Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054479
CDS Infomation

pacid=37427588 polypeptide=PGSC0003DMP400036654 locus=PGSC0003DMG400021143 ID=PGSC0003DMT400054479.v4.03 annot-version=v4.03
Sequence

ATGTCAGGTTCATGGAGCAAACTCCAAAAAGCGCTTTCGTTTAGGCAACCTAAATCTCCT
CCAGAAAATGCATCCTCTGATGCCAAATCGCCACCGTCCACTCGGCCGTCCTCCGTTGCA
TCTTCATCCACTTTCTCCCGTTTCACCAGAAGTTTCAGTAGTACCTCCCGATCCTCTAAG
CGAACATGTGCCATTTGCCTTGGGAGTATGAAAGCAGGGAATGGTCAGGCGATATTCACT
GCTGAATGCGCCCACTCATTCCACTTTAGCTGCATTGCCAACAGTGTTAAGCATGGAAAC
TACCTCTGCCCCATCTGCAGATGCAAATGGAAAGAGATTCCTCTCATGTCGTCCTTCAGT
ACTGATGTAAACACTAATAATGCTGGGCGGACTCGTGTCTCTCCACTTGAAGATAATTAC
CTTGACAACATTCCTCGTGTTCCACCACCCGTGTCTCTGCCCCTTCCTGAGCCCCTTCAC
TTCTCTGATGATGAACATCTTCCCAGCATCACTGTGGATCAGACCCCCTCCCCTTCCACA
GTTCATCCAGAGACTGCTGTCTTGAAAGCTTTTCCTGAATATTCTGCAGTTGCTGCTTCT
GGAAGTATGTCAAGATTTGCTGTTCTTGTTGGAGTAAGGGCACCCCCACTTGCTGATGAT
GTTCGGCACCAAGAGCGTGCACCTATTGACCTGGTCACAGTTCTAGATATTAGTGGCAGC
ATGGCTGGATCAAAATTGACTCTCTTGAAACAAGCAGTTTGTTTTGTCATAGATAACTTG
GGGCCTTCTGACCGTCTATCTATTGTTACCTTTTCATCAGGAGCTCAAAGAAACTTCCCC
TTGCGAAGGATGACAGAACAGGGGCGTAGAGAGGCTGCACTGGCTGTCAATGCCATTTCA
GCAAATGGTGGGACAAATATCGTGGAAGGACTCAAGAAGGGGGTTCGGGTTCTTGAAGAA
AGACGTGAAAGGAACCCAGTTGCAAGCATTGTTCTCTTGTCAGATGGGAGAGACACCTAT
AACGGTGATAATGCCAACCAACGGCGGAGTCCTCGGAACCGCAGATCCTCTAATGCAACC
TCAGGTCCCGACTTTCTGAATCTATTGCCTTCTTCCATTTGTCCTCGCAATAGAGAAGGA
CTAGCAGCAGGACAGCTGCCAACTTTCCATGTACATACGTTTGGATTTGGTTTAGACCAT
GATTCCTCTGCTATGCATGCTATCTCAGATGCATCAGGTGGTACATTTTCGTTCATTGAG
ACTGTTGGTACTGTTCAAGATGCCTTTGCAATGTGTATTGGTGGTCTCCTCAGTGTTGTA
GTCCAGGAACTCAAGCTTACTGTTCGGTCAGCATCACGTGGAGTAGAAATTGGATCCATT
CCTTCAGGAAGATATGCAAGTGAAATTTCTGAACAGGGAAAGCAAGGGGTAATAAACATT
GGAAACCTGTATGCAGATGAGGAAAAAGAATTCCTTGTCTACTTGTCTGTTCCCTCAGCT
GAAATTGAGCAAGGCGCAACAAAGACATCTCTGTTGCAAATTACATGTAGTTACAAGAAT
ACCACATCGGAAGAGATGGTCAGTGTGGAGGGTGAGACAGTTGAGATACGTCGGCCACCA
GTGCTGTCTCCTACAGATGTGGTAATAAGTTGTGAGGTTGATAGGCAGATAAACAGGCTG
GCAGTAGCAGAAACCATTGCAGAGGCACAACAATTGGCAGAAATGGGAAATCTTGAGGCT
GCTCAAGCCGCGCTAACTAACCGAAGAGCCACTCTTCTATCTTCTGTATCTGCTCAAGCA
GGCGATGCTCTCTGTAGCTGGCTTGACATGGAATTGACTGAAGTCAGAGAGAGGATGGTA
AGCAGGGAGCGCTATGAACAAACTGGACGAGCTTACGTCCTCTCAGGTTTGAGCTCACAT
TCTTGGCAAAGAGCGACAACTAGAGGAGACACGACATCACAAATATTACTGCAAGGTGGT
AGCTCAAGCAATAGTGGCGCCGCCATGTATGAAACTCCATCTATGGTCAGCATGATCTCA
AAGTCACAGAACCTAAGTCTTGTTAATCGCGCTGAACAAGTTCATCGCCCCAACAAGTCA
TGCAACTTACCTCCTCCACCATCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400036654
PEP Infomation

pacid=37427588 transcript=PGSC0003DMT400054479 locus=PGSC0003DMG400021143 ID=PGSC0003DMT400054479.v4.03 annot-version=v4.03
Sequence

MSGSWSKLQKALSFRQPKSPPENASSDAKSPPSTRPSSVASSSTFSRFTRSFSSTSRSSK
RTCAICLGSMKAGNGQAIFTAECAHSFHFSCIANSVKHGNYLCPICRCKWKEIPLMSSFS
TDVNTNNAGRTRVSPLEDNYLDNIPRVPPPVSLPLPEPLHFSDDEHLPSITVDQTPSPST
VHPETAVLKAFPEYSAVAASGSMSRFAVLVGVRAPPLADDVRHQERAPIDLVTVLDISGS
MAGSKLTLLKQAVCFVIDNLGPSDRLSIVTFSSGAQRNFPLRRMTEQGRREAALAVNAIS
ANGGTNIVEGLKKGVRVLEERRERNPVASIVLLSDGRDTYNGDNANQRRSPRNRRSSNAT
SGPDFLNLLPSSICPRNREGLAAGQLPTFHVHTFGFGLDHDSSAMHAISDASGGTFSFIE
TVGTVQDAFAMCIGGLLSVVVQELKLTVRSASRGVEIGSIPSGRYASEISEQGKQGVINI
GNLYADEEKEFLVYLSVPSAEIEQGATKTSLLQITCSYKNTTSEEMVSVEGETVEIRRPP
VLSPTDVVISCEVDRQINRLAVAETIAEAQQLAEMGNLEAAQAALTNRRATLLSSVSAQA
GDALCSWLDMELTEVRERMVSRERYEQTGRAYVLSGLSSHSWQRATTRGDTTSQILLQGG
SSSNSGAAMYETPSMVSMISKSQNLSLVNRAEQVHRPNKSCNLPPPPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400054479
Transcript Infomation

pacid=37427588 locus=PGSC0003DMG400021143 ID=PGSC0003DMT400054479.v4.03 annot-version=v4.03
Sequence

ATGTCAGGTTCATGGAGCAAACTCCAAAAAGCGCTTTCGTTTAGGCAACCTAAATCTCCT
CCAGAAAATGCATCCTCTGATGCCAAATCGCCACCGTCCACTCGGCCGTCCTCCGTTGCA
TCTTCATCCACTTTCTCCCGTTTCACCAGAAGTTTCAGTAGTACCTCCCGATCCTCTAAG
CGAACATGTGCCATTTGCCTTGGGAGTATGAAAGCAGGGAATGGTCAGGCGATATTCACT
GCTGAATGCGCCCACTCATTCCACTTTAGCTGCATTGCCAACAGTGTTAAGCATGGAAAC
TACCTCTGCCCCATCTGCAGATGCAAATGGAAAGAGATTCCTCTCATGTCGTCCTTCAGT
ACTGATGTAAACACTAATAATGCTGGGCGGACTCGTGTCTCTCCACTTGAAGATAATTAC
CTTGACAACATTCCTCGTGTTCCACCACCCGTGTCTCTGCCCCTTCCTGAGCCCCTTCAC
TTCTCTGATGATGAACATCTTCCCAGCATCACTGTGGATCAGACCCCCTCCCCTTCCACA
GTTCATCCAGAGACTGCTGTCTTGAAAGCTTTTCCTGAATATTCTGCAGTTGCTGCTTCT
GGAAGTATGTCAAGATTTGCTGTTCTTGTTGGAGTAAGGGCACCCCCACTTGCTGATGAT
GTTCGGCACCAAGAGCGTGCACCTATTGACCTGGTCACAGTTCTAGATATTAGTGGCAGC
ATGGCTGGATCAAAATTGACTCTCTTGAAACAAGCAGTTTGTTTTGTCATAGATAACTTG
GGGCCTTCTGACCGTCTATCTATTGTTACCTTTTCATCAGGAGCTCAAAGAAACTTCCCC
TTGCGAAGGATGACAGAACAGGGGCGTAGAGAGGCTGCACTGGCTGTCAATGCCATTTCA
GCAAATGGTGGGACAAATATCGTGGAAGGACTCAAGAAGGGGGTTCGGGTTCTTGAAGAA
AGACGTGAAAGGAACCCAGTTGCAAGCATTGTTCTCTTGTCAGATGGGAGAGACACCTAT
AACGGTGATAATGCCAACCAACGGCGGAGTCCTCGGAACCGCAGATCCTCTAATGCAACC
TCAGGTCCCGACTTTCTGAATCTATTGCCTTCTTCCATTTGTCCTCGCAATAGAGAAGGA
CTAGCAGCAGGACAGCTGCCAACTTTCCATGTACATACGTTTGGATTTGGTTTAGACCAT
GATTCCTCTGCTATGCATGCTATCTCAGATGCATCAGGTGGTACATTTTCGTTCATTGAG
ACTGTTGGTACTGTTCAAGATGCCTTTGCAATGTGTATTGGTGGTCTCCTCAGTGTTGTA
GTCCAGGAACTCAAGCTTACTGTTCGGTCAGCATCACGTGGAGTAGAAATTGGATCCATT
CCTTCAGGAAGATATGCAAGTGAAATTTCTGAACAGGGAAAGCAAGGGGTAATAAACATT
GGAAACCTGTATGCAGATGAGGAAAAAGAATTCCTTGTCTACTTGTCTGTTCCCTCAGCT
GAAATTGAGCAAGGCGCAACAAAGACATCTCTGTTGCAAATTACATGTAGTTACAAGAAT
ACCACATCGGAAGAGATGGTCAGTGTGGAGGGTGAGACAGTTGAGATACGTCGGCCACCA
GTGCTGTCTCCTACAGATGTGGTAATAAGTTGTGAGGTTGATAGGCAGATAAACAGGCTG
GCAGTAGCAGAAACCATTGCAGAGGCACAACAATTGGCAGAAATGGGAAATCTTGAGGCT
GCTCAAGCCGCGCTAACTAACCGAAGAGCCACTCTTCTATCTTCTGTATCTGCTCAAGCA
GGCGATGCTCTCTGTAGCTGGCTTGACATGGAATTGACTGAAGTCAGAGAGAGGATGGTA
AGCAGGGAGCGCTATGAACAAACTGGACGAGCTTACGTCCTCTCAGGTTTGAGCTCACAT
TCTTGGCAAAGAGCGACAACTAGAGGAGACACGACATCACAAATATTACTGCAAGGTGGT
AGCTCAAGCAATAGTGGCGCCGCCATGTATGAAACTCCATCTATGGTCAGCATGATCTCA
AAGTCACAGAACCTAAGTCTTGTTAATCGCGCTGAACAAGTTCATCGCCCCAACAAGTCA
TGCAACTTACCTCCTCCACCATCCTAG