAATAGAACTCCAAAACATGATCAA
TGGGATCATACTCATAAAAAATCAGACCGCTTCCCGTATTTCAGTTGTCAAAGTGAGCCT
GTGGAGTGCTTGAGAGAAGGAAACAGTAAGATTGGCAGTGTTTCCATCAGAAAGGAAGAA
GAAATCATTCCTTCTGTTTCAAATGATCTAAGTAGAGCTATCTTCGCGATTTGCTCCTCA
GATAGCTTAAGTGAGTGTGAACTGGCCATCCGTTTGGTGGCAAAATCTTGGCTTGATTCT
CATGGAGATCCTGAGACTGTAAAGAGATTGTCCACAGCACCAGTGATCGAAGGAATAATG
AACGTTTTGTTTGCATCCGAAGATGATGAGATCTTGGAACTAGCCATCTCAATCTTAGCA
GAACTAGTGACTAGGAAAGAGACGAATGGACAAATCATTCTGAACTCAGATTCACAGCTT
GATATTTTCTTGAAACTATTGAGAAGTAGCAGCCTGTTTCTCAAGGCTGCAATTCTGCTT
TACCTAGTGCAGCCAAAGGCGAAACAGATGCTATCAATTGAGTGGATTCCATTAGTACTT
CGAGTTTTGGAATTTGCAGATCAGTTGCAGACGTTATTCACGGTTCAACGTAGTCCTCAA
GAGGCAGCATATTACTTGCTTGATCAACTTCTTACTGGTTTTGATGAAGACAAGAATTTT
GAAAATTGTAGGCAAGTCATTTCACTAGGGGGATTGAGCTTGTTGCTCAGACGAGTTGAA
ACAGGAAATGTCTCAGAAAAGAGTAAAGTGGCTTCTGTTATGTACTATTGTGTTCAATCT
GATGGAAGCTGCAGGCATTACCTGGCCAAGAACTTGAATAAAGATTGTCTTCTTCCCCTT
CTATTGCTTCAGAACCAGCACAACACTCGAGGACATGTTTTTGCATTTCTCACCGAGCTT
CTCTGCATCGATAAGCAAATTCAAAGAATAGAATTCTTACGCGGACTACTAAGTGGATGG
GGAATGGTGAACACCTTGCACATTTTGCTACTCTATCTCCAAAGAGCTCAACAAGAAGAA
CGCCCCATTATCTCTGCCATATTGTTACAGCTTGATCTTTTGGGAGATCCGAACGAGTGC
AGTGTGTATAGAGAAGAAGTAATAGAAGAAATAATAAAAGTCCTGGACTGTCAAGTATTC
AATGAAAAAGTCCAAGTACAATCAGCCAGAGCTCTACTTATACTAGGGAGCTGTTTTTCC
TATGCTGGAGAGCCAGTAGTGGAGCAATGTCTGTTAAAAGAAGCAGGCTATGACGAAAAT
GCTGGGGATTCATATCTTGGCAAAAACTTCATCCTTAACAGTTCTACAAACCTGGTAAAT
TCCCCTTCTCATGACCTTTTTTTCATGTTGAACTTTAACCAAAACTCGAATTCACTTAGT
CCTTCAACTAAGTTTCAGAATGAAGAGGAGGAGGCAACAAGAAATTGGCAAAGGAAAACA
GCAATAGTGTTGCTTAACAGTGGAAACAAGAGGCTGTTATCTGGTCTTGTAGATTCAATA
GCCAATGGAATTCCATGTTTAGGAAGAGCAAGCCTAGTTACTGTCACCTGGATGAGCAAT
TTTTTCTGTTTCATTGAGGACAAAGGAGTTCAGTCTTTAGTATATTCGGAGCTGATCCCC
GAACTGATAAAGTTATTGAAGTACAATAATGCTATAGAGGAAAGAGTTCTTGCTTCACTT
TCATTACTCAAACTGGCAAACAATTCAGGTATGGGATTTTGCAAGCTATACTTTAGCTTA
GCCTTGATAAAATTGTATGCTCTACCATTAGAGAAAAGTTACCTTGTTACTTCCATAATA
CCTAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400036673
PEP Infomation

pacid=37424256 transcript=PGSC0003DMT400054501 locus=PGSC0003DMG400021151 ID=PGSC0003DMT400054501.v4.03 annot-version=v4.03
Sequence

MASLQELLADEGFESTKKTPARTHRKVKFKDREDSNNIALPIYICHDRRSSLDFSKTKSR
RPFSSTTSSVHSSQKSNVKSTHTHVEGNIPRRDEPAIDEIAIRAVISILSGFVGQYSRDK
DFREAIKEKCYACFVRKKNYSDDGIFADIELAIESIERLVDSIDDTKREVKVKSLQYSIR
LLTIVASLNSNNSGNASTCGIPNSNLSACAQLYLSIVYKLEKNDRIAARHLLQVFVDSPY
LARTHLLPELWEHLFLPHLLHLKIWHTQELEVLSSLEYAEKEKHMKALNKLYNDHVDIGT
TKFALYYKQWLKVGAQAPAVPSVPLPSKVGYSTSRRRSMDSVTSNSSVKNNSLYHAVFGP
ITERKSMDAARNGIWDYEEEEKEKISSIGDDLKQGNYSPKKTVVHRRSSSQSNRTPKHDQ
WDHTHKKSDRFPYFSCQSEPVECLREGNSKIGSVSIRKEEEIIPSVSNDLSRAIFAICSS
DSLSECELAIRLVAKSWLDSHGDPETVKRLSTAPVIEGIMNVLFASEDDEILELAISILA
ELVTRKETNGQIILNSDSQLDIFLKLLRSSSLFLKAAILLYLVQPKAKQMLSIEWIPLVL
RVLEFADQLQTLFTVQRSPQEAAYYLLDQLLTGFDEDKNFENCRQVISLGGLSLLLRRVE
TGNVSEKSKVASVMYYCVQSDGSCRHYLAKNLNKDCLLPLLLLQNQHNTRGHVFAFLTEL
LCIDKQIQRIEFLRGLLSGWGMVNTLHILLLYLQRAQQEERPIISAILLQLDLLGDPNEC
SVYREEVIEEIIKVLDCQVFNEKVQVQSARALLILGSCFSYAGEPVVEQCLLKEAGYDEN
AGDSYLGKNFILNSSTNLVNSPSHDLFFMLNFNQNSNSLSPSTKFQNEEEEATRNWQRKT
AIVLLNSGNKRLLSGLVDSIANGIPCLGRASLVTVTWMSNFFCFIEDKGVQSLVYSELIP
ELIKLLKYNNAIEERVLASLSLLKLANNSGMGFCKLYFSLALIKLYALPLEKSYLVTSII
PN*

Transcript Sequence

Transcript ID

PGSC0003DMT400054501
Transcript Infomation

pacid=37424256 locus=PGSC0003DMG400021151 ID=PGSC0003DMT400054501.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCTTCAAGAATTACTAGCTGATGAAGGTTTTGAAAGTACTAAAAAAACACCT
GCAAGAACTCATAGAAAAGTTAAGTTCAAAGACAGAGAAGACTCGAACAATATTGCTCTG
CCTATTTACATTTGCCATGACAGAAGATCATCCTTGGATTTCTCCAAGACTAAATCCCGA
AGACCCTTTTCGAGTACTACTTCTTCTGTTCATTCGTCACAAAAATCGAATGTTAAGTCC
ACTCATACTCATGTTGAAGGAAATATTCCAAGAAGAGATGAGCCTGCTATTGATGAAATT
GCTATAAGAGCAGTGATTTCTATACTTAGTGGCTTTGTAGGACAATATTCGAGGGATAAA
GATTTTCGCGAAGCTATTAAGGAGAAATGTTATGCTTGTTTTGTGAGAAAGAAGAATTAT
TCGGATGATGGGATTTTTGCTGATATAGAATTGGCTATTGAGAGTATAGAGAGATTAGTT
GATAGTATTGATGATACTAAAAGGGAAGTTAAAGTTAAGTCATTGCAATACTCTATTAGG
CTATTGACAATTGTGGCATCTTTGAATTCCAATAACTCTGGAAATGCCTCAACTTGTGGA
ATTCCCAATTCTAATCTCTCTGCTTGTGCACAGCTCTACTTATCTATCGTCTACAAGCTC
GAAAAAAATGATAGAATTGCAGCTAGGCATCTCCTTCAGGTGTTTGTTGATTCGCCATAT
CTTGCTCGGACACACTTGCTTCCTGAGCTTTGGGAGCATTTGTTTCTTCCTCACCTTCTT
CATCTCAAGATTTGGCATACACAAGAATTGGAAGTTCTATCGAGTTTGGAATATGCTGAA
AAGGAGAAGCACATGAAGGCCTTAAACAAGCTCTATAATGACCATGTTGATATTGGTACA
ACAAAGTTTGCTCTTTACTATAAACAATGGCTCAAGGTTGGTGCCCAAGCCCCTGCTGTT
CCTTCTGTGCCTTTGCCTTCTAAAGTGGGATATTCGACTTCAAGAAGACGCTCTATGGAT
TCTGTCACTTCCAATTCCTCCGTCAAGAACAACTCATTATATCATGCTGTTTTTGGCCCA
ATTACGGAGAGGAAATCCATGGATGCTGCAAGAAATGGAATTTGGGACTATGAGGAGGAA
GAAAAGGAGAAGATTTCATCCATTGGAGATGACTTAAAGCAAGGCAATTACAGTCCAAAA
AAAACAGTGGTTCATCGAAGATCATCGAGTCAAAGTAATAGAACTCCAAAACATGATCAA
TGGGATCATACTCATAAAAAATCAGACCGCTTCCCGTATTTCAGTTGTCAAAGTGAGCCT
GTGGAGTGCTTGAGAGAAGGAAACAGTAAGATTGGCAGTGTTTCCATCAGAAAGGAAGAA
GAAATCATTCCTTCTGTTTCAAATGATCTAAGTAGAGCTATCTTCGCGATTTGCTCCTCA
GATAGCTTAAGTGAGTGTGAACTGGCCATCCGTTTGGTGGCAAAATCTTGGCTTGATTCT
CATGGAGATCCTGAGACTGTAAAGAGATTGTCCACAGCACCAGTGATCGAAGGAATAATG
AACGTTTTGTTTGCATCCGAAGATGATGAGATCTTGGAACTAGCCATCTCAATCTTAGCA
GAACTAGTGACTAGGAAAGAGACGAATGGACAAATCATTCTGAACTCAGATTCACAGCTT
GATATTTTCTTGAAACTATTGAGAAGTAGCAGCCTGTTTCTCAAGGCTGCAATTCTGCTT
TACCTAGTGCAGCCAAAGGCGAAACAGATGCTATCAATTGAGTGGATTCCATTAGTACTT
CGAGTTTTGGAATTTGCAGATCAGTTGCAGACGTTATTCACGGTTCAACGTAGTCCTCAA
GAGGCAGCATATTACTTGCTTGATCAACTTCTTACTGGTTTTGATGAAGACAAGAATTTT
GAAAATTGTAGGCAAGTCATTTCACTAGGGGGATTGAGCTTGTTGCTCAGACGAGTTGAA
ACAGGAAATGTCTCAGAAAAGAGTAAAGTGGCTTCTGTTATGTACTATTGTGTTCAATCT
GATGGAAGCTGCAGGCATTACCTGGCCAAGAACTTGAATAAAGATTGTCTTCTTCCCCTT
CTATTGCTTCAGAACCAGCACAACACTCGAGGACATGTTTTTGCATTTCTCACCGAGCTT
CTCTGCATCGATAAGCAAATTCAAAGAATAGAATTCTTACGCGGACTACTAAGTGGATGG
GGAATGGTGAACACCTTGCACATTTTGCTACTCTATCTCCAAAGAGCTCAACAAGAAGAA
CGCCCCATTATCTCTGCCATATTGTTACAGCTTGATCTTTTGGGAGATCCGAACGAGTGC
AGTGTGTATAGAGAAGAAGTAATAGAAGAAATAATAAAAGTCCTGGACTGTCAAGTATTC
AATGAAAAAGTCCAAGTACAATCAGCCAGAGCTCTACTTATACTAGGGAGCTGTTTTTCC
TATGCTGGAGAGCCAGTAGTGGAGCAATGTCTGTTAAAAGAAGCAGGCTATGACGAAAAT
GCTGGGGATTCATATCTTGGCAAAAACTTCATCCTTAACAGTTCTACAAACCTGGTAAAT
TCCCCTTCTCATGACCTTTTTTTCATGTTGAACTTTAACCAAAACTCGAATTCACTTAGT
CCTTCAACTAAGTTTCAGAATGAAGAGGAGGAGGCAACAAGAAATTGGCAAAGGAAAACA
GCAATAGTGTTGCTTAACAGTGGAAACAAGAGGCTGTTATCTGGTCTTGTAGATTCAATA
GCCAATGGAATTCCATGTTTAGGAAGAGCAAGCCTAGTTACTGTCACCTGGATGAGCAAT
TTTTTCTGTTTCATTGAGGACAAAGGAGTTCAGTCTTTAGTATATTCGGAGCTGATCCCC
GAACTGATAAAGTTATTGAAGTACAATAATGCTATAGAGGAAAGAGTTCTTGCTTCACTT
TCATTACTCAAACTGGCAAACAATTCAGGTATGGGATTTTGCAAGCTATACTTTAGCTTA
GCCTTGATAAAATTGTATGCTCTACCATTAGAGAAAAGTTACCTTGTTACTTCCATAATA
CCTAATTAA